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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

PGF Gene

protein-coding   GIFtS: 66
GCID: GC14M075408

placental growth factor

(Previous names: placental growth factor-like, placental growth factor,...)
(Previous symbol: PGFL)
 Explore 91 diseases affiliated with
PGF via our new
 Human Malady Compendium 
Biological research products
for PGF
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Placental Growth Factor1 2     SHGC-107601 2
PLGF1 2 3 5     Placental Growth Factor, Vascular Endothelial Growth Factor-Related Protein1 2
PGFL1 2 3     PlGF1 3
D12S19001 2     Placental Growth Factor-Like1
PlGF-21 2     Placenta Growth Factor2

External Ids:    HGNC: 88931   Entrez Gene: 52282   Ensembl: ENSG000001196307   OMIM: 6011215   UniProtKB: P497633   

Export aliases for PGF gene to outside databases

Previous GC identifers: GC14M072935 GC14M069225 GC14M073398 GC14M074478 GC14M055576


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for PGF:
This gene encodes a growth factor found in placenta which is homologous to vascular endothelial growth factor.
Alternatively spliced transcripts encoding different isoforms have been found for this gene.(provided by RefSeq, Jun
2011)

UniProtKB/Swiss-Prot: PLGF_HUMAN, P49763
Function: Growth factor active in angiogenesis and endothelial cell growth, stimulating their proliferation and
migration. It binds to the receptor FLT1/VEGFR-1. Isoform PlGF-2 binds NRP1/neuropilin-1 and NRP2/neuropilin-2 in a
heparin-dependent manner. Also promotes cell tumor growth

Gene Wiki entry for PGF (Placental growth factor)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000014.8  NC_018925.1  NT_026437.12  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the PGF gene promoter:
         PPAR-gamma1   p53   STAT3   PPAR-gamma2   NF-kappaB1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidPGF promoter sequence
   Search SABiosciences Chromatin IP Primers for PGF

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PGF


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 14q24.3   Ensembl cytogenetic band:  14q24.3   HGNC cytogenetic band: 14q24.3

PGF Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
PGF gene location

GeneLoc information about chromosome 14         GeneLoc Exon Structure

GeneLoc location for GC14M075408:  view genomic region     (about GC identifiers)

Start:
75,408,537 bp from pter      End:
75,422,487 bp from pter
Size:
13,951 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: PLGF_HUMAN, P49763 (See protein sequence)
Recommended Name: Placenta growth factor precursor  
Size: 221 amino acids; 24789 Da
Subunit: Antiparallel homodimer; disulfide-linked. Also found as heterodimer with VEGFA/VEGF. Isoform PlGF-3 is found
both as homodimer and as monomer
Subcellular location: Secreted. Note=The three isoforms are secreted but PlGF-2 appears to remain cell attached unless
released by heparin
2 PDB 3D structures from and Proteopedia for PGF:
1FZV (3D)        1RV6 (3D)    
Secondary accessions: Q07101 Q9BV78 Q9Y6S8
Alternative splicing: 3 isoforms:  P49763-1   P49763-2   P49763-3   

Explore the universe of human proteins at neXtProt for PGF: NX_P49763

Post-translational modifications:

  • N-glycosylated1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P49763

  • PGF Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_001193941.1  NP_002623.2  

    ENSEMBL proteins: 
     ENSP00000451040   ENSP00000451413   ENSP00000238607   ENSP00000385365  
    Reactome Protein details: P49763
    Human Recombinant Protein Products: 
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    ProSpec Recombinant Protein for PGF
    Uscn Proteins for PGF

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005576extracellular region TAS--
    GO:0005615extracellular space IEA--
    GO:0016020membrane IEA--


    PGF for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for PGF


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    PGF for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR023581 PD_growth_factor_CS
     IPR000072 PD_growth_factor

    Graphical View of Domain Structure for InterPro Entry P49763

    ProtoNet protein and cluster: P49763

    1 Blocks protein family: IPB000072 Platelet-derived growth factor (PDGF)

    UniProtKB/Swiss-Prot: PLGF_HUMAN, P49763
    Domain: Isoform PlGF-2 contains a basic insert which acts as a cell retention signal
    Similarity: Belongs to the PDGF/VEGF growth factor family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: PLGF_HUMAN, P49763
    Function: Growth factor active in angiogenesis and endothelial cell growth, stimulating their proliferation and
    migration. It binds to the receptor FLT1/VEGFR-1. Isoform PlGF-2 binds NRP1/neuropilin-1 and NRP2/neuropilin-2 in a
    heparin-dependent manner. Also promotes cell tumor growth

         Genatlas biochemistry entry for PGF:
    placenta growth factor,angiogenic,vascular endothelial growth factor related

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    hsa-miR-4291 hsa-miR-4272 hsa-miR-449a hsa-miR-520a-5p hsa-miR-124 hsa-miR-149 hsa-miR-506 hsa-miR-3121-3p
    SwitchGear 3'UTR luciferase reporter plasmidPGF 3' UTR sequence
    Inhib. RNA
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    Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0008083growth factor activity IMP--
    GO:0008201heparin binding IEA--
    GO:0042803protein homodimerization activity IEA--
    GO:0046982protein heterodimerization activity IEA--


    PGF for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for PGF:
     Increased G1 DNA content 

    Animal Models:
         Mouse knock-out Pgftm1Pec for PGF
         10 MGI mutant phenotypes (inferred from 1 allele(MGI details for Pgf):
     adipose tissue  cardiovascular system  embryogenesis  growth/size  homeostasis/metabolism 
     immune system  integument  respiratory system  tumorigenesis  vision/eye 

    PGF for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/23 super-pathways (see all 23About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Apoptotic Pathways in Synovial Fibroblasts
    8/14 pathways (see all 14)
    Apoptotic Pathways in Synovial Fibroblasts1.00
    ERK5 Signaling0.61
    p53 Mediated Apoptosis0.84
    eIF2 Pathway0.60
    Mitochondrial Apoptosis0.73
    Rac1 Pathway0.58
    Telomerase Components in Cell Signaling0.72
    Nuclear Receptor Activation by Vitamin-A0.57
    2GPCR Pathway
    GPCR Pathway1.00
    Estrogen Pathway0.55
    Ras Pathway0.62
    Pancreatic Adenocarcinoma0.55
    Breast Cancer Regulation by Stathmin10.58
    Paxillin Interactions0.53
    NFAT in Immune Response0.58
    3Rho Family GTPases
    Rho Family GTPases1.00
    MAPK Signaling0.51
    ERK Signaling0.61
    ILK Signaling0.45
    Molecular Mechanisms of Cancer0.51
    4TGF-Beta Pathway
    TGF-Beta Pathway1.00
    JAK-STAT Pathway0.57
    MAPK Family Pathway0.60
    JNK Pathway0.50
    5Nanog in Mammalian ESC Pluripotency
    Nanog in Mammalian ESC Pluripotency1.00
    14-3-3 Induced Intracellular Signaling0.59
    GSK3 Signaling0.61
    eNOS Signaling0.48

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for PGF
        Development VEGF-family signaling

    5/55 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for PGF (see all 55)
        Nuclear Receptor Activation by Vitamin-A
    Paxillin Interactions
    Telomerase Components in Cell Signaling
    Mitochondrial Apoptosis
    Molecular Mechanisms of Cancer

    1 GeneGo (Thomson Reuters) Pathway for PGF
        Development VEGF-family signaling

    2 BioSystems Pathways for PGF 
        Focal Adhesion
    VEGFR1 specific signals

    4        Reactome Pathways for PGF
        Signaling by VEGF
    VEGF binds to VEGFR leading to receptor dimerization
    VEGF ligand-receptor interactions
    Signal Transduction


    5/7         Kegg Pathways  (Kegg details for PGF) (see all 7):
        mTOR signaling pathway
    Focal adhesion
    Pathways in cancer
    Renal cell carcinoma
    Pancreatic cancer


    PGF for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PGF

    STRING Interaction Network Preview (showing 5 interactants - click image to see 15)

    5/17 Interacting proteins for PGF (P497633 ENSP000002386074) via UniProtKB, MINT, STRING, and/or I2D (see all 17)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    FLT1P179483, ENSP000002823974I2D: score=6 STRING: ENSP00000282397
    NRP2O604623, ENSP000003535824I2D: score=3 STRING: ENSP00000353582
    VEGFAP156923, ENSP000003611254I2D: score=3 STRING: ENSP00000361125
    NRP1O147863, ENSP000002653714I2D: score=2 STRING: ENSP00000265371
    NFICP086513I2D: score=1 
    About this table

    Gene Ontology (GO): 5/17 biological process terms (GO ID links to tree view) (see all 17):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001525angiogenesis ----
    GO:0001658branching involved in ureteric bud morphogenesis IEA--
    GO:0001666response to hypoxia IEA--
    GO:0001938positive regulation of endothelial cell proliferation IEA--
    GO:0002040sprouting angiogenesis IEA--


    PGF for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    PGF for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for PGF
    10/21 Novoseek chemical compound relationships for PGF gene (see all 21)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    vegf 89.6 529 10606981 (9), 16814647 (8), 11254400 (6), 11470864 (5) (see all 99)
    tyrosine 69.7 100 19943826 (7), 8919031 (1), 15284201 (1), 15886253 (1) (see all 80)
    sunitinib 41 3 19513511 (1), 17605814 (1), 18669461 (1)
    matrigel 23.1 1 12673673 (1)
    pd 98,059 22.2 4 19035132 (1), 17028267 (1), 18558410 (1)
    heparin 21.5 18 10527820 (3), 8148155 (2), 9712843 (1), 12613545 (1) (see all 9)
    nitric oxide 7.95 17 17028267 (4), 19035132 (2), 11750869 (1), 18558410 (1) (see all 9)
    wortmannin 5.61 3 12689930 (1), 18558410 (1)
    oxygen 4.94 18 15284201 (3), 7541940 (2), 17956952 (2), 19712973 (2) (see all 8)
    lipid 1.72 1 17159877 (1)

    Search CenterWatch for drugs/clinical trials and news about PGF / PLGF 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for PGF gene (2 alternative transcripts): 
    NM_001207012.1  NM_002632.5  

    Unigene Cluster for PGF:

    Placental growth factor
    Hs.252820  [show with all ESTs]
    Unigene Representative Sequence: AK023843
    9 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000555567(uc001xqz.3 uc001xrb.3) ENST00000553716 ENST00000238607
    ENST00000557748 ENST00000405431 ENST00000555253 ENST00000555077 ENST00000556939(uc010ase.2 uc010asf.2)
    ENST00000555234

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    hsa-miR-4291 hsa-miR-4272 hsa-miR-449a hsa-miR-520a-5p hsa-miR-124 hsa-miR-149 hsa-miR-506 hsa-miR-3121-3p
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    Additional cDNA sequence: 

    AK023843.1 AK057973.1 AK309886.1 AK310608.1 AK310886.1 BC001422.2 BC007255.1 BC007789.2 
    BT007182.1 BX248289.1 S72960.1 X54936.1 

    8 DOTS entries:

    DT.454164  DT.100787535  DT.91997668  DT.120764292  DT.100025837  DT.75161740  DT.100807163  DT.95275183 

    24/201 AceView cDNA sequences (see all 201):

    AI220900 CR592863 BQ647895 R66396 T53764 BU150305 CR598213 CR593571 
    AI379465 BQ070531 BQ014455 AA299697 BQ893335 BX248289 CR611238 CR593434 
    AL543185 AA987436 T54157 CF529499 AW771163 AA369322 BE301780 CR625775 

    GeneLoc Exon Structure

    3 Alternative Splicing Database (ASD) splice patterns (SP) for PGF    About this scheme

    ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6 ^ 7
    SP1:              -                                       
    SP2:              -                                       
    SP3:                                                      


    ECgene alternative splicing isoforms for PGF

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    PGF expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CAGCTCCTAA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    PGF expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    4 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    PlacentaChorionic VillusVillous Cytotrophoblast CellsExtraembryonic Tissues, Placenta
    Head MesenchymeBranchial Arch 1Paraxial Mesoderm CellsBone, Skeletal Muscle
    BoneMandibular ProcessBone
    BoneZeugopod PeriosteumBone
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 7 LifeMap Cells 
    NameCategory
    PureStem™ endothelial progenitor 30-SM2-1 (Embryonic Progenitor Cell)Endothelium
    PureStem™ progenitor EN13 (Embryonic Progenitor Cell)
    Syncytiotrophoblast-like cells (Generation of syncyt...)
    Primitive gut tube-like cells (A scalable, suspensi...)
    HyStem+BMP4-induced SK11 cells (HyStem+BMP4 inductio...)Bone, Cartilage
    HyStem+BMP4-induced SM30 cells (HyStem+BMP4 inductio...)Adipose, Bone, Cartilage
    HyStem+BMP4-induced E15 cells (HyStem+BMP4 inductio...)Adipose, Bone, Cartilage

    See PGF Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for PGF

    SOURCE GeneReport for Unigene cluster: Hs.252820

    UniProtKB/Swiss-Prot: PLGF_HUMAN, P49763
    Tissue specificity: While the three isoforms are present in most placental tissues, PlGF-2 is specific to early (8
    week) placenta and only PlGF-1 is found in the colon and mammary carcinomas

        SABiosciences Expression via Pathway-Focused PCR Arrays including PGF (see all 7): 
              Growth Factors in human mouse rat
              Endothelial Cell Biology in human mouse rat
              Angiogenic Growth Factors in human mouse rat
              Cancer PathwayFinder in human mouse rat
              VEGF Signaling in human mouse rat

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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PGF

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for PGF gene from 2/8 species (see all 8)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves LOC7718321 placenta growth factor-like 71.17(n)
    55.86(a)
      771832  XM_001235058.2  XP_001235059.2 
    zebrafish
    (Danio rerio)
    Actinopterygii LOC5574681 placenta growth factor-like 60.69(n)
    53.1(a)
      557468  XM_680548.4  XP_685640.4 


    ENSEMBL Gene Tree for PGF (if available)
    TreeFam Gene Tree for PGF (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for PGF gene
    VEGFC2  FIGF2  VEGFA2  VEGFB2  
    3 SIMAP similar genes for PGF using alignment to 3 protein entries:     PLGF_HUMAN (see all proteins):
    VEGF    VEGFA    VEGFB

    PGF for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/328 NCBI SNPs in PGF are shown (see all 328    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 14 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs617594131,2
    C,F,--55576442(-) TCTCCG/AAGCCT 2 -- ds50013Minor allele frequency- A:0.03NS WA 210
    rs1134439611,2
    --55576470(+) TGTTAC/TACCCC 2 -- ds50011Minor allele frequency- T:0.50CSA 2
    rs617594121,2
    C,F,--55576508(-) TGTCAG/TCCGGG 2 -- ds50013Minor allele frequency- T:0.03NS WA 210
    rs617594111,2
    C,F,--55576676(-) TGTGCG/ATCCCA 2 -- ut314Minor allele frequency- A:0.12NS CSA WA 212
    rs10428861,2
    C,F,A,H,--55576780(-) CCCCCA/C/GCTAAG 4 -- ut3118NS EA NA CSA WA 1962
    rs81851,2
    C,F,A,H,--55576802(-) CGGCCA/GAGGTG 2 -- ut3134Minor allele frequency- G:0.26MN NA EA NS WA CSA 3595
    rs617594101,2
    C,--55576806(-) TTTCCG/AGCCAA 2 -- ut313Minor allele frequency- A:0.02NS WA 204
    rs413043631,2
    C,--55576991(+) AGGCCG/ATGGCG 2 -- ut314Minor allele frequency- A:0.01NA NS 98
    rs2016503281,2
    C--55577021(-) CCAAAA/GTAGGG 2 -- ut310--------
    rs101379361,2
    C,F,A,H,--55577184(+) TTCTTT/CCAAAG 2 -- ut3113Minor allele frequency- C:0.03NS EA NA WA 1500

    HapMap Linkage Disequilibrium report for PGF (75408537 - 75422487 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for PGF: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing PGF
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    PGF for disorders           About GeneDecksing

    OMIM gene information: 601121    OMIM disorders: --

    20/91 diseases for PGF (see all 91):    About MalaCards
    severe pre-eclampsia    pre-eclampsia    middle ear cholesteatoma    placental insufficiency
    critical limb ischemia    intermittent claudication    myocardial infarction    placental abruption
    acute myocardial infarction    malignant pleural mesothelioma    ectopic pregnancy    proliferative diabetic retinopathy
    myxoid liposarcoma    diabetic retinopathy    sickle cell disease    insulin resistance
    sickle cell anemia    ischemic heart disease    lymphoblastic leukemia    systemic lupus erythematosus

    4 diseases from the University of Copenhagen DISEASES database for PGF:
    Hypertension     Endometritis     Proteinuria     Cancer

    10/48 Novoseek disease relationships for PGF gene (see all 48)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    preeclampsia 86.7 255 17460385 (7), 17403407 (7), 15117604 (6), 15632339 (6) (see all 87)
    neovascularization 70.1 24 12714333 (1), 16754748 (1), 19505392 (1), 15312686 (1) (see all 20)
    intrauterine growth retardation 62.2 4 19536710 (1), 19996864 (1), 15591804 (1), 18058842 (1)
    pregnancy complications 56.4 2 19536710 (1), 18175241 (1)
    proteinuria 50.1 10 19165674 (2), 15632339 (2), 15117604 (1), 17553534 (1) (see all 5)
    severe pre-eclampsia 48.8 1 15938782 (1)
    sickle cell disease 39.7 3 20351105 (1), 20040765 (1), 19010294 (1)
    tumors 35.1 84 12673673 (5), 19805167 (4), 16618713 (4), 7478581 (4) (see all 39)
    systemic hypertension 34.2 5 17371983 (1), 15663401 (1), 16711023 (1), 18648513 (1) (see all 5)
    inflammation 33.6 29 16412852 (3), 18411415 (2), 17157858 (2), 19010294 (2) (see all 19)

    Human Genome Epidemiology (HuGE) Navigator: PGF (3 documents)

    Export disorders for PGF gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for PGF gene, integrated from 9 sources (see all 445):
    (articles sorted by number of sources associating them with PGF)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Two alternative mRNAs coding for the angiogenic factor, placenta growth factor (PlGF), are transcribed from a single gene of chromosome 14. (PubMed id 7681160)1, 2, 3, 9 Maglione D.... Persico M.G. (1993)
    2. A heparin-binding form of placenta growth factor (PlGF-2) is expressed in human umbilical vein endothelial cells and in placenta. (PubMed id 8148155)1, 2, 9 Hauser S.D. and Weich H.A. (1993)
    3. Isolation of a human placenta cDNA coding for a protein related to the vascular permeability factor. (PubMed id 1924389)1, 2, 9 Maglione D.... Persico M.G. (1991)
    4. HRG inhibits tumor growth and metastasis by inducing macrophage polarization and vessel normalization through downregulation of PlGF . (PubMed id 21215706)1, 2 Rolny C....Carmeliet P. (2011)
    5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    6. The DNA sequence and analysis of human chromosome 14. (PubMed id 12508121)1, 2 Heilig R.... Weissenbach J. (2003)
    7. The crystal structure of human placenta growth factor-1 (PlGF-1), an angiogenic protein, at 2.0 A resolution. (PubMed id 11069911)1, 2 Iyer S.... Acharya K.R. (2001)
    8. Placenta growth factor: identification and characterization of a novel isoform generated by RNA alternative splicing. (PubMed id 9207183)1, 2 Cao Y.... Cao Y. (1997)
    9. Placenta growth factor. Potentiation of vascular endothelial growth factor bioactivity, in vitro and in vivo, and high affinity binding to Flt-1 but not to Flk-1/KDR. (PubMed id 7929268)1, 2 Park J.E.... Ferrara N. (1994)
    10. Serum sFlt1:PlGF ratio, PlGF, and soluble endoglin levels in gestational proteinuria. (PubMed id 19165674)1, 9 Ohkuchi A....Suzuki M. (2009)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 5228 HGNC: 8893 AceView: PGF Ensembl:ENSG00000119630 euGenes: HUgn5228
    ECgene: PGF Kegg: 5228 H-InvDB: PGF

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for PGF Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for PGF Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for PGF gene:
    Search GeneIP for patents involving PGF

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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