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PGAP2 Gene

protein-coding   GIFtS: 46
GCID: GC11P003818

Post-GPI Attachment To Proteins 2

(Previous names: mental retardation, non-syndromic, autosomal recessive,...)
(Previous symbol: MRT21)
  See PGAP2-related diseases
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
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Aliases
Post-GPI Attachment To Proteins 21 2     HPMRS32 5
MRT211 2 5     MRT172 5
FRAG12 3 5     Cell Wall Biogenesis 43 N-Terminal Homolog (S. Cerevisiae)1
Mental Retardation, Non-Syndromic, Autosomal Recessive, 211 2     CWH43-N2
FGF Receptor Activating Protein 11 2     Cell Wall Biogenesis 43 N-Terminal Homolog2
FGF Receptor-Activating Protein 12 3     Post-GPI Attachment To Proteins Factor 22

External Ids:    HGNC: 178931   Entrez Gene: 273152   Ensembl: ENSG000001489857   OMIM: 6151875   UniProtKB: Q9UHJ93   

Export aliases for PGAP2 gene to outside databases

Previous GC identifers: GC11P003787 GC11P003552


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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GeneCards Summary for PGAP2 Gene:
PGAP2 (post-GPI attachment to proteins 2) is a protein-coding gene. Diseases associated with PGAP2 include hyperphosphatasia with mental retardation syndrome 3, and hyperphosphatasia with mental retardation syndrome. GO annotations related to this gene include protein transporter activity.

UniProtKB/Swiss-Prot: PGAP2_HUMAN, Q9UHJ9
Function: Involved in the lipid remodeling steps of GPI-anchor maturation. Required for stable expression of
GPI-anchored proteins at the cell surface (By similarity)




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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RefSeq DNA sequence at NCBI GenBank:
NC_000011.9  NT_009237.19  NC_018922.2  
Regulatory elements:
   Search for regulatory transcription factor binding sites for PGAP2
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidPGAP2 promoter sequence
   Search Chromatin IP Primers for PGAP2

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat PGAP2


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 11p15.5   Ensembl cytogenetic band:  11p15.4   HGNC cytogenetic band: 11p15.4

PGAP2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
PGAP2 gene location

GeneLoc information about chromosome 11         GeneLoc Exon Structure

GeneLoc location for GC11P003818:  view genomic region     (about GC identifiers)

Start:
3,818,954 bp from pter      End:
3,847,601 bp from pter
Size:
28,648 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, Cloud-Clone Corp., and/or eBioscience,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, Cloud-Clone Corp., and/or eBioscience, Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, Cloud-Clone Corp, and/or others.)
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UniProtKB/Swiss-Prot: PGAP2_HUMAN, Q9UHJ9 (See protein sequence)
Recommended Name: Post-GPI attachment to proteins factor 2  
Size: 254 amino acids; 29400 Da
Subunit: Interacts with PGAP2IP (By similarity)
Secondary accessions: E9PJG5 H7BXL9 Q6UC77 Q96G66 Q9UF01 Q9Y4N1
Alternative splicing: 5 isoforms:  Q9UHJ9-1   Q9UHJ9-2   Q9UHJ9-3   Q9UHJ9-4   Q9UHJ9-5   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for PGAP2: NX_Q9UHJ9

Explore proteomics data for PGAP2 at MOPED


See PGAP2 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

REFSEQ proteins (11 alternative transcripts): 
NP_001138910.1  NP_001243164.1  NP_001243165.1  NP_001243166.1  NP_001243167.1  NP_001243168.1  NP_001243169.1  NP_001269967.1  
NP_001269968.1  NP_001269969.1  NP_055304.1  

ENSEMBL proteins: 
 ENSP00000432215   ENSP00000380183   ENSP00000300730   ENSP00000431691   ENSP00000432160  
 ENSP00000432123   ENSP00000433377   ENSP00000433748   ENSP00000434772   ENSP00000434088  
 ENSP00000435703   ENSP00000434631   ENSP00000434419   ENSP00000437203   ENSP00000435799  
 ENSP00000434401   ENSP00000431851   ENSP00000278243   ENSP00000435223   ENSP00000435338  
 ENSP00000432721   ENSP00000434507   ENSP00000380190   ENSP00000380188  

PGAP2 Human Recombinant Protein Products:

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Search eBioscience for ELISAs for PGAP2 


(According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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1 InterPro protein domain:
 IPR019402 Frag1/DRAM/Sfk1

Graphical View of Domain Structure for InterPro Entry Q9UHJ9

ProtoNet protein and cluster: Q9UHJ9

UniProtKB/Swiss-Prot: PGAP2_HUMAN, Q9UHJ9
Similarity: Belongs to the PGAP2 family


Find genes that share domains with PGAP2           About GenesLikeMe


(According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, Vector BioLabs and/or Addgene, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Flow cytometry from eBioscience, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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Molecular Function:

     UniProtKB/Swiss-Prot Summary: PGAP2_HUMAN, Q9UHJ9
Function: Involved in the lipid remodeling steps of GPI-anchor maturation. Required for stable expression of
GPI-anchored proteins at the cell surface (By similarity)

     Gene Ontology (GO): 2 molecular function terms:    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0005515protein binding ----
GO:0008565protein transporter activity ISS--
     
Find genes that share ontologies with PGAP2           About GenesLikeMe


Phenotypes:
     3 GenomeRNAi human phenotypes for PGAP2:
 Decreased homologous recombina  Decreased nuclei size in G2M  Synthetic lethal with imatinib 

Animal Models:
   inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for PGAP2
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   genOway customized Knockin model: humanization, point mutation, expression monitoring, etc. for PGAP2

miRNA
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Block miRNA regulation of human, mouse, rat PGAP2 using miScript Target Protectors
Selected qRT-PCR Assays for microRNAs that regulate PGAP2 (see all 18):
hsa-miR-29a hsa-miR-29c hsa-miR-578 hsa-miR-1285 hsa-miR-449a hsa-miR-4314 hsa-miR-3613-3p hsa-miR-103a-2*
SwitchGear 3'UTR luciferase reporter plasmidPGAP2 3' UTR sequence
Inhib. RNA
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OriGene RNAi products in human, mouse, rat for PGAP2
Predesigned siRNA for gene silencing in human, mouse, rat PGAP2

Gene Editing
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DNA2.0 Custom Protein Engineering Service for PGAP2

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OriGene clones in human, mouse for PGAP2 (see all 18)
OriGene ORF clones in mouse, rat for PGAP2
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GenScript: all cDNA clones in your preferred vector (see all 2): PGAP2 (NM_014489)
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DNA2.0 Custom Codon Optimized Gene Synthesis Service for PGAP2
Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PGAP2

Cell Line
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In Situ Assay
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Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PGAP2


(According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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Subcellular locations from UniProtKB/Swiss-Prot
PGAP2_HUMAN, Q9UHJ9: Golgi apparatus membrane; Multi-pass membrane protein (By similarity). Endoplasmic reticulum
membrane; Multi-pass membrane protein (By similarity)
Subcellular locations from COMPARTMENTS: 

CompartmentConfidence
endoplasmic reticulum5
golgi apparatus5
plasma membrane3
nucleus2

Gene Ontology (GO): 4 cellular component terms:    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0000139Golgi membrane ISS--
GO:0005634nucleus IEA--
GO:0005789endoplasmic reticulum membrane ISS--
GO:0016021integral component of membrane IEA--

Find genes that share ontologies with PGAP2           About GenesLikeMe


(SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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    Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for PGAP2
Interactions:

    Search GeneGlobe Interaction Network for PGAP2

STRING Interaction Network Preview (showing 5 interactants - click image to see 17)

Selected Interacting proteins for PGAP2 (Q9UHJ93 ENSP000002782434) via UniProtKB, MINT, STRING, and/or I2D (see all 18)
InteractantInteraction Details
GeneCardExternal ID(s)
RBPMSQ930623I2D: score=1 
MOGSENSP000002336164STRING: ENSP00000233616
PKN1ENSP000003433254STRING: ENSP00000343325
PKN2ENSP000003595524STRING: ENSP00000359552
PKN3ENSP000002919064STRING: ENSP00000291906
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Gene Ontology (GO): Selected biological process terms (see all 8):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0006506GPI anchor biosynthetic process ISS--
GO:0006974cellular response to DNA damage stimulus ----
GO:0008630intrinsic apoptotic signaling pathway in response to DNA damage ----
GO:0015031protein transport ----
GO:0042770signal transduction in response to DNA damage IEA--

Find genes that share ontologies with PGAP2           About GenesLikeMe



(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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Browse Small Molecules at EMD Millipore
   Browse drugs & compounds from Enzo Life Sciences
  Browse compounds at ApexBio 

Browse Tocris compounds for PGAP2



(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, and/or Addgene, Primers from OriGene, and/or QIAGEN, Flow cytometry from eBioscience )
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REFSEQ mRNAs for PGAP2 gene (11 alternative transcripts): 
NM_001145438.2  NM_001256235.1  NM_001256236.1  NM_001256237.1  NM_001256238.1  NM_001256239.1  NM_001256240.1  NM_001283038.1  
NM_001283039.1  NM_001283040.1  NM_014489.3  

Unigene Cluster for PGAP2:

Post-GPI attachment to proteins 2
Hs.133968  [show with all ESTs]
Unigene Representative Sequence: AL049261
Selected Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 38):
ENST00000528216(uc001lyl.3 uc010qya.2 uc021qcm.1) ENST00000396986
ENST00000300730(uc010qxy.2 uc001lyn.4) ENST00000532535 ENST00000492246
ENST00000465237 ENST00000477358 ENST00000532523(uc010qyb.2) ENST00000459679
ENST00000464229 ENST00000464261 ENST00000490830 ENST00000464906 ENST00000524661
ENST00000485602 ENST00000475884 ENST00000489571 ENST00000464441
miRNA
Products:
     
Block miRNA regulation of human, mouse, rat PGAP2 using miScript Target Protectors
Selected qRT-PCR Assays for microRNAs that regulate PGAP2 (see all 18):
hsa-miR-29a hsa-miR-29c hsa-miR-578 hsa-miR-1285 hsa-miR-449a hsa-miR-4314 hsa-miR-3613-3p hsa-miR-103a-2*
SwitchGear 3'UTR luciferase reporter plasmidPGAP2 3' UTR sequence
Inhib. RNA
Products:
     
OriGene RNAi products in human, mouse, rat for PGAP2
Predesigned siRNA for gene silencing in human, mouse, rat PGAP2
Clone
Products:
     
OriGene clones in human, mouse for PGAP2 (see all 18)
OriGene ORF clones in mouse, rat for PGAP2
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
GenScript: all cDNA clones in your preferred vector (see all 2): PGAP2 (NM_014489)
DNA2.0 Custom Codon Optimized Gene Synthesis Service for PGAP2
Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PGAP2
Primer
Products:
    
OriGene qSTAR qPCR primer pairs in human, mouse for PGAP2
Search Pre-validated RT2 qPCR Primer Assays in human, mouse, rat PGAP2
  QuantiTect SYBR Green Assays in human, mouse, rat PGAP2
  QuantiFast Probe-based Assays in human, mouse, rat PGAP2

Additional mRNA sequence: 

AF159615.1 AK292181.1 AK295202.1 AK301991.1 AK307359.1 AK308525.1 AL049261.1 AL096753.1 
AY373030.1 BC009930.2 NR_027016.2 NR_027017.2 NR_027018.2 NR_045923.1 NR_045925.1 NR_045926.1 
NR_045927.1 NR_045929.1 

24 DOTS entries:

DT.40195817  DT.100792432  DT.100792435  DT.100792434  DT.210956  DT.91774883  DT.95216334  DT.100792424 
DT.100838638  DT.91774878  DT.120743834  DT.120744078  DT.95216338  DT.100792427  DT.100792436  DT.95216335 
DT.100697959  DT.100810074  DT.102835283  DT.120744033  DT.92017388  DT.95216332  DT.95360068  DT.120744669 

Selected AceView cDNA sequences (see all 181):

AL536013 AI630277 AA887726 BG680994 AL558782 CR626434 CD675113 CB139696 
CR618702 BM455898 CR605507 BI766112 CK819763 CR622521 CD675009 BI768071 
CR604431 BU633622 CR619655 CR607759 BX439615 CR608371 CR590396 CR613312 

GeneLoc Exon Structure

Selected Alternative Splicing Database (ASD) splice patterns (SP) for PGAP2 (see all 24)    About this scheme

ExUns: 1 ^ 2a · 2b · 2c · 2d · 2e ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7a · 7b ^ 8a · 8b · 8c ^ 9a · 9b · 9c · 9d · 9e · 9f · 9g ^ 10 ^ 11a · 11b ·
SP1:                                                  -           -     -     -           -     -                             -     -     -     -               
SP2:                                                  -     -     -     -     -           -     -                             -     -     -     -               
SP3:                                      -     -     -     -     -     -     -           -     -                       -     -     -     -     -               
SP4:                                                  -     -     -     -     -           -     -                       -     -     -     -                     
SP5:                                      -     -     -     -     -     -                 -     -                       -     -     -     -     -               

ExUns: 11c ^ 12a · 12b · 12c · 12d · 12e · 12f · 12g · 12h
SP1:                                                      
SP2:                                                      
SP3:                                                      
SP4:                                                      
SP5:                                                      


ECgene alternative splicing isoforms for PGAP2

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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PGAP2 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS <intensity>2/3
CGAP TAG: TATTTTCTTC
PGAP2 Expression
About this image


PGAP2 expression in embryonic tissues and stem cells    About this table
Data from LifeMap, the Embryonic Development and Stem Cells Database
 selected tissues (see all 2) fully expand
 
 Gut Tube (Gastrointestinal Tract)
         Hindgut
 
 Ovary (Reproductive System)
         Mature Granulosa Cells Antral Follicle
PGAP2 Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

PGAP2 Protein Expression

SOURCE GeneReport for Unigene cluster: Hs.133968

UniProtKB/Swiss-Prot: PGAP2_HUMAN, Q9UHJ9
Tissue specificity: Ubiquitously expressed, with highest levels in testis and pancreas

    Custom PCR Arrays for PGAP2
Primer
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QuantiFast Probe-based Assays in human, mouse, rat PGAP2
In Situ
Assay Products:
 

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PGAP2

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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This gene was present in the common ancestor of animals.

Orthologs for PGAP2 gene from Selected species (see all 12)    About this table
Organism Taxonomic
classification
Gene Description Human
Similarity
Orthology
Type
Details
mouse
(Mus musculus)
Mammalia Pgap25 post-GPI attachment to proteins 2   --   7 (54.71 cM) 102210208 
chicken
(Gallus gallus)
Aves LOC1008596321 post-GPI attachment to proteins factor 2-like 72.18(n)
70.16(a)
  100859632  XM_004938981.1  XP_004939038.1 
lizard
(Anolis carolinensis)
Reptilia PGAP26
post-GPI attachment to proteins 2
53(a)
1 ↔ 1
GL343900.1(80475-100389)
zebrafish
(Danio rerio)
Actinopterygii pgap21 post-GPI attachment to proteins 2 57.52(n)
46.08(a)
  541417  NM_001013544.2  NP_001013562.1 
fruit fly
(Drosophila melanogaster)
Insecta CG38761 CG3876 56.29(n)
48.25(a)
  33258  NM_134704.5  NP_608548.1 
worm
(Caenorhabditis elegans)
Secernentea tag-1891 tag-189 45.66(n)
39.08(a)
  188041  NM_065565.4  NP_497966.2 


ENSEMBL Gene Tree for PGAP2 (if available)
TreeFam Gene Tree for PGAP2 (if available)

(Paralogs according to 1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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Paralogs for PGAP2 gene

Find genes that share paralogs with PGAP2           About GenesLikeMe


1 Pseudogenes.org Pseudogene for PGAP2
PGOHUM00000244321


(SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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Selected SNPs for PGAP2 (see all 680)    About this table                                 

Genomic DataTranscription Related DataAllele Frequencies
SNP IDValidClinical
significance
Chr 11 posSequence#AA
Chg
TypeMore#Allele
freq
PopTotal
sample
More
----------
VAR_0696644
Hyperphosphatasia with mental retardation syndrome 3 (HPMRS3)4--see VAR_0696642 R W mis40--------
VAR_0696664
Hyperphosphatasia with mental retardation syndrome 3 (HPMRS3)4--see VAR_0696662 L S mis40--------
VAR_0696684
Hyperphosphatasia with mental retardation syndrome 3 (HPMRS3)4--see VAR_0696682 R P mis40--------
VAR_0696674
Hyperphosphatasia with mental retardation syndrome 3 (HPMRS3)4--see VAR_0696672 T I mis40--------
VAR_0696654
Hyperphosphatasia with mental retardation syndrome 3 (HPMRS3)4--see VAR_0696652 Y C mis40--------
rs1879657161,2
--3560976(+) ACAGGA/GTTTCA 2 -- us2k10--------
rs1917132781,2
--3561003(+) TGTCTC/TGATCT 2 -- us2k10--------
rs2021923061,2
C--3561079(+) CCCCCA/GCGAGA 2 -- us2k10--------
rs2004727001,2
--3561080(+) CCCCG-/CGAGAC 2 -- us2k10--------
rs1903293031,2
--3561478(+) GGATAA/GGGGAG 5 -- us2k10--------
rs1816551201,2
--3561531(+) GAGTGC/TGCACC 5 -- us2k10--------
rs1465915331,2
--3561534(+) TGCGCA/CCCTTC 5 -- us2k10--------
rs1876143601,2
--3561536(+) CGCACC/TTTCTC 5 -- us2k10--------
rs1903510651,2
--3561537(+) GCACCC/TTCTCC 5 -- us2k10--------
rs771555101,2
C,F--3561567(+) AGTGCG/ATCTGA 5 -- us2k12Minor allele frequency- A:0.09CSA WA 120
rs1810760531,2
C--3561631(+) CCTAGA/TCTGGG 5 -- us2k10--------
rs734304671,2
C,F--3821034(+) CCTATA/GCAAAA 9 -- int18Minor allele frequency- G:0.21WA NA CSA 249
rs1929171651,2
--3821067(+) TGGCAA/TGCGCC 9 -- int10--------
rs1497453641,2
--3821126(+) CAAGAA/GGTTAA 9 -- int10--------
rs1845813531,2
--3821155(+) TTACAA/GTCATG 9 -- int10--------
rs71021481,2
C,F,H--3821183(+) ACAGAG/CGGAGC 9 -- int115Minor allele frequency- C:0.13NS EA NA WA CSA 792
rs1454820601,2
--3821268(+) TTGTAC/GGTGCT 9 -- int10--------
rs1875778131,2
--3821276(+) GCTCAA/GTAGAT 9 -- int10--------
rs1483928041,2
--3821290(+) TGAAGA/GAAGAA 9 -- int10--------
rs1425633921,2
--3821311(+) ATATGA/GTTGGC 9 -- int10--------
rs744413961,2
C,F--3821552(+) TTTTGG/ATGTCC 9 -- int11Minor allele frequency- A:0.05WA 118
rs1464446371,2
--3821624(+) TTCTTC/TAGTGG 9 -- int10--------
rs1920479161,2
--3821655(+) ACTTTC/GAGTCA 9 -- int10--------
rs1850260981,2
--3821780(+) CTCACA/GCCTGT 9 -- int10--------
rs1894062011,2
--3821940(+) GGGAGA/GCTGAG 9 -- int10--------
rs28989351,2
C,F--3822058(+) AAAAAG/AAAAGA 9 -- int1 trp34Minor allele frequency- A:0.25NA WA CSA 8
rs1406714731,2
C--3822092(+) GAATGC/GTGGCT 9 -- int10--------
rs618969291,2
C,F--3822113(+) ATCCCG/AGCACT 9 -- int11Minor allele frequency- A:0.00NA 2
rs110298241,2
C,F--3822221(+) TAGCCG/AGGTGT 9 -- int13Minor allele frequency- A:0.50NA CSA 6
rs108351131,2
C,F,A--3822271(+) AGGCAG/AGAGAA 9 -- int14Minor allele frequency- A:0.38NA CSA 8
rs1844717931,2
--3822342(+) GTGGGC/GAACAA 9 -- int10--------
rs1889934571,2
--3822350(+) CAAGAA/GTGAAA 9 -- int10--------
rs341226881,2
C--3822365(+) AAAAAA/-GAAAA 9 -- int12Minor allele frequency- -:0.00NA CSA 4
rs1502685551,2
C--3822445(+) TTTGTA/GTAAAA 9 -- int10--------
rs107676051,2
C,F,A,H--3822492(+) GTGAGA/CATTAA 9 -- int111Minor allele frequency- C:0.36NA WA CSA EA 374
rs71226191,2
C,F,H--3822531(+) atagtA/Ccctgg 9 -- int15Minor allele frequency- C:0.01NS EA WA 522
rs107676061,2
C,F,A,H--3822573(+) TGCATG/TATTTA 9 -- int115Minor allele frequency- T:0.35NA WA CSA EA 381
rs1814266631,2
--3822595(+) CAGCCA/GGGCAT 9 -- int10--------
rs125766711,2
C,F,A,H--3822655(+) atcacG/Aaggtc 9 -- int16Minor allele frequency- A:0.33NA WA 12
rs110298281,2
C,F,A,H--3822682(+) cctggT/Ctaaca 9 -- int18Minor allele frequency- C:0.40NA WA CSA 15
rs1853471711,2
--3822703(+) CCGTCC/TGTACT 9 -- int10--------
rs1905999491,2
--3822794(+) GTGAAC/TCCAGG 9 -- int10--------
rs1129195351,2
C,F--3822808(+) CGGAGC/TTTGCA 9 -- int11Minor allele frequency- T:0.50WA 2
rs1864251681,2
--3822826(+) GAGATC/TGCGCC 9 -- int10--------
rs1922751741,2
C--3822827(+) AGATCA/GCGCCA 9 -- int10--------
rs341043101,2
C--3822871(+) ATCTC-/AAAA  
        
AAAAA
9 -- int10--------
rs107676101,2
C,F,A,H--3822897(+) TTTCCA/GGGCAC 9 -- int17Minor allele frequency- G:0.23NA WA CSA 13
rs1836454891,2
C--3822950(+) CGGGCA/CGATCA 9 -- int10--------
rs108351171,2
C,F,A,H--3822996(+) ACGGCA/GAAACC 9 -- int19Minor allele frequency- G:0.39NA WA CSA 18
rs110298301,2
C,F--3823068(+) TAGTCA/GGGAGG 9 -- int15Minor allele frequency- G:0.40NA WA CSA 10
rs1124398061,2
C--3823079(+) CTGAGA/GCAGGA 9 -- int10--------
rs1878976871,2
--3823126(+) GCCAAA/GATTGC 9 -- int10--------
rs24122901,2
C,F,A--3823193(+) ATAAAA/TAAATA 9 -- int16Minor allele frequency- T:0.34WA CSA NA EA 364
rs28989361,2
C,F,A,H--3823244(+) GACATG/TGATTC 9 -- int112Minor allele frequency- T:0.36NA WA CSA EA 376
rs30618971,2
C--3823306(+) TTTTT-/TTTGCTAT 9 -- cds1 int10--------
rs10373821,2
C,F,A,H--3823398(+) AGATGA/TGCAGG 9 -- int113Minor allele frequency- T:0.33NS NA WA CSA EA 494
rs1149679181,2
C,F--3823407(+) GGGAAA/GTAGTG 9 -- int11Minor allele frequency- G:0.02WA 118
rs1906514761,2
--3823420(+) TACTTC/GTGGAA 9 -- int10--------
rs1413610911,2
C--3823441(+) AATACA/GTACTG 9 -- int10--------
rs1827566421,2
--3823446(+) GTACTA/GGATGA 9 -- int10--------
rs1507849311,2
--3823503(+) GATACA/GTTGTT 9 -- int10--------
rs10373831,2
C,F,A,H--3823519(+) CTTTGA/GTAGGC 9 -- int111Minor allele frequency- G:0.36NA WA CSA EA 374
rs10373841,2
C,F,A,H--3823529(+) CAAGTG/AGCCCA 9 -- int112Minor allele frequency- A:0.36MN NA WA CSA EA 560
rs1870851701,2
--3823692(+) GCTTAC/GAAACC 9 -- int10--------
rs1922951321,2
--3823716(+) GCCCTC/GTCCTG 9 -- int10--------
rs801324311,2
C,F--3823830(+) CACTGT/AATGCA 9 -- int11Minor allele frequency- A:0.13WA 118
rs750056401,2
C--3823911(+) TCTTTC/TCAGAG 9 -- int10--------
rs777692461,2
C,F--3823943(+) AGCTAA/GGTTCA 9 -- int11Minor allele frequency- G:0.07WA 118
rs1498687411,2
--3823984(+) CCTAAA/GTTATT 9 -- int10--------
rs1845097761,2
--3824017(+) CTTGTC/GTATGA 9 -- int10--------
rs1880871081,2
--3824021(+) TCTATC/GACATG 9 -- int10--------
rs97374611,2
C,F,A--3824040(+) ACTTTA/GTATTT 9 -- int110Minor allele frequency- G:0.24EA WA NA CSA 715
rs1428584271,2
C--3824057(+) GTTTC-/TTTT  
        
TTTTT
9 -- int10--------
rs74790581,2
C,A--3824099(+) ttgccC/Taggct 9 -- int12Minor allele frequency- T:0.00WA NA 4
rs1932587951,2
--3824113(+) GTGCAA/GTGGCA 9 -- int10--------
rs110298311,2
C--3824150(+) CTCCCA/GGGTTC 9 -- int12Minor allele frequency- G:0.25NA 4
rs74841071,2
C,F,A--3824214(+) accacG/Acccgg 9 -- int11Minor allele frequency- A:0.00NA 2
rs74812021,2
C,F,A--3824217(+) acaccC/Tggcta 9 -- int13Minor allele frequency- T:0.50NA 6
rs74812031,2
C,A--3824236(+) tttttC/Tttttg 9 -- int1 trp30--------
rs1995696921,2
C--3824236(+) TTTTT-/CTTTTG 9 -- int10--------
rs97339941,2
C,F,A--3824397(+) TTTGTA/GTATTT 9 -- int13Minor allele frequency- G:0.33NA 6
rs110298321,2
C,A--3824450(+) ACTCCC/TGACCT 9 -- int14Minor allele frequency- T:0.14NA WA CSA 7
rs1895367631,2
--3824494(+) CTGGGA/GTTACA 9 -- int10--------
rs341041901,2
C--3824526(+) CCCTG-/T/TTT 
        
TTTTT
13 -- int1 cds10--------
rs110298341,2
C,A--3824547(+) AGAGAT/CGGGGT 9 -- int12Minor allele frequency- C:0.25NA 4
rs1513172221,2
--3824603(+) CCACCC/TGCCTC 9 -- int10--------
rs1405965061,2
C--3824668(+) GTTTTC/GTTTTT 9 -- int10--------
rs1841055021,2
--3824721(+) GGTGCA/GGTCTC 9 -- int10--------
rs110298361,2
C,F,A--3824726(+) AGTCTC/TGGCTC 9 -- int14Minor allele frequency- T:0.50NA 8
rs1120094911,2
C,F--3824815(+) ACCACG/ACCAGG 9 -- int11Minor allele frequency- A:0.50CSA 2
rs728443131,2
C--3824932(+) GGATTA/GTGGGC 9 -- int12Minor allele frequency- G:0.32NA 122
rs118277881,2
C,F,H--3825007(+) CGAATC/G/TTACTG 9 -- int14NA WA CSA 124
rs1884965501,2
C--3825010(+) ATTTAA/CTGCTA 9 -- int10--------
rs110298381,2
A--3825027(+) TATATA/TTTTTT 9 -- int10--------
rs345223011,2
C--3825027(+) ATATA-/T/TT  
        
TTTTT
9 -- int10--------
rs340139451,2
C--3825028(+) TATAT-/A/ATT 
        
TTTTT
13 -- int1 cds11CSA 2
rs748535221,2
C--3825029(+) TATATT/ATTTTT 9 -- int11Minor allele frequency- A:0.50WA 2
rs39864421,2
C--3825038(+) TTTTT-/T/TT  
        
GAGAC
9 -- int11NA 2
rs122721141,2
--3825082(+) gtggtA/Gcgatc 9 -- int10--------
rs618969301,2
C--3825165(+) TCAGGC/TGCGTG 9 -- int10--------
rs1817095181,2
--3825166(+) CAGGCA/GCGTGC 9 -- int10--------
rs1128938571,2
C,F--3825178(+) ACCACG/ACCTGG 9 -- int11Minor allele frequency- A:0.50CSA 2
rs15308921,2
C,F,A,H--3825235(+) AGACTG/CGACTC 9 -- int114Minor allele frequency- C:0.28NA WA CSA EA 381
rs1858769761,2
--3825262(+) GCGATC/GCGCCT 9 -- int10--------
rs15308931,2
C,F,A,H--3825278(+) AGCCTC/ACCAAA 9 -- int17Minor allele frequency- A:0.18NA WA CSA 17
rs1119449981,2
F--3825316(+) ATGCCC/TAGCCC 9 -- int12Minor allele frequency- T:0.08CSA WA 120
rs1138878321,2
C--3825317(+) TGCCCA/GGCCCA 9 -- int12Minor allele frequency- G:0.08CSA WA 120
rs1124554311,2
C,F--3825396(+) TAGAAA/GTTACC 9 -- int12Minor allele frequency- G:0.04CSA WA 120
rs1146084391,2
F--3825407(+) ACATGC/GATTCT 9 -- int11Minor allele frequency- G:0.02WA 118
rs110298391,2
C--3825415(+) TCTTAA/CCTTAC 9 -- int10--------
rs590061421,2
C,F--3825436(+) TGCTCA/GTAAAT 9 -- int14Minor allele frequency- G:0.24WA CSA 124
rs1480689801,2
--3825456(+) GAAGGA/GTAGAG 9 -- int10--------
rs763200661,2
C,F--3825488(+) AGAGAG/AAACAT 9 -- int12Minor allele frequency- A:0.06CSA WA 120
rs1898250521,2
--3825508(+) GATGAA/TCAGGG 9 -- int10--------
rs1417742461,2
--3825511(+) GAACAG/TGGAAG 9 -- int10--------
rs1128983371,2
C,F--3825584(+) GAGTGA/CGCTGG 9 -- int12Minor allele frequency- C:0.09CSA WA 120
rs1459534641,2
--3825648(+) TTTGAC/GAAGAA 9 -- int10--------
rs1824458231,2
--3825800(+) GTGTCA/CCCTTT 9 -- int10--------
rs1870852591,2
C--3825842(+) TAAATA/GCTGCC 9 -- int10--------
rs1911441311,2
--3825844(+) AATACC/TGCCCA 9 -- int10--------
rs1398080931,2
--3825886(+) CAACAA/CATATT 9 -- int10--------
rs1822403241,2
--3825913(+) ATTTTA/GTATTT 9 -- int10--------
rs1999994341,2
C--3825942(+) ATTTA-/TTTTTT 9 -- int10--------
rs1858605061,2
--3825993(+) GTGGCA/GCAATG 9 -- int10--------
rs1136035381,2
C,F--3825997(+) CGCAAC/TGTTGG 9 -- int11Minor allele frequency- T:0.50CSA 2
rs49108291,2
C,F,A,H--3826035(+) CAAGCG/AATTCT 9 -- int17Minor allele frequency- A:0.13NA WA CSA 15
rs1398982611,2
--3826134(+) GTCACA/GTTGGC 9 -- int10--------
rs618969311,2
C,F--3826172(+) GGTGAT/CCTGCT 9 -- int12Minor allele frequency- C:0.11NA 122
rs1118899611,2
C,F--3826181(+) CTCACC/ATCAGC 9 -- int11Minor allele frequency- A:0.50CSA 2
rs1902452831,2
--3826211(+) ACAGGC/TGTGAG 9 -- int10--------
rs1458026701,2
--3826212(+) CAGGCA/GTGAGC 9 -- int10--------
rs356306431,2
C--3826217(+) GTGAGG/CCACCG 9 -- int11Minor allele frequency- C:0.50NA 2
rs1117661771,2
C,F--3826218(+) TGAGCG/CACCGC 9 -- int11Minor allele frequency- C:0.50CSA 2
rs1456531771,2
--3826266(+) CCTCAC/TATAAA 9 -- int10--------
rs1125523301,2
C--3826300(+) ACTGAT/CAGTGA 9 -- int12Minor allele frequency- C:0.07CSA WA 120
rs1133409371,2
C--3826316(+) AGAGAT/-TTCAG 9 -- int11Minor allele frequency- -:0.50CSA 2
rs1825141411,2
--3826318(+) AGATTG/TCAGAA 9 -- int10--------
rs1887032791,2
--3826384(+) ACTGTA/GGCTGA 9 -- int10--------
rs2014296081,2
C--3826489(+) ATATTC/TTNNNN 9 -- int10--------
rs1928440301,2
--3826545(+) GTTGTA/GGAGTG 9 -- int10--------
rs734210631,2
C,F--3826688(+) GCTGTT/CGCCAT 9 -- int13Minor allele frequency- C:0.07WA CSA 122
rs1841581041,2
--3826691(+) GTTGCC/TATGTT 9 -- int10--------
rs1887018661,2
--3826878(+) AGGATC/TGCTTG 9 -- int10--------
rs1476706911,2
--3826893(+) TAGGAA/GTTCAA 9 -- int10--------
rs116025631,2
C,F,H--3826942(+) agacaT/Cggtct 9 -- int17Minor allele frequency- C:0.45NA WA EA 366
rs1914320991,2
--3826979(+) TGGCGC/TGATCT 9 -- int10--------
rs1836114731,2
--3827026(+) ATTCTC/TCTGCC 9 -- int10--------
rs710413971,2
C--3827208(-) CGGGG-/GCGTGG 9 -- int12Minor allele frequency- G:0.00NA CSA 4
rs1423184391,2
--3827267(+) AACAGA/GGGCTC 11 -- int1 us2k10--------
rs107676121,2
C,F,A,H--3827301(+) TATTTT/CCCAAA 11 -- int1 us2k121Minor allele frequency- C:0.47NS EA NA WA 2350
rs1838547501,2
--3827309(+) AAATCA/GCCAGA 11 -- int1 us2k10--------
rs779394241,2
C,F--3827562(+) TCTTTT/CTGTAA 11 -- int1 us2k12Minor allele frequency- C:0.09CSA WA 120
rs799116851,2
C,F--3827591(+) GTCCTG/AGGACC 11 -- int1 us2k11Minor allele frequency- A:0.08WA 118
rs1137708771,2
F--3827800(+) AAAAAG/CAGCTC 16 -- int1 us2k12Minor allele frequency- C:0.04CSA WA 120
rs618969531,2
C,F--3827866(+) GAATTA/CTCTCA 16 -- int1 us2k13Minor allele frequency- C:0.12NA 124
rs1853371831,2
--3827928(+) AACTTA/GGTTTC 16 -- int1 us2k10--------
rs1179793451,2
C,F--3827960(+) AGGATA/GTTAAA 16 -- int1 us2k11Minor allele frequency- G:0.02NA 120
rs618969541,2
C,F--3827973(+) GTATCT/CACTGG 16 -- int1 us2k13Minor allele frequency- C:0.11NA 124
rs71172911,2
C,F,A,H--3827982(+) GgcggG/Aggctc 16 -- int1 us2k112Minor allele frequency- A:0.25NA WA CSA EA 374
rs1512645141,2
C--3828072(+) TATGGC/TGAAAC 16 -- int1 us2k10--------
rs1121390971,2
C--3828252(+) TCTCC-/AAAAAA 16 -- int1 us2k11Minor allele frequency- A:0.50CSA 2
rs1134825051,2
F--3828287(+) AAGGCG/CAGGCG 16 -- int1 us2k11Minor allele frequency- C:0.50CSA 2
rs1503567301,2
C--3828325(+) CTTTGA/GGAAGC 16 -- int1 us2k10--------
rs1380325741,2
C--3828332(+) AAGCCA/GAGGCG 16 -- int1 us2k10--------
rs1115410651,2
C--3828337(+) AAGGCG/-GGGGC 16 -- int1 us2k11Minor allele frequency- -:0.50CSA 2
rs1896926051,2
--3828409(+) AAAAAC/GTACAA 16 -- int1 us2k10--------
rs1827388301,2
--3828427(+) CTGGGC/GGCAGT 16 -- int1 us2k10--------
rs1118090901,2
F--3828460(+) CTACTC/TGGGAG 16 -- int1 us2k11Minor allele frequency- T:0.50CSA 2
rs2005781381,2
C--3828540(+) ACAGG-/TTTTTT 16 -- int1 us2k10--------
rs1862556861,2
--3828601(+) GGTACA/GATCTC 16 -- int1 us2k10--------
rs1920120771,2
--3828897(+) GGATAC/TACTGG 16 -- int1 us2k10--------
rs1385291881,2
--3828908(+) GTGTTC/GAGAAT 16 -- int1 us2k10--------
rs728443401,2
C--3828997(+) ATGCTC/TTGACT 16 -- int1 us2k12Minor allele frequency- T:0.11NA 122
rs754532451,2
C,F--3829223(+) GCGCTC/ACGTAG 16 -- int1 us2k11Minor allele frequency- A:0.50NA 2
rs728443411,2
C--3829224(+) CGCTAC/TGTAGG 16 -- int1 us2k11Minor allele frequency- T:0.50NA 2
rs751080731,2
C--3829297(+) CTCAC-/CGGGTCTC 16 -- int1 cds1 us2k1 nc-transcript-variant0--------
rs1925032121,2
--3829308(+) TCACTC/GCCTGC 16 -- int1 ut51 us2k1 nc-transcript-variant0--------
rs22788451,2
C,F,A,H--3829419(+) GAAGGC/GCGAGG 16 -- int1 us2k119Minor allele frequency- G:0.30EA NS NA WA 2702
rs1830939391,2
C--3829529(+) GTAGAC/TGGAAC 19 R W mis1 ut51 us2k10--------
rs1867021371,2
--3829783(+) CCCGCC/TCCCGC 16 -- int1 ut51 nc-transcript-variant0--------
rs1911646121,2
C--3829808(+) CCAGCC/GCGCAG 16 -- int1 ut51 nc-transcript-variant0--------
rs618969561,2
C,F--3829862(+) CGGCAC/GTCTCG 16 -- int1 ut51 nc-transcript-variant1Minor allele frequency- G:0.08NA 120
rs618969571,2
C,F--3830078(+) CCAGCG/ATGGGG 16 -- int12Minor allele frequency- A:0.05WA NA 238
rs1850009341,2
--3830301(+) CACCTA/TCCTCA 16 -- int10--------
rs1180145381,2
C,F--3830358(+) GCAGGG/AGGCCT 16 -- int11Minor allele frequency- A:0.02NA 120
rs28989371,2
C,F,A--3830497(+) ACTATC/GTGCAG 16 -- int16Minor allele frequency- G:0.22NA WA CSA 216
rs1879239181,2
--3830541(+) TGTGGA/GGTAGA 16 -- int10--------
rs1461782171,2
--3830630(+) AGTGCC/TTAAGT 16 -- int10--------
rs749828901,2
F--3830655(+) CACACA/GGCTAA 16 -- int11Minor allele frequency- G:0.01EA 120
rs1931951251,2
--3830714(+) ACCTCC/TTCATC 16 -- int10--------
rs618969581,2
C,F--3830770(+) CTTCAA/GTTTGG 16 -- int13Minor allele frequency- G:0.11NA 124
rs1484370241,2
--3830785(+) CCTAGG/TGGTTC 16 -- int10--------
rs1851603041,2
--3830970(+) GGGTCA/GCCAGA 16 -- int10--------
rs1416815011,2
--3831115(+) TTGTTC/GTGGAA 16 -- int10--------
rs1508895021,2
--3831170(+) TGGGAC/TTAAAG 16 -- int10--------
rs1169318481,2
F--3831243(+) AGAAGG/CGTATA 16 -- int11Minor allele frequency- C:0.03NA 120
rs1393385781,2
--3831296(+) GCCAAC/TGTTCC 16 -- int10--------
rs1456675181,2
--3831297(+) CCAACA/GTTCCA 16 -- int10--------
rs37816151,2
C,F,A,H--3831304(+) TCCAGA/GGATGG 16 -- int126Minor allele frequency- N:0.00EA NA NS WA 4046
rs791838421,2
C,F--3831322(+) TTCAGC/TTCAGC 16 -- int12Minor allele frequency- T:0.07CSA WA 120
rs1478917781,2
C--3831492(+) TCCTA-/ACACCTG 16 -- int10--------
rs1164065011,2
C,F--3831567(+) TCTTCG/ATGGGT 16 -- int11Minor allele frequency- A:0.03WA 118
rs1888955321,2
--3831711(+) TATCTA/GAGGGG 16 -- int10--------
rs1477386681,2
--3831853(+) GGCCTC/GATTCT 16 -- int10--------
rs1407269151,2
--3831931(+) TCAGCG/TTCCAT 16 -- int10--------
rs1177347211,2
C,F--3832019(+) CCAGTG/TGGGAA 16 -- int11Minor allele frequency- T:0.02NA 120
rs28989381,2
C,F,O,A,H--3832257(+) ATTTGT/GTTCAT 16 -- int138Minor allele frequency- G:0.44NA NS EA WA CSA 3702
rs2010821451,2
C--3832446(+) GCTGCC/TTGGGG 16 -- int10--------
rs1819583681,2
C--3832517(+) TGGATC/TGGGAT 23 R W mis1 ut51 int10--------
rs2001643871,2
C--3832541(+) GGCTCC/TGCTTC 24 R C S mis1 syn1 int10--------
rs1847804821,2
--3832705(+) TCTTCC/TTTAGA 16 -- int10--------
rs1173062351,2
F--3832710(+) TTTAGA/TTCTTG 16 -- int11Minor allele frequency- T:0.01NA 120
rs1446503391,2
C--3832780(+) CTGGGA/GGGATG 16 -- int10--------
rs1883868541,2
--3832816(+) AGTCTC/TCCTCT 16 -- int10--------
rs1456973021,2
--3832914(+) TGTCCC/TACCCC 16 -- int10--------
rs1489668211,2
C--3833310(+) TTCCAC/TAGATG 16 -- int10--------
rs110298601,2
H--3833323(+) TGTGTA/TCCCTC 16 -- int14Minor allele frequency- T:0.00NS EA 420
rs1807994321,2
--3833471(+) ACAGAC/GACCCA 16 -- int10--------
rs1867173301,2
--3833700(+) TCCTTC/TCCAGG 16 -- int10--------
rs1911598991,2
--3833767(+) GAAATA/GTGAGG 16 -- int10--------
rs1811015021,2
--3833768(+) AAATGC/TGAGGA 16 -- int10--------
rs1437037491,2
--3833850(+) TAGGTA/GGAGAA 16 -- int10--------
rs1509859461,2
--3833857(+) AGAAGA/CGGCAG 16 -- int10--------
rs1409593031,2
C--3834029(+) ACTGGA/TGTTTC 16 -- int10--------
rs618969591,2
C,F--3834079(+) AGGTAT/CGGACA 16 -- int13Minor allele frequency- C:0.11NA 124
rs1867935201,2
--3834236(+) TGTTAC/TGCTAG 16 -- int10--------
rs1169448231,2
C,F--3834259(+) ATCCCG/ACAAAA 16 -- int11Minor allele frequency- A:0.02EA 120
rs171738821,2
C,F,H--3834314(+) GCTAAT/CGTAAT 16 -- int113Minor allele frequency- C:0.08NA NS EA CSA WA 808
rs1903580851,2
--3834374(+) TATTTA/GTGTCT 16 -- int10--------
rs1833556821,2
--3834452(+) TTTTTA/TATTTG 16 -- int10--------
rs1876839001,2
--3834583(+) TTAGGA/TCTACA 16 -- int10--------
rs580785061,2
C,F--3834607(+) ACACCC/TAGCTT 16 -- int12Minor allele frequency- T:0.15WA 120
rs1508832291,2
C--3834617(+) TAATT-/AAAAAA 16 -- int10--------
rs1898551461,2
--3834699(+) GCCTCA/CACCAC 16 -- int10--------
rs1825377811,2
--3834986(+) TATAAC/GTCAAT 16 -- int10--------
rs71280801,2
C,F,A,H--3835115(+) GGTTAT/CTGCAT 16 -- int12Minor allele frequency- C:0.01NS CSA 122
rs1387772581,2
C--3835170(+) TTAAGA/GTATAG 16 -- int10--------
rs1884552501,2
--3835212(+) CAGTAC/TTAGGT 16 -- int10--------
rs1927194151,2
--3835305(+) TTTCCC/TACTCA 16 -- int10--------
rs172764051,2
C,F,H--3835336(+) GCCCTA/GGGAAT 16 -- int19Minor allele frequency- G:0.06NA NS EA 624
rs1140915771,2
--3835429(+) CCTCCC/TCAGGT 16 -- int10--------
rs1418291831,2
C--3835436(+) AGGTAA/GCCTGT 16 -- int10--------
rs1847302531,2
--3835530(+) CGCCTA/GGGCTG 16 -- int10--------
rs28989431,2
C,A,H--3835647(+) acaccC/Tggcta 16 -- int17Minor allele frequency- T:0.00NA CSA 13
rs73421911,2
C,F--3835648(+) cacctG/Agctaa 16 -- int11Minor allele frequency- A:0.50CSA 2
rs1875793701,2
--3835702(+) GGCTCA/GTCTCG 16 -- int10--------
rs1920524621,2
--3835707(+) GTCTCC/GAACTC 16 -- int10--------
rs1850399151,2
--3835747(+) CTCCCA/GAAGTG 16 -- int10--------
rs1494867891,2
C--3835767(+) AAGGCA/GTGAGC 16 -- int10--------
rs1439174711,2
C--3835775(+) AGCCAC/TCATGC 16 -- int10--------
rs1894232991,2
--3835904(+) TTCCAC/GAGTGC 16 -- int10--------
rs569378151,2
--3835981(+) TCTTTC/TCTTTC 16 -- int10--------
rs2011334031,2
--3836041(+) TTCTT-/TCTCTTT 16 -- int10--------
rs128051391,2
C--3836044(+) tttctT/Ctttct 16 -- int11Minor allele frequency- C:0.00NA 2
rs107676181,2
C,A,H--3836046(+) TCTCTC/TTCTTT 16 -- int11Minor allele frequency- T:0.00NA 2
rs2007117641,2
--3836053(+) CTTTC-/TTTTTT 16 -- int10--------
rs1115752661,2
C,F--3836064(+) TCTTTC/TTTTCC 16 -- int11Minor allele frequency- T:0.50CSA 2
rs110298691,2
--3836081(+) CTTTCC/TTTCTT 16 -- int10--------
rs1410478511,2
--3836141(+) CCCTTG/TCCCTT 16 -- int10--------
rs1843515481,2
--3836189(+) TTGAGG/TCAGGG 16 -- int10--------
rs107676191,2
C,A,H--3836202(+) TTGCTG/CTGTTG 16 -- int13Minor allele frequency- C:0.00NA 6
rs1892939971,2
C--3836225(+) TGCAGC/TGGCAC 16 -- int10--------
rs1508351411,2
C--3836247(+) ACTGCA/GACCTC 16 -- int10--------
rs1813323441,2
--3836304(+) CTGAGA/CTTACA 16 -- int10--------
rs1863950081,2
--3836365(+) GGTTTC/TACTAT 16 -- int10--------
rs1392314071,2
--3836406(+) GAGTAC/TGTACT 16 -- int10--------
rs1906061621,2
--3836419(+) CTTTCC/TGGTGA 16 -- int10--------
rs1500103831,2
C--3836474(+) CTCCTC/TGTGGC 16 -- int10--------
rs1152262891,2
C--3836475(+) TCCTCG/ATGGCT 16 -- int11Minor allele frequency- A:0.01WA 118
rs1431139571,2
C--3836509(+) GAAGA-/CAGTAA 16 -- int10--------
rs2017537491,2
--3836533(+) GTCTG-/TCTTCTTC 16 -- int10--------
rs2009533171,2
--3836539(+) CTTCT-/TCTTTTT 16 -- int10--------
rs1138869081,2
C,F--3836569(+) AATCTC/TGCTTT 16 -- int13Minor allele frequency- T:0.10NA CSA 124
rs1814902981,2
--3836578(+) TTGTCA/CCCCAG 16 -- int10--------
rs107421701,2
C,H--3836663(+) cctccT/Cgagta 16 -- int14Minor allele frequency- C:0.12NA 8
rs1864298821,2
--3836689(+) ACACCA/GCCACC 16 -- int10--------
rs1412902551,2
C--3836693(+) CGCCAC/TCATGA 16 -- int10--------
rs1908796651,2
--3836720(+) ATTTTA/CGTAGT 16 -- int10--------
rs577975811,2
C,F--3836777(+) TCAGGC/AAATCC 16 -- int12Minor allele frequency- A:0.06WA 120
rs1838696311,2
C--3836854(+) AACTTG/TGCCCA 16 -- int10--------
rs618993611,2
C,F--3836870(+) TCACTG/ATTCTC 16 -- int14Minor allele frequency- A:0.13NA CSA 126
rs1434091491,2
C--3836920(+) GGGCAA/GTACAG 16 -- int10--------
rs1876349631,2
--3836992(+) CTGCTA/GTTAGC 16 -- int10--------
rs1168042501,2
F--3837024(+) TGAACA/GTCGAT 16 -- int11Minor allele frequency- G:0.01WA 118
rs1467253531,2
--3837064(+) TTTGTA/GTCCTG 16 -- int10--------
rs172764531,2
C,F,H--3837102(+) TCTCCA/GGTGAG 16 -- int116Minor allele frequency- G:0.04NA NS EA CSA 1106
rs1404486951,2
--3837145(+) AAAAAC/TGGCCA 16 -- int10--------
rs171914481,2
C,F,H--3837205(+) CCTGGA/GTACAA 16 -- int116Minor allele frequency- G:0.06NA NS EA CSA 1516
rs1909094941,2
--3837209(+) GATACA/TACTCT 16 -- int10--------
rs734210671,2
C,F--3837228(+) TCCCTG/ACCCCC 16 -- int12Minor allele frequency- A:0.15WA 120
rs1831025711,2
--3837356(+) GCAGGC/TGTGGA 16 -- int10--------
rs777775971,2
C,F--3837365(+) GAGAAT/CTGGGT 16 -- int11Minor allele frequency- C:0.08EA 120
rs1479828041,2
--3837766(+) CAGGAC/GAGCAG 16 -- int10--------
rs1150823031,2
F--3837784(+) CTCAGT/GGGAGA 16 -- int11Minor allele frequency- G:0.01WA 118
rs1870958191,2
--3837837(+) TGACAC/TTGCAT 16 -- int10--------
rs618993621,2
C,F--3837838(+) GACATT/CGCATC 16 -- int13Minor allele frequency- C:0.12NA 124
rs734210701,2
C,F--3837924(+) TGAGGC/TTTGGA 16 -- int12Minor allele frequency- T:0.26WA 120
rs1406798351,2
C--3837939(+) TCAGAA/GCCTGG 16 -- int10--------
rs71213761,2
C,F,H--3838306(+) CCACCG/AGGAGC 16 -- int15Minor allele frequency- A:0.01NS EA WA 538
rs1923111871,2
--3838326(+) GTAGGC/TTCTTC 16 -- int10--------
rs1501190471,2
C--3838328(+) AGGCTC/TTTCAA 16 -- int10--------
rs1830194301,2
--3838358(+) ACTGTG/TCCAGG 16 -- int10--------
rs71214081,2
C,F,A,H--3838362(+) TGCCAG/AGGGGA 16 -- int112Minor allele frequency- A:0.16NS EA NA WA CSA 1219
rs65784141,2
C,F,A,H--3838489(+) TTTTCC/TTTATA 16 -- int120Minor allele frequency- T:0.25NA NS EA WA CSA 1910
rs3736854931,2
C--3838597(+) TGCAGA/GATGTT 18 R int1 syn10--------
rs341178861,2
C,F--3838599(+) CAGGAT/CGTTCT 18 /T /M int1 mis12Minor allele frequency- C:0.00NA 4584
rs141195165