Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

PFKFB1 Gene

protein-coding   GIFtS: 66
GCID: GC0XM054976

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1


(Previous symbol: PFRX)
 Explore 4 diseases affiliated with
PFKFB1 via our new
 Human Malady Compendium 
Biological research products
for PFKFB1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
6-Phosphofructo-2-Kinase/Fructose-2,6-Biphosphatase 11 2     PFK/FBPase 12 3
PFRX1 2 3 5     6-Phosphofructo-2-Kinase/Fructose-2,6-Bisphosphatase 12
6PF-2-K/Fru-2,6-P2ase Liver Isozyme2 3     HL2K2
6PF-2-K/Fru-2,6-P2ase 12 3     Fructose-6-Phosphate,2-Kinase:Fructose-2,6-Bisphosphatase1
F6PK2 3     

External Ids:    HGNC: 88721   Entrez Gene: 52072   Ensembl: ENSG000001585717   OMIM: 3117905   UniProtKB: P161183   

Export aliases for PFKFB1 gene to outside databases

Previous GC identifers: GC0XM051811 GC0XM052897 GC0XM053564 GC0XM053926 GC0XM054842 GC0XM052011


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for PFKFB1:
This gene encodes a member of the family of bifunctional 6-phosphofructo-2-kinase:fructose-2,6-biphosphatase enzymes.
The enzyme forms a homodimer that catalyzes both the synthesis and degradation of fructose-2,6-biphosphate using
independent catalytic domains. Fructose-2,6-biphosphate is an activator of the glycolysis pathway and an inhibitor of
the gluconeogenesis pathway. Consequently, regulating fructose-2,6-biphosphate levels through the activity of this
enzyme is thought to regulate glucose homeostasis. Multiple alternatively spliced transcript variants have been found
for this gene. (provided by RefSeq, Nov 2012)

UniProtKB/Swiss-Prot: F261_HUMAN, P16118
Function: Synthesis and degradation of fructose 2,6-bisphosphate

Gene Wiki entry for PFKFB1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000023.10  NC_018934.1  NT_011630.14  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the PFKFB1 gene promoter:
         E2F-4   E2F-3a   E2F-5   RP58   E2F-1   E2F   Chx10   E2F-2   POU3F2   ATF   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidPFKFB1 promoter sequence
   Search SABiosciences Chromatin IP Primers for PFKFB1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PFKFB1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: Xp11.21   Ensembl cytogenetic band:  Xp11.21   HGNC cytogenetic band: Xp11.21

PFKFB1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
PFKFB1 gene location

GeneLoc information about chromosome X         GeneLoc Exon Structure

GeneLoc location for GC0XM054976:  view genomic region     (about GC identifiers)

Start:
54,959,394 bp from pter      End:
55,024,967 bp from pter
Size:
65,574 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: F261_HUMAN, P16118 (See protein sequence)
Recommended Name: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1  
Size: 471 amino acids; 54681 Da
Subunit: Homodimer
1 PDB 3D structure from and Proteopedia for PFKFB1:
1K6M (3D)    
Secondary accessions: B2RA88 Q5JXS5 Q99951

Explore the universe of human proteins at neXtProt for PFKFB1: NX_P16118

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P16118

  • PFKFB1 Protein expression data from MOPED and PaxDb:    About this image 
    PFKFB1 Protein Expression
    REFSEQ proteins (3 alternative transcripts): 
    NP_001258733.1  NP_001258734.1  NP_002616.2  

    ENSEMBL proteins: 
     ENSP00000364145   ENSP00000444074   ENSP00000364131  
    Reactome Protein details: P16118
    Human Recombinant Protein Products for PFKFB1: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Protein: PFKFB1
    OriGene Protein Over-expression Lysate: PFKFB1
    OriGene Custom Protein Services for PFKFB1 
    GenScript Custom Purified and Recombinant Proteins Services for PFKFB1
    Novus Biologicals PFKFB1 Proteins
    Novus Biologicals PFKFB1 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for PFKFB1

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005829cytosol TAS--
    GO:00435406-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 complex IDA12379646

    PFKFB1 for ontologies           About GeneDecksing



    PFKFB1 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for PFKFB1 
    GenScript Custom Superior Antibodies Services for PFKFB1
    Novus Biologicals PFKFB1 Antibodies
    Abcam antibodies for PFKFB1 
    Uscn Antibodies for PFKFB1
    ThermoFisher Antibodies for PFKFB1

    Assay Products for PFKFB1: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for PFKFB1
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for PFKFB1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    PFKFB1 for domains           About GeneDecksing

    5 InterPro domains/families:
     IPR016260 Bifunct_6PFK/fruc_bisP_Ptase
     IPR001345 PG/BPGM_mutase_AS
     IPR003094 6Pfruct_kin
     IPR013079 6Phosfructo_kin
     IPR013078 His_Pase_superF_clade-1

    Graphical View of Domain Structure for InterPro Entry P16118

    ProtoNet protein and cluster: P16118

    2 Blocks protein families:
    IPB001345 Phosphoglycerate/bisphosphoglycerate mutase
    IPB013079 6-phosphofructo-2-kinase


    UniProtKB/Swiss-Prot: F261_HUMAN, P16118
    Similarity: In the C-terminal section; belongs to the phosphoglycerate mutase family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: F261_HUMAN, P16118
    Function: Synthesis and degradation of fructose 2,6-bisphosphate
    Catalytic activity: Beta-D-fructose 2,6-bisphosphate + H(2)O = D-fructose 6-phosphate + phosphate
    Catalytic activity: ATP + D-fructose 6-phosphate = ADP + beta-D-fructose 2,6-bisphosphate
    Enzyme regulation: Phosphorylation results in inhibition of the kinase activity

         Genatlas biochemistry entry for PFKFB1:
    fructose 2,6-P2 synthesis and degradation,bifunctional enzyme,expressed in liver,activated by the binding of HNF3
    (A,B,G) to the glucocorticoid response unit (GRU) antagonized by the binding of HNF6 to the gene (GRU)

         Gene Ontology (GO): 5/7 molecular function terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:00038736-phosphofructo-2-kinase activity TAS12379646
    GO:0004331fructose-2,6-bisphosphate 2-phosphatase activity TAS--
    GO:0005515protein binding IPI11522786
    GO:0005524ATP binding IEA--
    GO:0019900kinase binding IEA--
         
    PFKFB1 for ontologies           About GeneDecksing


    Phenotypes:
         3 GenomeRNAi human phenotypes for PFKFB1:
     Decreased cell number, increas  Decreased focal adhesion (FA)   Decreased viability 

    Animal Models:
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for PFKFB1 

    miRNA
    Products:
        
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat PFKFB1
    3 QIAGEN miScript miRNA Assays for microRNAs that regulate PFKFB1:
    hsa-miR-34b* hsa-miR-3919 hsa-miR-449c
    SwitchGear 3'UTR luciferase reporter plasmidPFKFB1 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for PFKFB1 (see all 7)
    OriGene shRNA RFP: PFKFB1
    OriGene siRNA: PFKFB1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat PFKFB1
    Sirion Biotech Custom design and validation of potent shRNA sequences against PFKFB1 

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for PFKFB1
    Sirion Biotech Customized adenovirus for overexpression of PFKFB1 
    Sirion Biotech Customized adenovirus for potent knockdown of PFKFB1

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for PFKFB1 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for PFKFB1
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: PFKFB1 (NM_002625)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for PFKFB1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PFKFB1 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for PFKFB1
    Search LifeMap BioReagents cell lines for PFKFB1
    Sirion Biotech Customized stable knockdown cell line services for PFKFB1 
    Sirion Biotech Customized inducible knockdown cell line services for PFKFB1
    Sirion Biotech Customized stable overexpressing cell line services for PFKFB1
    Sirion Biotech Customized inducible overexpressing cell line services for PFKFB1

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PFKFB1


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/9 super-pathways (see all 9About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Glucose metabolism
    Glucose metabolism1.00
    Glycolysis0.44
    Gluconeogenesis0.50
    2PKA-mediated phosphorylation of key metabolic factors
    PKA-mediated phosphorylation of key metabolic factors1.00
    3Metabolism
    Metabolism1.00
    4AMPK Enzyme Complex Pathway
    AMPK Enzyme Complex Pathway1.00
    5Akt Signaling
    Akt Signaling1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    2 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for PFKFB1
        AMPK Enzyme Complex Pathway
    Akt Signaling

    5/8        Reactome Pathways for PFKFB1 (see all 8)
        Gluconeogenesis
    PP2A-mediated dephosphorylation of key metabolic factors
    Metabolism of carbohydrates
    PKA-mediated phosphorylation of key metabolic factors
    Metabolism


    1         Kegg Pathway  (Kegg details for PFKFB1):
        Fructose and mannose metabolism


    PFKFB1 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for PFKFB1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 14)

    5/14 Interacting proteins for PFKFB1 (P161181, 2, 3 ENSP000003641454) via UniProtKB, MINT, STRING, and/or I2D (see all 14)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    GCKP355571, 3, ENSP000002233664EBI-709807,EBI-709928 I2D: score=1 STRING: ENSP00000223366
    PASKQ96RG22, 3, ENSP000002340404MINT-8145447 I2D: score=1 STRING: ENSP00000234040
    MAPK3P273613, ENSP000002630254I2D: score=2 STRING: ENSP00000263025
    FBP1ENSP000003644754STRING: ENSP00000364475
    FBP2ENSP000003644864STRING: ENSP00000364486
    About this table

    Gene Ontology (GO): 5/17 biological process terms (GO ID links to tree view) (see all 17):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005975carbohydrate metabolic process TAS--
    GO:0006000fructose metabolic process IEA--
    GO:0006003fructose 2,6-bisphosphate metabolic process IDA2837207
    GO:0006006glucose metabolic process TAS--
    GO:0006094gluconeogenesis TAS--

    PFKFB1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for PFKFB1

    8 HMDB Compounds for PFKFB1    About this table
    CompoundSynonyms CAS #PubMed Ids
    2-Phosphoglyceric acid2-(dihydrogen phosphate)Glycerate (see all 16)2553-59-5--
    ADPadenosindiphosphorsaeure (see all 8)58-64-0--
    Adenosine triphosphate5'-(tetrahydrogen triphosphate) Adenosine (see all 24)56-65-5--
    Beta-D-Fructose 6-phosphatebeta-D-Fructose 6-phosphate (see all 2)----
    D-Fructose 2,6-bisphosphateD-Fructose 2,6-bisphosphate (see all 6)----
    Fructose 6-phosphateD-Fructose 6-phosphate (see all 13)643-13-0--
    PhosphateNFB Orthophosphate (see all 13)14265-44-2--
    WaterDihydrogen oxide (see all 2)7732-18-5--

    5 DrugBank Compounds for PFKFB1    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    3-Phosphoglycerol-- --target--17139284 17016423 10592235
    D-Gluco-2,5-Anhydro-1-Deoxy-1-Phosphonohexitol-6-Phosphate-- --target--17139284 17016423 10592235
    Fructose-6-Phosphate-- --target--17139284 17016423 10592235
    Guanosine-5'-Triphosphate-- 86-01-1target--17139284 17016423 10592235
    Phosphothiophosphoric Acid-Adenylate Ester-- --target--17139284 17016423

    Search CenterWatch for drugs/clinical trials and news about PFKFB1 / F261 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for PFKFB1 gene (3 alternative transcripts): 
    NM_001271804.1  NM_001271805.1  NM_002625.3  

    Unigene Cluster for PFKFB1:

    6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
    Hs.444304  [show with all ESTs]
    Unigene Representative Sequence: NM_002625
    3 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000375006(uc004dty.1 uc010nkd.1) ENST00000545676(uc011mol.1)
    ENST00000374992

    miRNA
    Products:
         
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat PFKFB1
    3 QIAGEN miScript miRNA Assays for microRNAs that regulate PFKFB1:
    hsa-miR-34b* hsa-miR-3919 hsa-miR-449c
    SwitchGear 3'UTR luciferase reporter plasmidPFKFB1 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for PFKFB1 (see all 7)
    OriGene shRNA RFP: PFKFB1
    OriGene siRNA: PFKFB1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat PFKFB1
    Sirion Biotech Custom design and validation of potent shRNA sequences against PFKFB1 
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for PFKFB1 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for PFKFB1
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: PFKFB1 (NM_002625)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for PFKFB1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PFKFB1 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for PFKFB1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat PFKFB1
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat PFKFB1
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat PFKFB1

    Additional cDNA sequence: 

    AK300724.1 AK314089.1 BC096077.1 BC096078.2 BC096079.3 JQ425694.1 JQ425695.1 M19938.1 
    NR_073450.1 X52638.1 

    4 DOTS entries:

    DT.408513  DT.412060  DT.121317561  DT.406752 

    8 AceView cDNA sequences:

    BX282257 H47320 NM_002625 X52638 M19938 AL703826 T62884 H47404 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    PFKFB1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: AAGAGGACCA
    PFKFB1 Expression
    About this image

    PFKFB1 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    2 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    LiverLiver LobulePerivenous HepatocytesLiver
    LimbHindlimb Ventral MuscleLimb
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See PFKFB1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for PFKFB1

    SOURCE GeneReport for Unigene cluster: Hs.444304

    UniProtKB/Swiss-Prot: F261_HUMAN, P16118
    Tissue specificity: Liver

        SABiosciences Custom PCR Arrays for PFKFB1
    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for PFKFB1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat PFKFB1
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat PFKFB1
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat PFKFB1
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PFKFB1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for PFKFB1 gene from 8/33 species (see all 33)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves PFKFB41 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase more 74.01(n)
    80.99(a)
      415906  NM_001030584.1  NP_001025755.1 
    lizard
    (Anolis carolinensis)
    Reptilia PFKFB16
    --
    85(a)
    1 ↔ 1
    1(205678970-205697031)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.159962 Xenopus laevis transcribed sequence with moderate similarity more 78.11(n)    CA788288.1 
    zebrafish
    (Danio rerio)
    Actinopterygii wufi11h102 wufi11h10 76.91(n)   327453  BC044142.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Pfrx6
    6-phosphofructo-2-kinase
    38(a)
    1 → many
    X(19389538-19403390)
    worm
    (Caenorhabditis elegans)
    Secernentea Y110A7A.6b3   -- 55(a)
    (best of 3)
      I(5131526-5133910)   --
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons F2KP6
    fructose-2,6-bisphosphatase
    25(a)
    possible ortholog
    1(2178104-2184148)
    rice
    (Oryza sativa)
    Liliopsida AK069285.12   -- 70.58(n)    AK069285.1 


    ENSEMBL Gene Tree for PFKFB1 (if available)
    TreeFam Gene Tree for PFKFB1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for PFKFB1 gene
    PFKFB32  PFKFB22  PFKFB42  
    4 SIMAP similar genes for PFKFB1 using alignment to 6 protein entries:     F261_HUMAN (see all proteins):
    DKFZp781D2217    PFKFB2    PFKFB4    PFKFB3

    PFKFB1 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/623 NCBI SNPs in PFKFB1 are shown (see all 623    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr X posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1864012791,2
    --54959247(+) GTCAGA/GGGACT 1 -- ds50010--------
    rs582508911,2
    C--54959366(+) CCTGAA/GTATAA 1 -- ds50011Minor allele frequency- G:0.00WA 2
    rs59600561,2
    C--54959498(+) TCACCG/CATTCC 1 -- ds50011Minor allele frequency- C:0.00CSA 1
    rs2001841471,2
    --54959733(+) TGGGG-/TTGCCT 1 -- ut310--------
    rs1487275751,2
    --54959763(+) TAGGAG/TAAGAG 1 -- ut310--------
    rs1912096551,2
    C--54959833(+) GAAAGC/GGCTCA 1 -- ut310--------
    rs563614081,2
    C--54959921(+) TAATAA/GGAAGG 1 -- int10--------
    rs1833288231,2
    --54959966(+) CTCTTC/GTCTTC 1 -- int10--------
    rs1887931821,2
    --54960135(+) TTGCTC/TCATCT 1 -- int10--------
    rs2017301761,2
    --54960280(+) GTTCAC/TGGCCT 2 M V mis10--------

    HapMap Linkage Disequilibrium report for PFKFB1 (54959394 - 55024967 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for PFKFB1
         1 CNV: 23256
    Locus Specific Mutation Databases (LSDB): PFKFB1

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing PFKFB1
    DNA2.0 Custom Variant and Variant Library Synthesis for PFKFB1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    PFKFB1 for disorders           About GeneDecksing

    OMIM gene information: 311790    OMIM disorders: --

    4 diseases for PFKFB1:    About MalaCards
    gastric cancer    pancreatic cancer    pancreatitis    hepatitis

    Human Genome Epidemiology (HuGE) Navigator: PFKFB1 (1 document)
    Tumor Gene Database (TGDB): PFKFB1

    Export disorders for PFKFB1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for PFKFB1 gene, integrated from 9 sources (see all 23):
    (articles sorted by number of sources associating them with PFKFB1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Localization of human liver 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase (PFKFB1) within a YAC contig in Xp11.21. (PubMed id 9119406)1, 3, 9 Batra R.S....Craig I.W. (1997)
    2. The DNA sequence of the human X chromosome. (PubMed id 15772651)1, 2 Ross M.T.... Bentley D.R. (2005)
    3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    4. Sequence of human liver 6-phosphofructo-2-kinase/fructose-2,6- bisphosphatase. (PubMed id 2163524)1, 2 Lange A.J. and Pilkis S.J. (1990)
    5. Molecular cloning, sequence analysis, and expression of a human liver cDNA coding for fructose-6-P,2-kinase:fructose-2,6-bisphosphatase. (PubMed id 2837207)1, 2 Algaier J. and Uyeda K. (1988)
    6. Interactions of pathological hallmark proteins: tubul in polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PubMed id 21832049)1 OlA!h J....OvA!di J. (2011)
    7. Perioperative genomic profiles using structure-specif ic oligonucleotide probes. (PubMed id 19474452)1 Hogan K.J....Domanico M.J. (2009)
    8. Protein interaction data set highlighted with human Ras-MAPK/PI3K signaling pathways. (PubMed id 18624398)1 Wang J....He F. (2008)
    9. Drugs, their targets and the nature and number of dru g targets. (PubMed id 17016423)7 Imming P....Meyer A. (2006)
    10. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PubMed id 16344560)1 Kimura K.... Sugano S. (2006)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 5207 HGNC: 8872 AceView: PFKFB1 Ensembl:ENSG00000158571 euGenes: HUgn5207
    ECgene: PFKFB1 Kegg: 5207 H-InvDB: PFKFB1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for PFKFB1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for PFKFB1 gene:
    Search GeneIP for patents involving PFKFB1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for PFKFB1  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for PFKFB1   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for PFKFB1  
     OriGene Protein Over-expression Lysate for PFKFB1   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for PFKFB1   Browse 3'-UTR reporter clones for miRNA target validation  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for PFKFB1   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for PFKFB1  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     OriGene Purified Protein for PFKFB1   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for PFKFB1   OriGene Custom Protein Services for PFKFB1  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat PFKFB1
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing PFKFB1
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PFKFB1
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat PFKFB1
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat PFKFB1
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat PFKFB1
     GenScript Custom Purified and Recombinant Proteins Services for PFKFB1 GenScript cDNA clones with any tag delivered in your preferred vector for PFKFB1
     GenScript Custom Assay Services for PFKFB1 GenScript Custom Superior Antibodies Services for PFKFB1
     GenScript Custom overexpressing Cell Line Services for PFKFB1 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in PFKFB1 promoter
     Search Chromatin IP Primers for PFKFB1
     RT2 qPCR Primer Assay in human, mouse, rat PFKFB1
     Search GNC Networks for PFKFB1
     SABiosciences PCR Arrays including human, mouse, rat PFKFB1
     Search Tocris compounds for PFKFB1
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     PFKFB1 antibodies
     PFKFB1 proteins
     PFKFB1 lysates
     Antibodies for PFKFB1
     See all of Abcam's Antibodies, Kits and Proteins for PFKFB1
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     PFKFB1 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for PFKFB1
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PFKFB1
     SwitchGear 3'UTR luciferase reporter plasmids for PFKFB1
     SwitchGear Promoter luciferase reporter plasmids for PFKFB1
     ThermoFisher Antibodies for PFKFB1
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PFKFB1
     inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for PFKFB1
    Sirion Biotech Customized:
     stable knockdown cell line services for PFKFB1
     inducible knockdown cell line services for PFKFB1
     design and validation of potent shRNA sequences against PFKFB1
     adenovirus for potent knockdown of PFKFB1
     adenovirus for overexpression of PFKFB1
     stable overexpressing cell line services for PFKFB1
     inducible overexpressing cell line services for PFKFB1
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013 , 14 May 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      PFKFB1 gene at Home site.
    hostname: 356980-web2.xennexinc.com index build: 106 solr: 1.4