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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

PDE8B Gene

protein-coding   GIFtS: 64
GCID: GC05P076542

phosphodiesterase 8B

 Explore 14 diseases affiliated with
PDE8B via our new
 Human Malady Compendium 
Biological research products
for PDE8B
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Phosphodiesterase 8B1 2     3',5' Cyclic Nucleotide Phosphodiesterase 8B2
Cell Proliferation-Inducing Gene 22 Protein2 3     High Affinity CAMP-Specific And IBMX-Insensitive 3',5'-Cyclic Phosphodiesterase
8B2
EC 3.1.4.173 8     HsPDE8B3
ADSD2 5     HsPDE8B3
PPNAD32 5     

External Ids:    HGNC: 87941   Entrez Gene: 86222   Ensembl: ENSG000001132317   OMIM: 6033905   UniProtKB: O952633   

Export aliases for PDE8B gene to outside databases

Previous GC identifers: GC05P075312 GC05P076741 GC05P076545 GC05P076590 GC05P071714


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for PDE8B:
The protein encoded by this gene is a cyclic nucleotide phosphodiesterase (PDE) that catalyzes the hydrolysis of the
second messenger cAMP. The encoded protein, which does not hydrolyze cGMP, is resistant to several PDE inhibitors.
Defects in this gene are a cause of autosomal dominant striatal degeneration (ADSD). Several transcript variants
encoding different isoforms have been found for this gene.(provided by RefSeq, Jul 2010)

UniProtKB/Swiss-Prot: PDE8B_HUMAN, O95263
Function: Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes. May
be involved in specific signaling in the thyroid gland

summary for PDE8B:
Phosphodiesterases (PDEs) are a family of related phosphohydrolyases that selectively catalyze the
hydrolysis of 3' cyclic phosphate bonds in adenosine and/or guanine 3',5' cyclic monophosphate (cAMP and/or
cGMP). They regulate the cellular levels, localization and duration of action of these second messengers by
controlling the rate of their degradation. There are 11 subtypes of PDEs, named PDE1-11; PDE4, 7 and 8
selectively degrade cAMP, PDE5, 6 and 9 selectively degrade cGMP and PDE1, 2, 3, 10 and 11 degrade both
cyclic nucleotides. PDEs are expressed ubiquitously, with each subtype having a specific tissue
distribution. These enzymes are involved in many signal transduction pathways and their functions include
vascular smooth muscle proliferation and contraction, cardiac contractility, platelet aggregation, hormone
secretion, immune cell activation, and they are involved in learning and memory.

Gene Wiki entry for PDE8B


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000005.9  NC_018916.1  NT_006713.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the PDE8B gene promoter:
         C/EBPbeta   FOXF2   Evi-1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidPDE8B promoter sequence
   Search SABiosciences Chromatin IP Primers for PDE8B

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PDE8B


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 5q13.3   Ensembl cytogenetic band:  5q13.3   HGNC cytogenetic band: 5q14.1

PDE8B Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
PDE8B gene location

GeneLoc information about chromosome 5         GeneLoc Exon Structure

GeneLoc location for GC05P076542:  view genomic region     (about GC identifiers)

Start:
76,506,274 bp from pter      End:
76,725,632 bp from pter
Size:
219,359 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: PDE8B_HUMAN, O95263 (See protein sequence)
Recommended Name: High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B  
Size: 885 amino acids; 98979 Da
Cofactor: Binds 2 divalent metal cations per subunit. Site 1 may preferentially bind zinc ions, while site 2 has a
preference for magnesium and/or manganese ions (By similarity)
Secondary accessions: Q5J7V7 Q86XK8 Q8IUJ7 Q8IUJ8 Q8IUJ9 Q8IUK0 Q8N3T2
Alternative splicing: 6 isoforms:  O95263-1   O95263-2   O95263-3   O95263-4   O95263-5   O95263-6   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for PDE8B: NX_O95263

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_O95263

  • 2 DME Specific Peptides for PDE8B (O95263)
     HDVDHPG  IDMVLAT 

    PDE8B Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (5 alternative transcripts): 
    NP_001025022.1  NP_001025023.1  NP_001025024.1  NP_001025025.1  NP_003710.1  

    ENSEMBL proteins: 
     ENSP00000425720   ENSP00000345446   ENSP00000330428   ENSP00000264917   ENSP00000345646  
     ENSP00000331336   ENSP00000426200   ENSP00000422861   ENSP00000423461  
    Reactome Protein details: O95263
    Human Recombinant Protein Products: 
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    Uscn Proteins for PDE8B

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005575cellular_component ND--
    GO:0005622intracellular ----
    GO:0005829cytosol TAS--


    PDE8B for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    PDE8B for domains           About GeneDecksing

    5/7 InterPro domains/families (see all 7):
     IPR002073 PDEase_catalytic_dom
     IPR000014 PAS
     IPR013938 PDEase_PDE8
     IPR023174 PDEase_CS
     IPR023088 PDEase

    Graphical View of Domain Structure for InterPro Entry O95263

    ProtoNet protein and cluster: O95263

    3 Blocks protein families:
    IPB000014 PAS domain
    IPB013767 PAS fold
    IPB013938 3'5'-cyclic nucleotide phosphodiesterase PDE8


    UniProtKB/Swiss-Prot: PDE8B_HUMAN, O95263
    Domain: Composed of a C-terminal catalytic domain containing two putative divalent metal sites and an N-terminal
    regulatory domain
    Similarity: Belongs to the cyclic nucleotide phosphodiesterase family. PDE8 subfamily
    Similarity: Contains 1 PAS (PER-ARNT-SIM) domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: PDE8B_HUMAN, O95263
    Function: Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes. May
    be involved in specific signaling in the thyroid gland
    Catalytic activity: Adenosine 3',5'-cyclic phosphate + H(2)O = adenosine 5'-phosphate
    Enzyme regulation: Inhibited by dipyridimole. Insensitive to selective PDE inhibitors including rolipram and milrinone
    as well as to the non-selective inhibitor, IBMX. Unaffected by cGMP

    Enzyme Number (IUBMB): EC 3.1.4.171 2

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    Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000156phosphorelay response regulator activity IEA--
    GO:00041143',5'-cyclic-nucleotide phosphodiesterase activity NAS9784418
    GO:0004871signal transducer activity ----
    GO:0046872metal ion binding IEA--


    PDE8B for ontologies           About GeneDecksing



    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Signaling by GPCR
    Signaling by GPCR1.00
    Signal Transduction0.56
    GPCR downstream signaling0.89
    2G Protein Signaling Pathways
    G Protein Signaling Pathways1.00
    3Purine metabolism
    Purine metabolism1.00
    4G beta:gamma signalling through PLC beta
    G alpha (s) signalling events0.14

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    1 BioSystems Pathway for PDE8B 
        G Protein Signaling Pathways

    4        Reactome Pathways for PDE8B
        GPCR downstream signaling
    Signal Transduction
    Signaling by GPCR
    G alpha (s) signalling events


    1         Kegg Pathway  (Kegg details for PDE8B):
        Purine metabolism

    UniProtKB/Swiss-Prot: PDE8B_HUMAN, O95263
    Pathway: Purine metabolism; 3',5'-cyclic AMP degradation; AMP from 3',5'-cyclic AMP: step 1/1


    PDE8B for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PDE8B

    STRING Interaction Network Preview (showing 5 interactants - click image to see 12)

    5/12 Interacting proteins for PDE8B (ENSP000002649174) via UniProtKB, MINT, STRING, and/or I2D (see all 12)

    InteractantInteraction Details
    GeneCardExternal ID(s)
    ADCY2ENSP000003429524STRING: ENSP00000342952
    GNAI2ENSP000003129994STRING: ENSP00000312999
    GNASENSP000003601414STRING: ENSP00000360141
    GNAZENSP000002489964STRING: ENSP00000248996
    ADCY1ENSP000002973234STRING: ENSP00000297323
    About this table

    Gene Ontology (GO): 4 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006198cAMP catabolic process IEA--
    GO:0006355regulation of transcription, DNA-dependent IEA--
    GO:0009187cyclic nucleotide metabolic process NAS9784418
    GO:0046676negative regulation of insulin secretion IEA--


    PDE8B for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    PDE8B for compounds           About GeneDecksing

    EMD Millipore small molecules for PDE8B:
    Small Molecule - inhibitor
    Browse drugs & compounds from Enzo Life Sciences

    Compounds for PDE8B available from Tocris Bioscience    About this table
    CompoundAction CAS #
    DipyridamoleAdenosine transport inhibitor[58-32-2]

    5 HMDB Compounds for PDE8B    About this table
    CompoundSynonyms CAS #PubMed Ids
    Adenosine monophosphate5'-AMP (see all 28)61-19-8--
    Cyclic AMPCyclic AMP (see all 19)60-92-4--
    Cyclic GMP3',5'-cyclic GMP (see all 13)7665-99-8--
    Guanosine monophosphate5'-GMP (see all 14)85-32-5--
    WaterDihydrogen oxide (see all 2)7732-18-5--

    1 DrugBank Compound for PDE8B    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    KetotifenKetotifen Fumarate (see all 5)34580-14-8targetinhibitor1702263

    2 Novoseek chemical compound relationships for PDE8B gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    dipyridamole 51.2 1 9784418 (1)
    cgmp 36.3 2 9784418 (1)

    Search CenterWatch for drugs/clinical trials and news about PDE8B 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for PDE8B gene (5 alternative transcripts): 
    NM_001029851.2  NM_001029852.2  NM_001029853.2  NM_001029854.2  NM_003719.3  

    Unigene Cluster for PDE8B:

    Phosphodiesterase 8B
    Hs.584830  [show with all ESTs]
    Unigene Representative Sequence: NM_003719
    9 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000505926 ENST00000340978 ENST00000346042 ENST00000264917(uc003kfa.3 uc003kfb.3 uc003kfc.3 uc003kfd.3 uc003kfe.3)
    ENST00000342343 ENST00000333194 ENST00000502945 ENST00000503963 ENST00000505283


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    hsa-miR-495 hsa-miR-520d-5p hsa-miR-1263 hsa-miR-513a-5p hsa-miR-1271 hsa-miR-128 hsa-miR-218 hsa-miR-103a
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    Additional cDNA sequence: 

    AB085824.1 AB085825.1 AB085826.1 AB085827.1 AF079529.2 AK002074.1 AK023913.1 AL831924.1 
    AY129948.1 AY129949.1 AY423729.1 BC035144.1 BC043209.2 BC047627.1 

    15 DOTS entries:

    DT.100777747  DT.113855  DT.40210111  DT.100027276  DT.120884499  DT.100777748  DT.91809565  DT.95268672 
    DT.95251467  DT.85102318  DT.95268673  DT.95351255  DT.120884506  DT.120884515  DT.40217348 

    24/120 AceView cDNA sequences (see all 120):

    BU731978 AI381656 AB085826 BU071384 AA862306 BU781796 BE140794 BF109581 
    AA669493 BU786861 AL133979 CB054667 AA280111 BM708128 BF108895 AI272300 
    BU787669 BU786921 CF994628 BM505631 AA348672 AA233993 AU141620 CK825436 

    GeneLoc Exon Structure

    5/6 Alternative Splicing Database (ASD) splice patterns (SP) for PDE8B (see all 6)    About this scheme

    ExUns: 1 ^ 2a · 2b · 2c ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19 ^ 20 ^ 21 ^ 22 ^ 23
    SP1:                                                                                                                                                      
    SP2:                                                                                                  -                                                   
    SP3:                          -                                                                                                                           
    SP4:                                                              -     -     -                                                                           
    SP5:        -     -                                                                                                                                       


    ECgene alternative splicing isoforms for PDE8B

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    PDE8B expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CAAAGAAATG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    PDE8B expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    2 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    EyeOuter Nuclear LayerMature Rod CellsPhotoreceptors, Retina
    SomiteLumbar Vertebral BodySomite
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 2 LifeMap Cells 
    NameCategory
    HyStem+BMP4-induced SK11 cells (HyStem+BMP4 inductio...)Bone, Cartilage
    HyStem+BMP4-induced 7SMOO32 cells (HyStem+BMP4 inductio...)Adipose

    See PDE8B Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for PDE8B

    SOURCE GeneReport for Unigene cluster: Hs.584830

    UniProtKB/Swiss-Prot: PDE8B_HUMAN, O95263
    Tissue specificity: Abundantly expressed in the thyroid. Also very weakly expressed in brain, spinal cord and placenta.
    In the thyroid isoform 1 predominates, and isoforms 2 and 6 are also highly expressed. In the placenta isoforms 1 and
    2 are expressed equally. In the brain isoform 2 predominates

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for PDE8B gene from 5/19 species (see all 19)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves PDE8B1 phosphodiesterase 8B 77.49(n)
    82.75(a)
      427645  XM_425218.3  XP_425218.3 
    lizard
    (Anolis carolinensis)
    Reptilia PDE8B6
    --
    87(a)
    1 ↔ 1
    2(13947894-13973346)
    zebrafish
    (Danio rerio)
    Actinopterygii Dr.112952 Transcribed sequence with weak similarity to protein more 74.88(n)    BG307503.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG54113
    Pde81
    cAMP-specific phosphodiesterase3
    Phosphodiesterase 81
    49(a)3
    48.87(n)1
    40.98(a)1
      377411  NM_166618.21  NP_726352.11 
    worm
    (Caenorhabditis elegans)
    Secernentea Y95B8A.103 phosphodiesterase 39(a)   I(873483-882715)   --


    ENSEMBL Gene Tree for PDE8B (if available)
    TreeFam Gene Tree for PDE8B (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for PDE8B gene
    PDE4D2  PDE3A2  PDE4B2  PDE4C2  PDE1B2  PDE1A2  PDE7B2  PDE9A2  
    PDE1C2  PDE7A2  PDE8A2  PDE4A2  PDE3B2  
    10 SIMAP similar genes for PDE8B using alignment to 6 protein entries:     PDE8B_HUMAN (see all proteins):
    PDE8A    PDE4A    PDE4    PDE4D    PDE4B5    PDE4C
    PDE1A    PDE3B    PDE1B    PDE9A

    PDE8B for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for PDE8B
    PGOHUM00000246779


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/3419 NCBI SNPs in PDE8B are shown (see all 3419    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 5 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1180770801,2
    C,F,--71712439(+) CGGGAT/GAGAAA 5 -- us2k11Minor allele frequency- G:0.03EA 120
    rs747136971,2
    F,--71713812(+) GCAGAA/GGGAAG 5 -- int11Minor allele frequency- G:0.12WA 118
    rs68730971,2
    C,--71714004(+) GCCCCA/GTATTC 5 -- int10--------
    rs784904251,2
    F,--71714844(+) ATAGTA/GAAAAC 5 -- int11Minor allele frequency- G:0.14WA 118
    rs576642061,2
    C,F,--71715037(+) CAAGCT/GCTCTC 5 -- int15Minor allele frequency- G:0.25WA CSA NA 244
    rs1141472991,2
    C,F,--71716812(+) CCTGTA/GAAATG 5 -- int11Minor allele frequency- G:0.03WA 118
    rs569372831,2
    C,--71716815(+) GTAAAA/GTGGTG 5 -- int12Minor allele frequency- G:0.27WA 120
    rs606768991,2
    C,F,--71717563(+) TACAGG/ACACAT 5 -- int15Minor allele frequency- A:0.18WA CSA NA 244
    rs762664661,2
    F,--71718291(+) CAATCG/AGAGGG 5 -- int11Minor allele frequency- A:0.10WA 118
    rs1135464021,2
    C,--71719274(+) TGTGAC/TGGGCA 5 -- int11Minor allele frequency- T:0.50NA 2

    HapMap Linkage Disequilibrium report for PDE8B (76506274 - 76725632 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 5 variations for PDE8B
         2 CNVs: 64235 99175
         3 Indels: 60537 69151 99176
    Human Gene Mutation Database (HGMD): PDE8B

    SABiosciences Cancer Mutation PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    PDE8B for disorders           About GeneDecksing

    OMIM gene information: 603390   
    OMIM disorders: 609161  
    UniProtKB/Swiss-Prot: PDE8B_HUMAN, O95263
  • Defects in PDE8B are the cause of striatal degeneration autosomal dominant (ADSD) [MIM:609161]. It is a
  • movement disorder affecting the striatal part of the basal ganglia and characterized by bradykinesia, dysarthria and
    muscle rigidity. These symptoms resemble idiopathic Parkinson disease, but tremor is not present
  • Defects in PDE8B are the cause of primary pigmented nodular adrenocortical disease type 3 (PPNAD3)
  • [MIM:614190]. PPNAD3 is a rare bilateral adrenal defect causing ACTH-independent Cushing syndrome. Macroscopic
    appearance of the adrenals is characteristic with small pigmented micronodules observed in the cortex. Adrenal glands
    show overall normal size and weight, and multiple small yellow-to-dark brown nodules surrounded by a cortex with a
    uniform appearance. Microscopically, there are moderate diffuse cortical hyperplasia with mostly nonpigmented nodules,
    multiple capsular deficits and massive circumscribed and infiltrating extra-adrenal cortical excrescences with
    micronodules. Clinical manifestations of Cushing syndrome include facial and trunkal obesity, abdominal striae,
    muscular weakness, osteoporosis, arterial hypertension, diabetes

    14 diseases for PDE8B:    About MalaCards
    striatal degeneration    pigmented nodular adrenocortical disease, primary, 3    striatal degeneration, autosomal dominant    primary pigmented nodular adrenocortical disease
    carney complex    cushing's syndrome    adrenal hyperplasia    tremor
    hypothyroidism    parkinson's disease    osteoporosis    alzheimer's disease
    thyroiditis    malaria

    1 disease from the University of Copenhagen DISEASES database for PDE8B:
    Carney complex
    Human Genome Epidemiology (HuGE) Navigator: PDE8B (6 documents)

    Export disorders for PDE8B gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for PDE8B gene, integrated from 9 sources (see all 31):
    (articles sorted by number of sources associating them with PDE8B)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Molecular cloning and characterization of human PDE8B, a novel thyroid-specific isozyme of 3',5'-cyclic nucleotide phosphodiesterase. (PubMed id 9784418)1, 2, 3, 9 Hayashi M.... Tanaka T. (1998)
    2. A cAMP-specific phosphodiesterase (PDE8B) that is mutated in adrenal hyperplasia is expressed widely in human and mouse tissues: a novel PDE8B isoform in human adrenal cortex. (PubMed id 18431404)1, 2, 9 Horvath A....Stratakis C.A. (2008)
    3. Genomic organization, chromosomal localization, and alternative splicing of the human phosphodiesterase 8B gene. (PubMed id 12372422)1, 2, 9 Hayashi M.... Tanaka T. (2002)
    4. Autosomal-dominant striatal degeneration is caused by a mutation in the phosphodiesterase 8B gene. (PubMed id 20085714)1, 2, 9 Appenzeller S....KuhlenbAoumer G. (2010)
    5. Comparison of enzymatic characterization and gene organization of cyclic nucleotide phosphodiesterase 8 family in humans. (PubMed id 12681444)1, 2, 9 Gamanuma M.... Omori K. (2003)
    6. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    7. Abnormalities of cAMP signaling are present in adrenocortical lesions associated with corticotropin-independent Cushing syndrome despite the absence of mutations in known genes. (PubMed id 19429701)1, 9 Bimpaki E....Stratakis C. (2009)
    8. Haplotype analysis of the promoter region of phosphod iesterase type 8B (PDE8B) in correlation with inactivating PDE8B mutation and t he serum thyroid-stimulating hormone levels. (PubMed id 20373981)1, 9 Horvath A....Stratakis C.A. (2010)
    9. Alterations on phosphodiesterase type 7 and 8 isozyme mRNA expression in Alzheimer's disease brains examined by in situ hybridization. (PubMed id 12895443)1, 9 Perez-Torres S....Mengod G. (2003)
    10. Phosphodiesterase 8B gene polymorphism is associated with subclinical hypothyroidism in pregnancy. (PubMed id 19820008)1, 9 Shields B.M....Vaidya B. (2009)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
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    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 8622 HGNC: 8794 AceView: PDE8B Ensembl:ENSG00000113231 euGenes: HUgn8622
    ECgene: PDE8B Kegg: 8622 H-InvDB: PDE8B

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for PDE8B Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for PDE8B gene:
    Search GeneIP for patents involving PDE8B

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    About This Section

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    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 27 Apr 2013

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