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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

PDCD10 Gene

protein-coding   GIFtS: 54
GCID: GC03M167381

programmed cell death 10

(Previous name: cerebral cavernous malformations 3 )
(Previous symbol: CCM3)
 Explore 18 diseases affiliated with
PDCD10 via our new
 Human Malady Compendium 
Biological research products
for PDCD10
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Programmed Cell Death 101 2     TF-1 Cell Apoptosis-Related Protein 152 3
CCM31 2 3 5     Cerebral Cavernous Malformations 31
TFAR151 2 3 5     Apoptosis-Related Protein 152
Cerebral Cavernous Malformations 3 Protein2 3     Programmed Cell Death Protein 102

External Ids:    HGNC: 87611   Entrez Gene: 112352   Ensembl: ENSG000001142097   OMIM: 6091185   UniProtKB: Q9BUL83   

Export aliases for PDCD10 gene to outside databases

Previous GC identifers: GC03M164691 GC03M168454 GC03M168803 GC03M168722 GC03M168884


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for PDCD10:
This gene encodes an evolutionarily conserved protein associated with cell apoptosis. The protein interacts with the
serine/threonine protein kinase MST4 to modulate the extracellular signal-regulated kinase (ERK) pathway. It also
interacts with and is phosphoryated by serine/threonine kinase 25, and is thought to function in a signaling pathway
essential for vascular developent. Mutations in this gene are one cause of cerebral cavernous malformations, which are
vascular malformations that cause seizures and cerebral hemorrhages. Multiple alternatively spliced variants, encoding
the same protein, have been identified. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: PDC10_HUMAN, Q9BUL8
Function: Promotes cell proliferation. Modulates apoptotic pathways. Increases mitogen-activated protein kinase
activity and MST4 activity. Important for cell migration, and for normal structure and assembly of the Golgi complex.
Important for KDR/VEGFR2 signaling. Increases the stability of KDR/VEGFR2 and prevents its breakdown. Required for
normal cardiovascular development. Required for normal angiogenesis, vasculogenesis and hematopoiesis during embryonic
development (By similarity)

Gene Wiki entry for PDCD10


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000003.11  NC_018914.1  NT_005612.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the PDCD10 gene promoter:
         p300   NF-E2 p45   NF-E2   GATA-1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidPDCD10 promoter sequence
   Search SABiosciences Chromatin IP Primers for PDCD10

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PDCD10


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 3q26.1   Ensembl cytogenetic band:  3q26.1   HGNC cytogenetic band: 3q26.1

PDCD10 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
PDCD10 gene location

GeneLoc information about chromosome 3         GeneLoc Exon Structure

GeneLoc location for GC03M167381:  view genomic region     (about GC identifiers)

Start:
167,401,086 bp from pter      End:
167,452,727 bp from pter
Size:
51,642 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: PDC10_HUMAN, Q9BUL8 (See protein sequence)
Recommended Name: Programmed cell death protein 10  
Size: 212 amino acids; 24702 Da
Subunit: Homodimer. Interacts (via C-terminus) with CCM2 and PXN. Interacts (via N-terminus) with MST4, STK24 and
STK25. Interacts with GOLGA2. Identified in a complex with CCM1 and CCM2. Interacts with KDR/VEGFR2. Interaction with
KDR/VEGFR2 is enhanced by stimulation with VEGFA (By similarity)
Subcellular location: Cytoplasm. Golgi apparatus membrane; Peripheral membrane protein; Cytoplasmic side. Cell
membrane; Peripheral membrane protein; Cytoplasmic side. Note=Partially co-localizes with endogenous PXN at the
leading edges of migrating cells
6 PDB 3D structures from and Proteopedia for PDCD10:
3AJM (3D)        3L8I (3D)        3L8J (3D)        3RQE (3D)        3RQF (3D)        3RQG (3D)    
Secondary accessions: A8K515 D3DNN5 O14811

Explore the universe of human proteins at neXtProt for PDCD10: NX_Q9BUL8

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9BUL8

  • PDCD10 Protein expression data from MOPED and PaxDb:    About this image 
    PDCD10 Protein Expression
    REFSEQ proteins (3 alternative transcripts): 
    NP_009148.2  NP_665858.1  NP_665859.1  

    ENSEMBL proteins: 
     ENSP00000376506   ENSP00000418317   ENSP00000420553   ENSP00000417309   ENSP00000420021  
     ENSP00000417202   ENSP00000417118   ENSP00000420266   ENSP00000417876   ENSP00000420308  
     ENSP00000420424   ENSP00000420014   ENSP00000420450   ENSP00000418160  

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    Novus Biologicals PDCD10 Proteins
    Novus Biologicals PDCD10 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for PDCD10

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000139Golgi membrane IEA--
    GO:0005829cytosol IDA17360971
    GO:0005886plasma membrane IEA--

    PDCD10 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    PDCD10 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR009652 DUF1241

    Graphical View of Domain Structure for InterPro Entry Q9BUL8

    ProtoNet protein and cluster: Q9BUL8

    UniProtKB/Swiss-Prot: PDC10_HUMAN, Q9BUL8
    Similarity: Belongs to the PDCD10 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: PDC10_HUMAN, Q9BUL8
    Function: Promotes cell proliferation. Modulates apoptotic pathways. Increases mitogen-activated protein kinase
    activity and MST4 activity. Important for cell migration, and for normal structure and assembly of the Golgi complex.
    Important for KDR/VEGFR2 signaling. Increases the stability of KDR/VEGFR2 and prevents its breakdown. Required for
    normal cardiovascular development. Required for normal angiogenesis, vasculogenesis and hematopoiesis during embryonic
    development (By similarity)

         Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515protein binding IPI18782753
    GO:0042803protein homodimerization activity IPI--
    GO:0047485protein N-terminus binding IPI--
         
    PDCD10 for ontologies           About GeneDecksing


    Phenotypes:
         1 GenomeRNAi human phenotype for PDCD10:
     Increased cell death HMECs cel 

         15 MGI mutant phenotypes (inferred from 5 alleles(MGI details for Pdcd10):
     behavior/neurological  cardiovascular system  cellular  craniofacial  embryogenesis 
     growth/size  hematopoietic system  immune system  integument  mortality/aging 
     muscle  nervous system  normal  tumorigenesis  vision/eye 

    PDCD10 for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-out Pdcd10tm1.1Wmin for PDCD10
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for PDCD10 

    miRNA
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    8/39 QIAGEN miScript miRNA Assays for microRNAs that regulate PDCD10 (see all 39):
    hsa-miR-21* hsa-miR-4272 hsa-miR-30d hsa-miR-4315 hsa-miR-374a hsa-miR-30a hsa-miR-186 hsa-miR-642b
    SwitchGear 3'UTR luciferase reporter plasmidPDCD10 3' UTR sequence
    Inhib. RNA
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    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PDCD10


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Validated targets of C-MYC transcriptional activation
    Validated targets of C-MYC transcriptional activation1.00


    1 BioSystems Pathway for PDCD10 
        Validated targets of C-MYC transcriptional activation


    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PDCD10

    5/28 Interacting proteins for PDCD10 (Q9BUL81, 2, 3) via UniProtKB, MINT, STRING, and/or I2D (see all 28)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    CCM2Q9BSQ51, 2, 3EBI-2556229,EBI-1573056 MINT-8404432 I2D: score=1 
    STK24Q9Y6E01, 3EBI-2556229,EBI-1054809 I2D: score=5 
    STK25O005061, 3EBI-2556229,EBI-5773834 I2D: score=5 
    STRNO438151, 3EBI-2556229,EBI-1046642 I2D: score=2 
    PTPN13Q129231, 3EBI-2556229,EBI-355227 I2D: score=1 
    About this table

    Gene Ontology (GO): 5 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001525angiogenesis IEA--
    GO:0006915apoptotic process IEA--
    GO:0008284positive regulation of cell proliferation IDA17360971
    GO:0043066negative regulation of apoptotic process IDA17360971
    GO:0043406positive regulation of MAP kinase activity IDA17360971

    PDCD10 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for PDCD10
    Search CenterWatch for drugs/clinical trials and news about PDCD10 / PDC10 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for PDCD10 gene (3 alternative transcripts): 
    NM_007217.3  NM_145859.1  NM_145860.1  

    Unigene Cluster for PDCD10:

    Programmed cell death 10
    Hs.478150  [show with all ESTs]
    Unigene Representative Sequence: BC002506
    18 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000392750(uc003fex.3) ENST00000473645(uc003fey.3 uc003fez.3)
    ENST00000497056 ENST00000492396 ENST00000461494 ENST00000470131 ENST00000475915
    ENST00000487947 ENST00000471885 ENST00000479121 ENST00000462725 ENST00000492139
    ENST00000483451 ENST00000494502 ENST00000462830 ENST00000464360 ENST00000481136
    ENST00000487678

    miRNA
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    8/39 QIAGEN miScript miRNA Assays for microRNAs that regulate PDCD10 (see all 39):
    hsa-miR-21* hsa-miR-4272 hsa-miR-30d hsa-miR-4315 hsa-miR-374a hsa-miR-30a hsa-miR-186 hsa-miR-642b
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    Inhib. RNA
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    Additional cDNA sequence: 

    AF022385.1 AK291130.1 BC002506.1 BC016353.1 CR457107.1 

    17 DOTS entries:

    DT.92446702  DT.311371  DT.100886934  DT.91729418  DT.40110826  DT.100886933  DT.92446708  DT.91640498 
    DT.91651122  DT.97814093  DT.100886931  DT.120869271  DT.120869312  DT.92338755  DT.92446710  DT.92446712 
    DT.97777196 

    24/332 AceView cDNA sequences (see all 332):

    AW383024 AA195035 AI253079 BI260338 AA599041 AA195200 BU948431 BQ643761 
    BM843544 BQ428381 CR597382 BU677227 BQ018007 AI261276 CK823226 NM_007217 
    BE672189 AW383044 BQ650198 BM843416 NM_145860 BM804624 AI352636 CA425437 

    GeneLoc Exon Structure

    5/11 Alternative Splicing Database (ASD) splice patterns (SP) for PDCD10 (see all 11)    About this scheme

    ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b ^ 7a · 7b ^ 8 ^ 9a · 9b · 9c ^ 10 ^ 11 ^ 12 ^ 13a · 13b · 13c
    SP1:                          -     -     -     -                             -     -     -                                                   
    SP2:                                -     -           -                       -     -     -                                                   
    SP3:                          -     -     -     -     -                       -     -     -                                                   
    SP4:                          -     -     -           -                       -     -     -                                                   
    SP5:                                            -     -                       -     -     -                                                   


    ECgene alternative splicing isoforms for PDCD10

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    PDCD10 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TATCCTGTGT
    PDCD10 Expression
    About this image
    See PDCD10 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for PDCD10

    SOURCE GeneReport for Unigene cluster: Hs.478150

    UniProtKB/Swiss-Prot: PDC10_HUMAN, Q9BUL8
    Tissue specificity: Ubiquitous

        SABiosciences Custom PCR Arrays for PDCD10
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PDCD10

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for PDCD10 gene from 7/24 species (see all 24)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Pdcd101 , 5 programmed cell death 101, 5 94.81(n)1
    99.53(a)1
      3 (33.76 cM)5
    564261  NM_019745.31  NP_062719.21 
     755164905 
    chicken
    (Gallus gallus)
    Aves PDCD101 programmed cell death 10 90.72(n)
    99.06(a)
      425003  NM_001006554.1  NP_001006554.1 
    lizard
    (Anolis carolinensis)
    Reptilia PDCD106
    --
    100(a)
    1 ↔ 1
    3(9311794-9335720)
    African clawed frog
    (Xenopus laevis)
    Amphibia pdcd10-prov2 programmed cell death 10 87.1(n)    BC041501.1 
    zebrafish
    (Danio rerio)
    Actinopterygii BC056552.12   -- 80.84(n)   393527  BC056552.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG50731 , 3 CG50731 48(a)3
    54.93(n)1
    50.51(a)1
      418761  NM_142202.21  NP_650459.11 
    worm
    (Caenorhabditis elegans)
    Secernentea C14A4.111 Protein C14A4.11 51.59(n)
    40.48(a)
      174638  NM_063889.4  NP_496290.2 


    ENSEMBL Gene Tree for PDCD10 (if available)
    TreeFam Gene Tree for PDCD10 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for PDCD10 gene

    PDCD10 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for PDCD10
    PGOHUM00000249655


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/747 NCBI SNPs in PDCD10 are shown (see all 747    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 3 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs749005521,2
    F--164771288(+) ATATAA/GTATTA 3 -- ds50011Minor allele frequency- G:0.05NA 120
    rs2019230931,2
    C--164771362(-) TTTCCA/CAAAAA 3 -- ds50010--------
    rs778988391,2
    C,F--164771401(+) TATACG/AAAAGG 3 -- ds50011Minor allele frequency- A:0.02EA 120
    rs126337151,2
    H--164772264(+) TAAAAA/GGAAAA 3 -- int1 trp33Minor allele frequency- G:0.00EA NS 292
    rs126391611,2
    C,H--164772265(+) AAAAAG/AAAAAG 3 -- int1 trp31Minor allele frequency- A:0.00NA 2
    rs787828771,2
    F--164772312(+) TAAGAT/CTTATA 3 -- int11Minor allele frequency- C:0.03NA 120
    rs67996361,2
    C,H--164772942(+) GTATCA/GTATCT 3 -- int13Minor allele frequency- G:0.06EA NS WA 296
    rs98108841,2
    C,F,A,H--164773213(+) aggtcG/Acagtg 3 -- int18Minor allele frequency- A:0.17EA NS NA WA 544
    rs343247991,2
    --164773327(+) TCCATG/CCCCCT 3 -- int11Minor allele frequency- C:0.50NA 2
    rs766543761,2
    C,F--164773713(+) GAGCAT/CTTCCC 3 -- int11Minor allele frequency- C:0.06EA 120

    HapMap Linkage Disequilibrium report for PDCD10 (167401086 - 167452727 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for PDCD10: --
    Human Gene Mutation Database (HGMD): PDCD10

    SABiosciences Cancer Mutation PCR Assays
    1 SABiosciences qBiomarker Copy Number PCR Array containing PDCD10:
    Ovarian Cancer
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing PDCD10
    DNA2.0 Custom Variant and Variant Library Synthesis for PDCD10

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    PDCD10 for disorders           About GeneDecksing

    OMIM gene information: 609118   
    OMIM disorders: 603285  
    UniProtKB/Swiss-Prot: PDC10_HUMAN, Q9BUL8
  • Defects in PDCD10 are the cause of cerebral cavernous malformations type 3 (CCM3) [MIM:603285]. Cerebral
  • cavernous malformations (CCMs) are congenital vascular anomalies of the central nervous system that can result in
    hemorrhagic stroke, seizures, recurrent headaches, and focal neurologic deficits. CCMs have an incidence of 0.1%-0.5%
    in the general population and usually present clinically during the 3rd to 5th decade of life. The lesions are
    characterized by grossly enlarged blood vessels consisting of a single layer of endothelium and without any
    intervening neural tissue, ranging in diameter from a few millimeters to several centimeters

    18 diseases for PDCD10:    About MalaCards
    cerebral cavernous malformations    cavernous malformation    cerebral cavernous malformations 3    cerebritis
    klippel-trenaunay syndrome    seizures    cerebral hemorrhage    vascular malformations
    cerebrovascular accident    venous malformations    proteus syndrome    headache
    brain disease    hematopoiesis    meningioma    retinitis
    leukemia    neuronitis

    1 disease from the University of Copenhagen DISEASES database for PDCD10:
    Klippel-Trenaunay syndrome

    4 Novoseek disease relationships for PDCD10 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    cerebral cavernous malformations 98.4 19 16284570 (2), 18496199 (2), 17657516 (2), 19151727 (1) (see all 11)
    vascular anomaly 72 1 15905966 (1)
    malformation venous 70.2 1 16379592 (1)
    klippel-trenaunay syndrome 65.4 1 16379592 (1)

    GeneTests: PDCD10
    Familial Cerebral Cavernous Malformation

    Human Genome Epidemiology (HuGE) Navigator: PDCD10 (5 documents)

    Export disorders for PDCD10 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for PDCD10 gene, integrated from 9 sources (see all 76):
    (articles sorted by number of sources associating them with PDCD10)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Mutations within the programmed cell death 10 gene cause cerebral cavernous malformations. (PubMed id 15543491)1, 2, 3, 9 Bergametti F....Tournier-Lasserve E. (2005)
    2. Functional analyses of human and zebrafish 18-amino a cid in-frame deletion pave the way for domain mapping of the cerebral cavernous malformation 3 protein. (PubMed id 19370760)1, 2, 9 Voss K....Felbor U. (2009)
    3. CCM3/PDCD10 stabilizes GCKIII proteins to promote Gol gi assembly and cell orientation. (PubMed id 20332113)1, 2 Fidalgo M....Zalvide J. (2010)
    4. Crystal structure of CCM3, a cerebral cavernous malformation protein critical for vascular integrity. (PubMed id 20489202)1, 2 Li X.... Boggon T.J. (2010)
    5. PDCD10 interacts with Ste20-related kinase MST4 to promote cell growth and transformation via modulation of the ERK pathway. (PubMed id 17360971)1, 2 Ma X....Ma D. (2007)
    6. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    7. Mutations in apoptosis-related gene, PDCD10, cause cerebral cavernous malformation 3. (PubMed id 16284570)1, 9 Guclu B....Gunel M. (2005)
    8. CCM3 interacts with CCM2 indicating common pathogenesis for cerebral cavernous malformations. (PubMed id 17657516)1, 9 Voss K....Felbor U. (2007)
    9. Low frequency of PDCD10 mutations in a panel of CCM3 probands: potential for a fourth CCM locus. (PubMed id 16329096)1, 9 Liquori C.L....Marchuk D.A. (2006)
    10. Identification of an Arg35X mutation in the PDCD10 gene in a patient with cerebral and multiple spinal cavernous malformations. (PubMed id 18035376)1, 9 Lee S.T....Cho Y.D. (2008)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 11235 HGNC: 8761 AceView: PDCD10 Ensembl:ENSG00000114209 euGenes: HUgn11235
    ECgene: PDCD10 H-InvDB: PDCD10

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for PDCD10 Pharmacogenomics, SNPs, Pathways
    GeneReviewshttp://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/PDCD10

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for PDCD10 gene:
    Search GeneIP for patents involving PDCD10

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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