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Aliases for PCAT6 Gene

Subcategory (RNA class) for PCAT6 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for PCAT6 Gene

  • Prostate Cancer Associated Transcript 6 (Non-Protein Coding) 2 3
  • Prostate Cancer-Associated Noncoding RNA 1 2 3
  • KDM5B Antisense RNA 1 (Head To Head) 2 3
  • KDM5B Antisense RNA 1 (Non-Protein Coding) 3
  • Noncoding RNA-Activating 2 3
  • KDM5B-AS1 3
  • KDM5BAS1 3
  • NcRNA-A2 3
  • PCAN-R1 3

External Ids for PCAT6 Gene

ORGUL Members for PCAT6 Gene

Previous HGNC Symbols for PCAT6 Gene

  • KDM5B-AS1

Summaries for PCAT6 Gene

GeneCards Summary for PCAT6 Gene

PCAT6 (Prostate Cancer Associated Transcript 6 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with PCAT6 include prostate cancer.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PCAT6 Gene

Genomics for PCAT6 Gene

Genomic Location for PCAT6 Gene

Start:
202,810,946 bp from pter
End:
202,812,156 bp from pter
Size:
1,211 bases
Orientation:
Plus strand

Genomic View for PCAT6 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for PCAT6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PCAT6 Gene

No data available for Regulatory Elements for PCAT6 Gene

Proteins for PCAT6 Gene

Post-translational modifications for PCAT6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PCAT6 Gene

Domains for PCAT6 Gene

Gene Families for PCAT6 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with PCAT6: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PCAT6 Gene

Function for PCAT6 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for PCAT6 Gene

Localization for PCAT6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PCAT6 Gene

Pathways for PCAT6 Gene

SuperPathways for PCAT6 Gene

No Data Available

Interacting Proteins for PCAT6 Gene

Gene Ontology (GO) - Biological Process for PCAT6 Gene

None

No data available for Pathways by source for PCAT6 Gene

Transcripts for PCAT6 Gene

mRNA/cDNA for PCAT6 Gene

(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PCAT6 Gene

No ASD Table

Relevant External Links for PCAT6 Gene

GeneLoc Exon Structure for
PCAT6
ECgene alternative splicing isoforms for
PCAT6

Expression for PCAT6 Gene

mRNA expression in normal human tissues for PCAT6 Gene

mRNA differential expression in normal tissues according to GTEx for PCAT6 Gene

This gene is overexpressed in Testis (17.1).
genes like me logo Genes that share expressions with PCAT6: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for PCAT6 Gene

Orthologs for PCAT6 Gene

Evolution for PCAT6 Gene

ENSEMBL:
Gene Tree for PCAT6 (if available)
TreeFam:
Gene Tree for PCAT6 (if available)

No data available for Orthologs for PCAT6 Gene

Paralogs for PCAT6 Gene

No data available for Paralogs for PCAT6 Gene

Variants for PCAT6 Gene

Relevant External Links for PCAT6 Gene

HapMap Linkage Disequilibrium report
PCAT6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for PCAT6 Gene

Disorders for PCAT6 Gene

MalaCards: The human disease database

MalaCards: The human disease database. (1) Diseases for PCAT6 Gene including...

Search for PCAT6 Gene in MalaCards »
genes like me logo Genes that share disorders with PCAT6: view

No data available for UniProtKB/Swiss-Prot for PCAT6 Gene

Publications for PCAT6 Gene

  1. Long noncoding RNAs with enhancer-like function in human cells. (PMID: 20887892) A9rom U.A. … Shiekhattar R. (Cell 2010) 2 3
  2. Integrative genomic analyses reveal clinically relevant long noncoding RNAs in human cancer. (PMID: 23728290) Du Z. … Liu X.S. (Nat. Struct. Mol. Biol. 2013) 2 3

Products for PCAT6 Gene

Sources for PCAT6 Gene

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