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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

PBX2 Gene

protein-coding   GIFtS: 53
GCID: GC06M032151

pre-B-cell leukemia homeobox 2

(Previous name: pre-B-cell leukemia transcription factor 2 )
 Explore 14 diseases affiliated with
PBX2 via our new
 Human Malady Compendium 
Biological research products
for PBX2
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Pre-B-Cell Leukemia Homeobox 21 2     Pre-B-Cell Leukemia Transcription Factor 21 2
G171 2 3 5     Homeobox Protein PBX22 3
HOX121 2 5     Homeobox 122
PBX2MHC1 2     Protein G173

External Ids:    HGNC: 86331   Entrez Gene: 50892   Ensembl: ENSG000002043047   OMIM: 1763115   UniProtKB: P404253   

Export aliases for PBX2 gene to outside databases

Previous GC identifers: GC06M032179 GC06M031923 GC06M032223 GC06M032260 GC06M031907


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for PBX2:
This gene encodes a ubiquitously expressed member of the TALE/PBX homeobox family. It was identified by its similarity
to a homeobox gene which is involved in t(1;19) translocation in acute pre-B-cell leukemias. This protein is a
transcriptional activator which binds to the TLX1 promoter. The gene is located within the major histocompatibility
complex (MHC) on chromosome 6. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: PBX2_HUMAN, P40425
Function: Transcriptional activator that binds the sequence 5'-ATCAATCAA-3'. Activates transcription of PF4 in complex
with MEIS1

Gene Wiki entry for PBX2


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000006.11  NC_018917.1  NT_007592.15  NT_113891.2  NT_167244.1  NT_167246.1  NT_167247.1  NT_167248.1  
NT_167249.1  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the PBX2 gene promoter:
         CREB   HEN1   Pax-5   deltaCREB   STAT3   ITF-2   Tal-1beta   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidPBX2 promoter sequence
   Search SABiosciences Chromatin IP Primers for PBX2

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat PBX2


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 6p21.3   Ensembl cytogenetic band:  6p21.32   HGNC cytogenetic band: 6p21.32

PBX2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
PBX2 gene location

GeneLoc information about chromosome 6         GeneLoc Exon Structure

GeneLoc location for GC06M032151:  view genomic region     (about GC identifiers)

Start:
32,151,966 bp from pter      End:
32,157,963 bp from pter
Size:
5,998 bases      Orientation:
minus strand

6 alternative locations:
Chr6-,ALT_REF_LOCI_4 32,114,993-32,120,443      Chr6-,ALT_REF_LOCI_1 32,163,854-32,177,604      Chr6-,ALT_REF_LOCI_2 32,100,987-32,145,625     
Chr6-,ALT_REF_LOCI_6 32,110,133-32,151,165      Chr6-,ALT_REF_LOCI_5 32,143,760-32,149,210      Chr6-,ALT_REF_LOCI_7 32,089,703-32,095,154     

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: PBX2_HUMAN, P40425 (See protein sequence)
Recommended Name: Pre-B-cell leukemia transcription factor 2  
Size: 430 amino acids; 45881 Da
Subunit: Forms heterodimers with MEIS1 and heterotrimers with MEIS1 and HOXA9. Interacts with PBXIP1
Subcellular location: Nucleus (Probable)
Secondary accessions: A2BFJ2

Explore the universe of human proteins at neXtProt for PBX2: NX_P40425

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P40425

  • PBX2 Protein expression data from MOPED and PaxDb:    About this image 
    PBX2 Protein Expression
    REFSEQ proteins: NP_002577.2  
    ENSEMBL proteins: 
     ENSP00000364190  

    Human Recombinant Protein Products for PBX2: 
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    Novus Biologicals PBX2 Proteins
    Novus Biologicals PBX2 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for PBX2

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IDA18973687
    GO:0005667transcription factor complex IEA--

    PBX2 for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for PBX2


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    PBX2 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR005542 PBX
     IPR017970 Homeobox_CS
     IPR001356 Homeodomain
     IPR009057 Homeodomain-like

    Graphical View of Domain Structure for InterPro Entry P40425

    ProtoNet protein and cluster: P40425

    2 Blocks protein families:
    IPB000047 Lambda and other repressor helix-turn-helix signature
    IPB005542 PBX domain


    UniProtKB/Swiss-Prot: PBX2_HUMAN, P40425
    Similarity: Belongs to the TALE/PBX homeobox family
    Similarity: Contains 1 homeobox DNA-binding domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: PBX2_HUMAN, P40425
    Function: Transcriptional activator that binds the sequence 5'-ATCAATCAA-3'. Activates transcription of PF4 in complex
    with MEIS1

         Genatlas biochemistry entry for PBX2:
    transcription factor,with a homeo domain,homologous to PBX1,expressed in most tissues,fetal and adult,binding DNA
    cooperatively with the heterodimer E2A/myogenic transcription factors

         Gene Ontology (GO): 5 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003682chromatin binding IEA--
    GO:0003700sequence-specific DNA binding transcription factor activity IEA--
    GO:0005515protein binding ----
    GO:0008134transcription factor binding IPI18973687
    GO:0043565sequence-specific DNA binding IEA--
         
    PBX2 for ontologies           About GeneDecksing


    Phenotypes:
         11 MGI mutant phenotypes (inferred from 1 allele(MGI details for Pbx2):
     cellular  craniofacial  digestive/alimentary  hematopoietic system  homeostasis/metabolism 
     immune system  mortality/aging  nervous system  normal  respiratory system 
     skeleton 

    PBX2 for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-out Pbx2tm1Mlc for PBX2
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for PBX2 

    miRNA
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    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat PBX2
    8/76 QIAGEN miScript miRNA Assays for microRNAs that regulate PBX2 (see all 76):
    hsa-miR-548j hsa-miR-1914* hsa-miR-146a hsa-miR-10b* hsa-miR-1244 hsa-miR-3150b-3p hsa-miR-548a-5p hsa-miR-3148
    SwitchGear 3'UTR luciferase reporter plasmidPBX2 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for PBX2 (see all 7)
    OriGene shRNA RFP: PBX2
    OriGene siRNA: PBX2
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    Sirion Biotech Custom design and validation of potent shRNA sequences against PBX2 

    Gene Editing
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    Sirion Biotech Customized adenovirus for overexpression of PBX2 
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    Clone
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PBX2 

    Cell Line
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    Sirion Biotech Customized inducible overexpressing cell line services for PBX2

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PBX2


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PBX2

    STRING Interaction Network Preview (showing 5 interactants - click image to see 20)

    5/32 Interacting proteins for PBX2 (P404252, 3 ENSP000003641904) via UniProtKB, MINT, STRING, and/or I2D (see all 32)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    DCTN3O759352, 3, ENSP000002596324MINT-62576 MINT-62674 MINT-62750 I2D: score=4 STRING: ENSP00000259632
    MCRS1Q96EZ82, 3, ENSP000003496404MINT-62569 MINT-62667 MINT-62743 I2D: score=4 STRING: ENSP00000349640
    MLKLQ8NB162, 3MINT-62574 MINT-62748 MINT-62672 I2D: score=2 
    SMYD3Q9H7B42, 3, ENSP000003736374MINT-62527 I2D: score=4 STRING: ENSP00000373637
    BAIAP2Q9UQB82, 3, ENSP000003163384MINT-62572 MINT-62670 MINT-62746 I2D: score=4 STRING: ENSP00000316338
    About this table

    Gene Ontology (GO): 4 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006351transcription, DNA-dependent IEA--
    GO:0009954proximal/distal pattern formation IEA--
    GO:0030326embryonic limb morphogenesis IEA--
    GO:0045944positive regulation of transcription from RNA polymerase II promoter IEA--

    PBX2 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for PBX2
    Search CenterWatch for drugs/clinical trials and news about PBX2 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for PBX2 gene: 
    NM_002586.4  

    Unigene Cluster for PBX2:

    Pre-B-cell leukemia homeobox 2
    Hs.509545  [show with all ESTs]
    Unigene Representative Sequence: X59842
    5 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000375050(uc003oav.1) ENST00000495300 ENST00000478678(uc003oaw.3)
    ENST00000496171 ENST00000480254

    miRNA
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    OriGene 3'-UTR Clone: PBX2
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat PBX2
    8/76 QIAGEN miScript miRNA Assays for microRNAs that regulate PBX2 (see all 76):
    hsa-miR-548j hsa-miR-1914* hsa-miR-146a hsa-miR-10b* hsa-miR-1244 hsa-miR-3150b-3p hsa-miR-548a-5p hsa-miR-3148
    SwitchGear 3'UTR luciferase reporter plasmidPBX2 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for PBX2 (see all 7)
    OriGene shRNA RFP: PBX2
    OriGene siRNA: PBX2
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat PBX2
    Sirion Biotech Custom design and validation of potent shRNA sequences against PBX2 
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for PBX2 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for PBX2
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript Custom all cDNA clones Services for PBX2
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat PBX2 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for PBX2
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat PBX2
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat PBX2
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat PBX2

    Additional cDNA sequence: 

    BC082261.1 BT009823.1 X59842.1 

    18 DOTS entries:

    DT.100781048  DT.121378260  DT.445917  DT.100027239  DT.100781053  DT.100699252  DT.86814814  DT.121378333 
    DT.95202672  DT.121378477  DT.121378356  DT.100735855  DT.100772866  DT.102839412  DT.121378335  DT.91780433 
    DT.91942501  DT.99962343 

    24/307 AceView cDNA sequences (see all 307):

    BU521990 AI057090 BM714937 BU188403 BU899237 CD722009 CA428962 BC082261 
    BQ023810 AW177610 CD251257 AB036432 BQ690225 BF476466 BU622208 AW150393 
    CD722431 BM726610 BM894006 BM702297 BC003111 AI620218 AB061668 NM_002586 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    PBX2 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GGCCGGGGGC
    PBX2 Expression
    About this image

    PBX2 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    8 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    LimbLimb BudLimb Bud Mesenchyme CellsMesoderm
    BoneAutopod Epiphyseal EndChondrocytesBone, Cartilage
    BoneStylopod Epiphyseal EndChondrocytesBone, Cartilage
    BoneZeugopod Epiphyseal EndChondrocytesBone, Cartilage
    Lateral Plate MesodermLateral Plate MesodermLateral Plate Mesoderm CellsMesoderm
    LimbAutopodMesenchymal Condensate CellsBone, Cartilage
    LimbStylopodMesenchymal Condensate CellsBone, Cartilage
    LimbZeugopodMesenchymal Condensate CellsBone, Cartilage
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See PBX2 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for PBX2

    SOURCE GeneReport for Unigene cluster: Hs.509545

    UniProtKB/Swiss-Prot: PBX2_HUMAN, P40425
    Tissue specificity: Ubiquitously expressed

        SABiosciences Custom PCR Arrays for PBX2
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for PBX2

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for PBX2 gene from 5/18 species (see all 18)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    lizard
    (Anolis carolinensis)
    Reptilia PBX26
    --
    81(a)
    1 ↔ 1
    2(198449536-198497758)
    tropical clawed frog
    (Xenopus tropicalis)
    Amphibia Str.64542 Transcribed sequence with moderate similarity to protein more 80.03(n)    BX733561.1 
    zebrafish
    (Danio rerio)
    Actinopterygii pbx26
    CU467620.16
    --
    67(a)
    53(a)
    1 ↔ 1
    possible ortholog
    16(51950122-51977259)
    2(19615653-19618709)
    fruit fly
    (Drosophila melanogaster)
    Insecta exd3 brain development specific RNA polymerase II
    transcription more
    80(a)   14A5   --
    worm
    (Caenorhabditis elegans)
    Secernentea ceh-203   -- 57(a)
    (best of 2)
      III(7051642-7053281)   --


    ENSEMBL Gene Tree for PBX2 (if available)
    TreeFam Gene Tree for PBX2 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for PBX2 gene
    PBX32  PBX42  PBX12  
    9 SIMAP similar genes for PBX2 using alignment to 5 protein entries:     PBX2_HUMAN (see all proteins):
    E2A/PBX1 fusion    PBX1    PBX3    DKFZp686B09108    PBX4    PKNOX1
    TGIF1    POU6F1    WUGSC

    PBX2 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/97 NCBI SNPs in PBX2 are shown (see all 97    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 6 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs20781671,2
    C--32154128(-) GGGGGC/GTCTCA 1 -- ut31 ese30--------
    rs1491454421,2
    F--32154210(+) GATGTC/TACTGA 2 V syn11Minor allele frequency- T:0.00NA 4540
    rs2049951,2
    C,F,H--32154285(-) GGGCTT/CTCTCT 1 -- int132Minor allele frequency- C:0.28EA NA MN NS WA CSA 3301
    rs1421330221,2
    --32154314(+) ACAACA/GTTACT 1 -- int10--------
    rs1432203451,2
    C,F--32154416(+) TCCCCC/TGAGGT 2 R G mis12Minor allele frequency- T:0.00NA EU 5859
    rs1809465411,2
    C--32154448(+) CCATCA/GAGTGT 2 S L mis10--------
    rs2007894141,2
    --32154506(+) AGAAGA/CCTCAG 1 -- int10--------
    rs1140250841,2
    C,F--32154569(+) TATTCG/CAGAGG 1 -- int12Minor allele frequency- C:0.01NA EU 713
    rs1385071941,2
    C--32154639(+) GAAACA/GTGTCT 2 T M mis11Minor allele frequency- G:0.00NA 4552
    rs1999457901,2
    --32154684(+) CTTGTC/GGGGGC 1 -- int10--------

    HapMap Linkage Disequilibrium report for PBX2 (32151966 - 32157963 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for PBX2
         1 CNV: 3602

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing PBX2
    DNA2.0 Custom Variant and Variant Library Synthesis for PBX2

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    PBX2 for disorders           About GeneDecksing

    OMIM gene information: 176311    OMIM disorders: --

    14 diseases for PBX2:    About MalaCards
    t-cell leukemia    leukemia    non-small cell lung carcinoma    esophageal squamous cell carcinoma
    systemic lupus erythematosus    squamous cell carcinoma    lupus erythematosus    ulcerative colitis
    teratocarcinoma    lung carcinoma    gastric adenocarcinoma    esophagitis
    carcinoma    adenocarcinoma

    1 Novoseek disease relationship for PBX2 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    leukemia pre-b-cell 95.3 3 1682799 (1), 7759099 (1)

    Human Genome Epidemiology (HuGE) Navigator: PBX2 (9 documents)

    Export disorders for PBX2 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for PBX2 gene, integrated from 9 sources (see all 39):
    (articles sorted by number of sources associating them with PBX2)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Three genes in the human MHC class III region near the junction with the class II: gene for receptor of advanced glycosylation end products, PBX2 homeobox gene and a notch homolog, human counterpart of mouse mammary tumor gene int-3. (PubMed id 7835890)1, 2, 3, 9 Sugaya K.... Ikemura T. (1994)
    2. The novel gene G17, located in the human major histocompatibility complex, encodes PBX2, a homeodomain-containing protein. (PubMed id 7759099)1, 2, 9 Aguado B. and Campbell R.D. (1995)
    3. PBX2 and PBX3, new homeobox genes with extensive homology to the human proto-oncogene PBX1. (PubMed id 1682799)1, 2, 9 Monica K.... Cleary M.L. (1991)
    4. Homeodomain proteins MEIS1 and PBXs regulate the lineage-specific transcription of the platelet factor 4 gene. (PubMed id 12609849)1, 2, 9 Okada Y....Doi T. (2003)
    5. Fusion with E2A converts the Pbx1 homeodomain protein into a constitutive transcriptional activator in human leukemias carrying the t(1;19) translocation. (PubMed id 7910944)1, 2, 9 Lu Q.... Kamps M.P. (1994)
    6. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    7. The DNA sequence and analysis of human chromosome 6. (PubMed id 14574404)1, 2 Mungall A.J.... Beck S. (2003)
    8. Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse. (PubMed id 14656967)1, 2 Xie T.... Hood L. (2003)
    9. Overexpression of PREP-1 in F9 teratocarcinoma cells leads to a functionally relevant increase of PBX-2 by preventing its degradation. (PubMed id 12871956)1, 9 Longobardi E. and Blasi F. (2003)
    10. Expression level of pre-B-cell leukemia transcription factor 2 (PBX2) as a prognostic marker for gingival squamous cell carcinoma. (PubMed id 22374608)1 Qiu Y....Morii E. (2012)

    (in PubMed, OMIM, and NCBI Bookshelf)
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    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 5089 HGNC: 8633 AceView: AGERandPBX2 Ensembl:ENSG00000204304 euGenes: HUgn5089
    ECgene: PBX2 H-InvDB: PBX2

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for PBX2 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for PBX2 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for PBX2 gene:
    Search GeneIP for patents involving PBX2

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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