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Aliases for PBDC1 Gene

Aliases for PBDC1 Gene

  • Polysaccharide Biosynthesis Domain Containing 1 2 3
  • Polysaccharide Biosynthesis Domain-Containing Protein 1 3 4
  • CXorf26 3 4
  • Chromosome X Open Reading Frame 26 2
  • UPF0368 Protein Cxorf26 3
  • Protein PBDC1 3
  • 2610029G23Rik 3

External Ids for PBDC1 Gene

Previous HGNC Symbols for PBDC1 Gene

  • CXorf26

Previous GeneCards Identifiers for PBDC1 Gene

  • GC0XP075398
  • GC0XP075403
  • GC0XP075409

Summaries for PBDC1 Gene

GeneCards Summary for PBDC1 Gene

PBDC1 (Polysaccharide Biosynthesis Domain Containing 1) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PBDC1 Gene

Genomics for PBDC1 Gene

Genomic Location for PBDC1 Gene

76,172,936 bp from pter
76,178,314 bp from pter
5,379 bases
Plus strand

Genomic View for PBDC1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for PBDC1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PBDC1 Gene

No data available for Regulatory Elements for PBDC1 Gene

Proteins for PBDC1 Gene

  • Protein details for PBDC1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Protein PBDC1
    Protein Accession:
    Secondary Accessions:

    Protein attributes for PBDC1 Gene

    233 amino acids
    Molecular mass:
    26057 Da
    Quaternary structure:
    No Data Available

neXtProt entry for PBDC1 Gene

Proteomics data for PBDC1 Gene at MOPED

Post-translational modifications for PBDC1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for PBDC1 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for PBDC1 Gene

Domains for PBDC1 Gene

Protein Domains for PBDC1 Gene

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the PBDC1 family.
  • Belongs to the PBDC1 family.
genes like me logo Genes that share domains with PBDC1: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for PBDC1 Gene

Function for PBDC1 Gene

Gene Ontology (GO) - Molecular Function for PBDC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
genes like me logo Genes that share ontologies with PBDC1: view

miRNA for PBDC1 Gene

miRTarBase miRNAs that target PBDC1

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for PBDC1

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for PBDC1 Gene

Localization for PBDC1 Gene

Gene Ontology (GO) - Cellular Components for PBDC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005575 cellular_component ND --
genes like me logo Genes that share ontologies with PBDC1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for PBDC1 Gene

Pathways for PBDC1 Gene

SuperPathways for PBDC1 Gene

No Data Available

Interacting Proteins for PBDC1 Gene

Gene Ontology (GO) - Biological Process for PBDC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with PBDC1: view

No data available for Pathways by source for PBDC1 Gene

Transcripts for PBDC1 Gene

mRNA/cDNA for PBDC1 Gene

Unigene Clusters for PBDC1 Gene

Polysaccharide biosynthesis domain containing 1:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for PBDC1

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for PBDC1 Gene

ExUns: 1a · 1b · 1c · 1d · 1e ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b ^ 6
SP1: - -
SP2: - - - -
SP3: -
SP4: -

Relevant External Links for PBDC1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for PBDC1 Gene

mRNA expression in normal human tissues for PBDC1 Gene

Protein differential expression in normal tissues for PBDC1 Gene

This gene is overexpressed in Peripheral blood mononuclear cells (6.4).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for PBDC1 Gene

SOURCE GeneReport for Unigene cluster for PBDC1 Gene Hs.370100

genes like me logo Genes that share expressions with PBDC1: view

Expression partners for PBDC1 Gene

* - Elite partner

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for PBDC1 Gene

Orthologs for PBDC1 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for PBDC1 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia PBDC1 35
  • 87.43 (n)
  • 85.34 (a)
PBDC1 36
  • 81 (a)
(Canis familiaris)
Mammalia PBDC1 35
  • 89.12 (n)
  • 87.89 (a)
-- 36
  • 81 (a)
-- 36
  • 84 (a)
(Mus musculus)
Mammalia Pbdc1 35
  • 85.3 (n)
  • 85.13 (a)
Pbdc1 16
Pbdc1 36
  • 81 (a)
(Pan troglodytes)
Mammalia LOC473674 35
  • 99.51 (n)
  • 100 (a)
CXORF26 36
  • 100 (a)
(Rattus norvegicus)
Mammalia Pbdc1 35
  • 87.18 (n)
  • 88.21 (a)
(Monodelphis domestica)
Mammalia PBDC1 36
  • 85 (a)
(Ornithorhynchus anatinus)
Mammalia PBDC1 36
  • 73 (a)
(Gallus gallus)
Aves PBDC1 36
  • 76 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia pbdc1 35
  • 66.44 (n)
  • 70.27 (a)
Str.10635 35
African clawed frog
(Xenopus laevis)
Amphibia Xl.22768 35
(Danio rerio)
Actinopterygii pbdc1 35
  • 68.52 (n)
  • 70.83 (a)
pbdc1 36
  • 60 (a)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.9565 35
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP007575 35
  • 52 (n)
  • 47.33 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG7519 35
  • 54.25 (n)
  • 51.72 (a)
CG7519 36
  • 48 (a)
(Caenorhabditis elegans)
Secernentea Y54E5A.5 35
  • 51.54 (n)
  • 45.38 (a)
Y54E5A.5 36
  • 40 (a)
A. gosspyii yeast
(Ashbya gossypii)
Saccharomycetes AGOS_AFL129W 35
  • 50.13 (n)
  • 45.86 (a)
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0C16159g 35
  • 51.38 (n)
  • 46.62 (a)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes YPL225W 35
  • 51.23 (n)
  • 44.85 (a)
-- 36
  • 42 (a)
-- 38
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.1022 35
bread mold
(Neurospora crassa)
Ascomycetes NCU09442 35
  • 49.75 (n)
  • 40.3 (a)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes SPBC3E7.07c 35
  • 50.12 (n)
  • 40 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 48 (a)
Species with no ortholog for PBDC1:
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for PBDC1 Gene

Gene Tree for PBDC1 (if available)
Gene Tree for PBDC1 (if available)

Paralogs for PBDC1 Gene

No data available for Paralogs for PBDC1 Gene

Variants for PBDC1 Gene

Sequence variations from dbSNP and Humsavar for PBDC1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs15020 -- 76,178,121(-) GGAAA(A/T)ATCAA utr-variant-3-prime
rs1024502 -- 76,172,309(-) AATTT(C/G)AGGAA upstream-variant-2KB
rs2301862 -- 76,175,352(-) GTGTC(A/C/G/T)ACAGT intron-variant
rs2301863 -- 76,175,337(-) ATCCT(A/G)GATGA intron-variant
rs2301864 -- 76,174,878(-) AGGAG(C/T)GAAGA intron-variant

Relevant External Links for PBDC1 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for PBDC1 Gene

Disorders for PBDC1 Gene

No disorders were found for PBDC1 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for PBDC1 Gene

Publications for PBDC1 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  2. Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells. (PMID: 11042152) Zhang Q.-H. … Chen Z. (Genome Res. 2000) 2 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  4. Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution. (PMID: 15790807) Cheng J. … Gingeras T.R. (Science 2005) 3
  5. A human protein-protein interaction network: a resource for annotating the proteome. (PMID: 16169070) Stelzl U. … Wanker E.E. (Cell 2005) 3

Products for PBDC1 Gene

Sources for PBDC1 Gene

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