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Aliases for PABPC1P2 Gene

Aliases for PABPC1P2 Gene

  • Poly(A) Binding Protein, Cytoplasmic 1 Pseudogene 2 2 3
  • Poly(A) Binding Protein, Cytoplasmic, Pseudogene 4 2 3
  • Poly(A) Binding Protein, Cytoplasmic, Pseudogene 2 2 3
  • Poly(A)-Binding Protein, Cytoplasmic, Pseudogene 2 2
  • Poly(A)-Binding Protein, Cytoplasmic, Pseudogene 4 2
  • PABPCP2 3
  • PABPCP4 3
  • PABP2 3
  • PABP4 3

External Ids for PABPC1P2 Gene

Previous HGNC Symbols for PABPC1P2 Gene

  • PABPCP4
  • PABPCP2

Previous GeneCards Identifiers for PABPC1P2 Gene

  • GC02P147344
  • GC02P139340

Summaries for PABPC1P2 Gene

GeneCards Summary for PABPC1P2 Gene

PABPC1P2 (Poly(A) Binding Protein, Cytoplasmic 1 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PABPC1P2 Gene

Genomics for PABPC1P2 Gene

Genomic Location for PABPC1P2 Gene

Chromosome:
2
Start:
146,587,057 bp from pter
End:
146,590,990 bp from pter
Size:
3,934 bases
Orientation:
Plus strand

Genomic View for PABPC1P2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for PABPC1P2 Gene

No data available for Regulatory Elements for PABPC1P2 Gene

Proteins for PABPC1P2 Gene

Post-translational modifications for PABPC1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PABPC1P2 Gene

Domains & Families for PABPC1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PABPC1P2 Gene

Function for PABPC1P2 Gene

Phenotypes for PABPC1P2 Gene

GenomeRNAi human phenotypes for PABPC1P2:
genes like me logo Genes that share phenotypes with PABPC1P2: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PABPC1P2 Gene

Localization for PABPC1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for PABPC1P2 Gene

Pathways & Interactions for PABPC1P2 Gene

SuperPathways for PABPC1P2 Gene

No Data Available

Interacting Proteins for PABPC1P2 Gene

Gene Ontology (GO) - Biological Process for PABPC1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PABPC1P2 Gene

Drugs & Compounds for PABPC1P2 Gene

No Compound Related Data Available

Transcripts for PABPC1P2 Gene

mRNA/cDNA for PABPC1P2 Gene

(5) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for PABPC1P2 Gene

Poly(A) binding protein, cytoplasmic 1 pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for PABPC1P2 Gene

No ASD Table

Relevant External Links for PABPC1P2 Gene

GeneLoc Exon Structure for
PABPC1P2
ECgene alternative splicing isoforms for
PABPC1P2

Expression for PABPC1P2 Gene

mRNA expression in normal human tissues for PABPC1P2 Gene

mRNA differential expression in normal tissues according to GTEx for PABPC1P2 Gene

This gene is overexpressed in Testis (x51.1).

SOURCE GeneReport for Unigene cluster for PABPC1P2 Gene Hs.334462

genes like me logo Genes that share expression patterns with PABPC1P2: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for PABPC1P2 Gene

Orthologs for PABPC1P2 Gene

Evolution for PABPC1P2 Gene

ENSEMBL:
Gene Tree for PABPC1P2 (if available)
TreeFam:
Gene Tree for PABPC1P2 (if available)

No data available for Orthologs for PABPC1P2 Gene

Paralogs for PABPC1P2 Gene

No data available for Paralogs for PABPC1P2 Gene

Variants for PABPC1P2 Gene

Sequence variations from dbSNP and Humsavar for PABPC1P2 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs3814364 -- 146,587,857(-) CAGAA(A/T)ATGCA nc-transcript-variant
rs7561768 -- 146,587,770(+) TCAGC(A/G)CGATC nc-transcript-variant
rs11895630 -- 146,587,452(+) CGCTC(C/T)CCTCC nc-transcript-variant
rs12618196 -- 146,591,096(+) CTTTA(A/G)GTATC downstream-variant-500B
rs12691742 -- 146,586,415(+) TTGTC(A/G)TTTAA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for PABPC1P2 Gene

Variant ID Type Subtype PubMed ID
nsv834403 CNV Gain 17160897

Relevant External Links for PABPC1P2 Gene

HapMap Linkage Disequilibrium report
PABPC1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for PABPC1P2 Gene

Disorders for PABPC1P2 Gene

Relevant External Links for PABPC1P2

Genetic Association Database (GAD)
PABPC1P2
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
PABPC1P2
genes like me logo Genes that share disorders with PABPC1P2: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PABPC1P2 Gene

Publications for PABPC1P2 Gene

  1. Chromosomal localization of three human poly(A)-binding protein genes and four related pseudogenes. (PMID: 10543404) FAcral C. … GuellaAn G. (Hum. Genet. 1999) 2 67
  2. Genome-wide association of lipid-lowering response to statins in combined study populations. (PMID: 20339536) Barber M.J. … Krauss R.M. (PLoS ONE 2010) 67
  3. Common genetic variation and the control of HIV-1 in humans. (PMID: 20041166) Fellay J. … Goldstein D.B. (PLoS Genet. 2009) 67
  4. Genome-wide association study of electrocardiographic and heart rate variability traits: the Framingham Heart Study. (PMID: 17903306) Newton-Cheh C. … Larson M.G. (BMC Med. Genet. 2007) 67
  5. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan R.S. … Benjamin E.J. (BMC Med. Genet. 2007) 67

Products for PABPC1P2 Gene

Sources for PABPC1P2 Gene

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