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Aliases & Descriptions for PA2G4
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| EBP1 2, 3 | | HG4-1 2 | | hG4-1 3 | | p38-2G4 2 |
| | | Descriptions |
|---|
| Cell cycle protein p38-2G4 homolog 2, 3 | | ErbB-3 binding protein 1 2 | | ErbB3-binding protein 1 2, 3 | | ErbB3-binding protein Ebp1 2 | | proliferation-associated 2G4, 38kD 1 | | proliferation-associated 2G4, 38kDa 2 |
|
| | Search outside databases for aliases for PA2G4 genePrevious GC identifers: GC12M056378 GC12M056832 GC12P056215 |
Summaries for PA2G4(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for PA2G4: This gene encodes an RNA-binding protein that is involved in growth regulation. This protein is present in pre-ribosomal ribonucleoprotein complexes and may be involved in ribosome assembly and the regulation of intermediate and late steps of rRNA processing. This protein can interact with the cytoplasmic domain of the ErbB3 receptor and may contribute to transducing growth regulatory signals. This protein is also a transcriptional co-repressor of androgen receptor-regulated genes and other cell cycle regulatory genes through its interactions with histone deacetylases. This protein has been implicated in growth inhibition and the induction of differentiation of human cancer cells. Six pseudogenes, located on chromosomes 3, 6, 9, 18, 20 and X, have been identified. [provided by RefSeq] UniProtKB/Swiss-Prot: PA2G4_HUMAN, Q9UQ80Function: May play a role in a ERBB3-regulated signal transduction pathway. Seems be involved in growth regulation. Acts a corepressor of the androgen receptor (AR) and is regulated by the ERBB3 ligand neuregulin-1/heregulin (HRG). Inhibits transcription of some E2F1-regulated promoters, probably by recruiting histone acetylase (HAT) activity. Binds RNA. Associates with 28S, 18S and 5.8S mature rRNAs, several rRNA precursors and probably U3 small nucleolar RNA. May be involved in regulation of intermediate and late steps of rRNA processing. May be involved in ribosome assembly. Mediates cap-independent translation of specific viral IRESs (internal ribosomal entry site) (By similarity)Gene Wiki entry for PA2G4 |
Genomic Location for PA2G4
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the PA2G4 gene 
Entrez Gene cytogenetic band: 12q13.2 Ensembl cytogenetic band: 12q13.2 HGNC cytogenetic band: 12q13.2PA2G4 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 12 GeneLoc Exon Structure GeneLoc location for GC12P054784:
(about GC identifiers)
Start:
|
54,784,370 bp from pter |
End:
|
54,793,961 bp from pter |
Size:
|
9,592 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000012.10 NT_029419.11
| Proteins for PA2G4
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: PA2G4_HUMAN, Q9UQ80 (See
protein sequence)Recommended Name: Proliferation-associated protein 2G4 Size: 394 amino acids; 43787 Da
Subunit: Interacts with the cytoplasmic domain of non-phosphorylated ERBB3; the interaction requires PKC activity. Interacts with AR. Treatment with HRG leads to dissociation from ERBB3 and increases association with AR. Interacts with NCL/nucleolin. Component of a ribonucleoprotein complex containing at least PA2G4, NCL, TOP1, PABPC2, RPLP0, acetylated histone H1 (HIST1H1A or H1F1), histone H1 2/4, RPL4, RPL8, RPL15, RPL18, RPL18A, RPL21, RPL11, RPL12, RPL28, RPL27, RPLP2 and RPL24. Interacts with HDAC2. Interacts with RB1; the interaction is enhanced upon PA2G4 dephosphorylation
Subcellular location: Cytoplasm. Nucleus, nucleolus. Note=Tranlocates to the nucleus upon treatment with HRG
Miscellaneous: Does not contain metal cofactors and does not have aminopeptidase activity
PDB structures from and Proteopedia :2Q8K (3D)
 
Secondary accessions: O43846 Q9UM59Post-translational modifications:
Phosphorylated on serine and threonine residues. Phosphorylation is enhanced by HRG treatment. Basal phosphorylation is PKC-dependent and HRG-induced phosphorylation is predominantly PKC-independent1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_006182.2
ENSEMBL proteins: ENSP00000302886
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: PA2G4 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for PA2G4: Assays for PA2G4: | Protein
Domains/ Families for PA2G4(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q9UQ80
ProtoNet protein and cluster: Q9UQ80 UniProtKB/Swiss-Prot: PA2G4_HUMAN, Q9UQ80Similarity: Belongs to the peptidase M24 family | Gene Function for PA2G4
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_006191
Applied Biosystems Silencer® siRNAs for PA2G4
Sigma-Aldrich siRNA and siRNA Panels for PA2G4  Sigma-Aldrich shRNA Panels and shRNA for PA2G4  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_006191                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_006191                                  untagged cDNA clones in CMV expression vector (see all 2): NM_006191 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_006191
UniProtKB/Swiss-Prot: PA2G4_HUMAN, Q9UQ80Function: May play a role in a ERBB3-regulated signal transduction pathway. Seems be involved in growth regulation. Acts a corepressor of the androgen receptor (AR) and is regulated by the ERBB3 ligand neuregulin-1/heregulin (HRG). Inhibits transcription of some E2F1-regulated promoters, probably by recruiting histone acetylase (HAT) activity. Binds RNA. Associates with 28S, 18S and 5.8S mature rRNAs, several rRNA precursors and probably U3 small nucleolar RNA. May be involved in regulation of intermediate and late steps of rRNA processing. May be involved in ribosome assembly. Mediates cap-independent translation of specific viral IRESs (internal ribosomal entry site) (By similarity)Genatlas biochemistry entry for PA2G4:murine cell-cycle P38-2G4 homolog,confined to the nucleus during interphase and cytoplasmic from metaphase through to telophase,widely expressed3 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for PA2G4
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| 5/8 Sigma-Aldrich "Your Favorite Gene" Pathways for PA2G4 (Your Favorite Gene powered by Ingenuity) (see all 8
) 
Gene Network CentralTM Interacting Genes and Proteins Network for PA2G4 
5/25 Interacting proteins for PA2G4 (ENSP000003028863 Q9UQ801, 2) via UniProtKB, MINT, and/or STRING (see all 25
)About this table
5/6 Gene Ontology (GO) biological process terms (links to tree view) (see all 6
): About this table
|
Drugs & Compounds for PA2G4(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for PA2G4
|
Transcripts for PA2G4(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_006191
Sigma-Aldrich siRNA and siRNA Panels for PA2G4  Sigma-Aldrich shRNA Panels and shRNA for PA2G4  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_006191 REFSEQ mRNAs for PA2G4 gene: NM_006191.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_006191               OriGene GFP tagged cDNA clone in CMV expression vector: NM_006191                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_006191                                  untagged cDNA clones in CMV expression vector (see all 2): NM_006191  Additional cDNA sequence: AK025367.1 U50137.1 24/43 DOTS entries (see all 43
): DT.91774612 DT.100034293 DT.86995864 DT.100865789 DT.100687060 DT.92363174 DT.97867576 DT.100687069 DT.100687071 DT.91670398 DT.97864060 DT.91774615 DT.91774599 DT.419579 DT.100687052 DT.91763237 DT.95340993 DT.100687065 DT.100877072 DT.455557 DT.95340889 DT.100687059 DT.100759294 DT.121158859 24/780 AceView cDNA sequences (see all 780
):CR591363 BU542868 BQ894444 AA988170 CB152588 AU142335 CB160402 BI092808 BU192021 BM842687 BQ000071 BU553213 BG289558 CF144455 BU501482 AI651014 CR595504 BM558794 BX396366 BQ877604 BU172427 BE466051 BQ678003 CR600047
highest scoring ESTs for PA2G4:U87954 AA074628 AA081122 AA081168 AA147141 AA155786 AA190417 AA346930 AA381325 AA381389 Unigene Clusters for PA2G4: Proliferation-associated 2G4, 38kDa Hs.524498 [show with all ESTs], Hs.715674 [show with all ESTs]Unigene Representative Sequences: NM_006191, AK025367
GeneLoc Exon Structure
4 Alternative Splicing Database (ASD) splice patterns (SP) for PA2G4
| ExUns: | 1a | · | 1b | · | 1c | ^ | 2 | ^ | 3a | · | 3b | ^ | 4 | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8a | · | 8b | ^ | 9 | ^ | 10a | · | 10b | ^ | 11 | ^ | 12 | ^ | 13 | |
| SP1: | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for PA2G4
1 Ensembl transcript including schematic representation: ENST00000303305
|
Expression for PA2G4
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| PA2G4 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for PA2G4
1 / 2 / 3 6 probe-sets matching PA2G4 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: --
SOURCE GeneReport for Unigene clusters: Hs.524498 Hs.715674
Expression variation in blood from EXPOLDB for PA2G4 UniProtKB/Swiss-Prot: PA2G4_HUMAN, Q9UQ80Tissue specificity: Expressed in several cell lines tested, including primary and transformed cell lines |
Orthologs for PA2G4
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for PA2G4 gene from 5/22 species (see all 22
)
About this table Species with no ortholog for PA2G4
ENSEMBL Gene Tree for PA2G4 | Paralogs for PA2G4(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for PA2G4 gene
- METAP22
Pseudogenes
- 6 related pseudogenes
|
SNPs/Variants for PA2G4(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for PA2G4 (up to first 250kb)
|
Disorders & Mutations for PA2G4
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 602145
4 Novoseek disease relationships for PA2G4 gene
About this table
|
Medical News for PA2G4(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for PA2G4 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/46 PubMed articles for PA2G4 gene (see all 46
):- Molecular cloning and mapping of a human cDNA (PA2G4) that encodes a protein highly homologous to the mouse cell cycle protein p38-2G4. (PubMed id 9345902)1, 2, 3, 4 Lamartine J.... Sylla B.S. (1997)
- Ebp1, an ErbB-3 binding protein, interacts with Rb and affects Rb transcriptional regulation. (PubMed id 11268000)1, 3, 4 Xia X.... Hamburger A.W. (2001)
- Interaction of the PA2G4 (EBP1) protein with ErbB-3 and regulation of this binding by heregulin. (PubMed id 10682683)1, 3, 4 Yoo J.Y....Hamburger A.W. (2000)
- Specificity and heregulin regulation of Ebp1 (ErbB3 binding protein 1) mediated repression of androgen receptor signalling. (PubMed id 15583694)1, 3, 4 Zhang Y. and Hamburger A.W. (2005)
- Repression of E2F1-mediated transcription by the ErbB3 binding protein Ebp1 involves histone deacetylases. (PubMed id 12682367)1, 3, 4 Zhang Y.... Hamburger A.W. (2003)
- The crystal structure of Ebp1 reveals a methionine aminopeptidase fold as binding platform for multiple interactions. (PubMed id 17765895)1, 3, 4 Kowalinski E....Sinning I. (2007)
- A probability-based approach for high-throughput protein phosphorylation analysis and site localization. (PubMed id 16964243)3, 4 Beausoleil S.A.... Gygi S.P. (2006)
- Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983)3, 4 Olsen J.V....Mann M. (2006)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- EBP1 is a nucleolar growth-regulating protein that is part of pre- ribosomal ribonucleoprotein complexes. (PubMed id 15064750)3, 4 Squatrito M.... Draetta G.F. (2004)
|
Search for PA2G4
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing PA2G4
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing PA2G4
(According to HUGE)
About This Section
| -- |
Specialized Databases showing PA2G4(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for PA2G4(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
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