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P2RY4 Gene

protein-coding   GIFtS: 54

GC0XM069394
pyrimidinergic receptor P2Y, G-protein coupled, 4
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
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Aliases
NRU 1, 2, 3, 5
OTTHUMP00000023468 2
P2P 1, 2, 3
P2Y4 1, 2, 3, 5
UNR 1, 2, 3
Descriptions
P2Y purinoceptor 4 2
Uridine nucleotide receptor 2, 3
pyrimidinergic receptor P2Y, G-protein coupled, 4 2
pyrimidinergic receptor P2Y4 2
External Ids
HGNC: 85421
Entrez Gene: 50302
UniProtKB: P515823
Ensembl: ENSG000001869127
Search outside databases for aliases for P2RY4 gene

Previous GC identifers: GC0XM065656 GC0XM066955 GC0XM067711 GC0XM068345 GC0XM069261

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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EntrezGene summary for P2RY4:
The product of this gene belongs to the family of G-protein coupled receptors. This family has
several receptor subtypes with different pharmacological selectivity, which overlaps in some
cases, for various adenosine and uridine nucleotides. This receptor is responsive to uridine
nucleotides, partially responsive to ATP, and not responsive to ADP. [provided by RefSeq]

UniProtKB/Swiss-Prot: P2RY4_HUMAN, P51582
Function: Receptor for UTP and UDP coupled to G-proteins that activate a
phosphatidylinositol-calcium second messenger system. Not activated by ATP or ADP

Gene Wiki entry for P2RY4

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the P2RY4 gene  

Entrez Gene cytogenetic band: Xq13   Ensembl cytogenetic band:  Xq13.1   HGNC cytogenetic band: Xq13

P2RY4 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome X         GeneLoc Exon Structure

GeneLoc location for GC0XM069394:     (about GC identifiers)

Start:
69,394,741 bp from pter
End:
69,396,379 bp from pter
Size:
1,639 bases
Orientation:
minus strand
RefSeq DNA sequence:
NC_000023.9  NT_011669.16  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
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UniProtKB/Swiss-Prot: P2RY4_HUMAN, P51582 (See protein sequence)
Recommended Name: P2Y purinoceptor 4  
Size: 365 amino acids; 40963 Da
Subcellular location: Cell membrane; Multi-pass membrane protein
PDB structures from and Proteopedia :
2B6Q (3D)    
Secondary accessions: Q4VBB7 Q4VBB8 Q502W2 Q5JT22

Post-translational modifications:

  • Phosphorylation of Ser-333 and Ser-334 is a key step in agonist-dependent desensitization and loss
    of surface P2RY4. This phosphorylation does not involve PKC, nor other calcium activated kinases1


  • REFSEQ proteins: NP_002556.1  

    ENSEMBL proteins: 
    ENSP00000363643 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Browse Purified and Recombinant Proteins at Millipore
    Sigma-Aldrich Proteins and CompoZr ZFN and AQUA Peptides for P2RY4  
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Recombinant Proteins from Abcam (P2Y4)
    Human Recombinant Proteins from Abnova (P2RY4)
                    Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

    2 Gene Ontology (GO) cellular component terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005886 plasma membrane IEA--
    GO:0005887 integral to plasma membrane TAS8537336
    About this table

    Antibodies for P2RY4: 
    Browse Antibodies Central at Invitrogen
    Millipore Mono- and Polyclonal Antibodies for the study of P2RY4
    Sigma-Aldrich Antibody Arrays and Antibodies for P2RY4
    Browse R&D Systems for Antibodies
    Antibodies from Abcam (P2Y4), each with their AbpromiseSM
    Browse Abnova for Monoclonal and Polyclonal Antibodies
    Search Novus for antibodies for P2RY4

    Assays for P2RY4: 
    Browse Invitrogen for biochemical assays
    Browse Kits and Assays available from Millipore
    Browse R&D Systems for biochemical assays
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    4 InterPro domains/families:
     IPR017452 GPCR_Rhodpsn_supfam
     IPR000018 P2Y4_purnocptor
     IPR000276 7TM_GPCR_Rhodpsn
     IPR002286 P2_purnocptor


       GeneDecks  P2RY4 for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry P51582

    ProtoNet protein and cluster: P51582

    2 Blocks protein families:
    IPB000018 P2Y4 purinoceptor signature
    IPB002286 P2 purinoceptor signature


    UniProtKB/Swiss-Prot: P2RY4_HUMAN, P51582
    Similarity: Belongs to the G-protein coupled receptor 1 family

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (P2RY4)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (P2RY4)
                  OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002565

                  Applied Biosystems Silencer® siRNAs for P2RY4

                  Sigma-Aldrich siRNA and siRNA Panels for P2RY4  
                         Sigma-Aldrich shRNA Panels and shRNA for P2RY4  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Invitrogen Clones for P2RY4
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                  OriGene GFP tagged cDNA clone in CMV expression vector: NM_002565
                                     Myc/DDK tagged cDNA clone in CMV expression vector: NM_002565
                                     untagged cDNA clone in CMV expression vector: NM_002565 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_002565

    UniProtKB/Swiss-Prot: P2RY4_HUMAN, P51582
    Function: Receptor for UTP and UDP coupled to G-proteins that activate a
    phosphatidylinositol-calcium second messenger system. Not activated by ATP or ADP

    Genatlas biochemistry entry for P2RY4:
    purinoceptor P2Y type 4,group 3,metabotropic,expressed in bone,osteoblastic and brain cell
    lines,predominantly responding to UTP,G protein coupled receptor superfamily

    2 MGI mutant phenotypes (inferred from 2 alleles(MGI details for P2ry4):

    digestive/alimentarylethality-prenatal/perinatal

    3 Gene Ontology (GO) molecular function terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004872 receptor activity IEA--
    GO:0004930 G-protein coupled receptor activity IEA--
    GO:0045030 UTP-activated nucleotide receptor activity IEA--
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section


    1 Millipore Pathway for P2RY4
     Signal transduction IP3 signaling

       GeneDecks  P2RY4 for the pathways selected above  
    About GeneDecksing

    1 Sigma-Aldrich "Your Favorite Gene" Pathway for  P2RY4  (Your Favorite Gene powered by Ingenuity) 
     G-Protein Coupled Receptor Signaling

       GeneDecks  P2RY4 for the pathways selected above  
    About GeneDecksing

    1 Kegg Pathway  (Kegg details for P2RY4):
     hsa04080 Neuroactive ligand-receptor interaction

       GeneDecks  P2RY4 for the pathways selected above  
    About GeneDecksing
     Gene Network CentralTM Interacting Genes and Proteins Network for  P2RY4 


    5/9 Interacting proteins for P2RY4 (ENSP000003636433) via UniProtKB, MINT, and/or STRING (see all 9 )
    InteractantInteraction Details
    GeneCardExternal ID(s)
    P2RX1ENSP000002255383STRING (score=.807)
    P2RX4ENSP000003366073STRING (score=.807)
    P2RX7ENSP000002618263STRING (score=.806)
    P2RX2ENSP000003433393STRING (score=.804)
    P2RX3ENSP000002633143STRING (score=.801)
    About this table

    4 Gene Ontology (GO) biological process terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007165 signal transduction IEA--
    GO:0007200 activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger TAS8537336
    GO:0007204 elevation of cytosolic calcium ion concentration TAS8537335
    GO:0030321 transepithelial chloride transport IEA--
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Browse drugs & compounds from Enzo Life Sciences
    Sigma-Aldrich Small Molecules for P2RY4:
    Antagonist Agonist

    Compounds for P2RY4 available from Tocris Bioscience
    CompoundAction CAS number
    UTPgammaS trisodium saltSelective P2Y2/4 agonist
    Suramin hexasodium saltNon-selective P2 antagonist[129-46-4]
    2-Methylthioadenosine triphosphate tetrasodium saltP2 purinergic agonist[43170-89-4]
    PPADS tetrasodium saltP2 purinergic antagonist[149017-66-3]
    About this table


    10/15 Novoseek chemical compound relationships for P2RY4 gene (see all 15 )
    Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    mrs2279 93.44 1 11959804 (1)
    udpbetas 87.90 1 12737633 (1)
    5-bromo-utp 85.73 1 17125260 (1)
    mrs2179 85.52 1 12694404 (1)
    2-methylthio-atp 81.08 2 11032896 (1)
    atp 76.87 27 8700127 (3), 9690862 (2), 9415702 (1), 11032896 (1) (see all 20)
    adp 73.51 2 18604596 (1)
    uridine diphosphate 63.80 2 18604596 (1)
    udpglucose 59.18 2 16475938 (1)
    ribose 55.61 3 16359641 (2), 18514530 (1)
    About this table


    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (P2RY4)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (P2RY4)
                  OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002565

                  Sigma-Aldrich siRNA and siRNA Panels for P2RY4  
                         Sigma-Aldrich shRNA Panels and shRNA for P2RY4  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_002565  

    REFSEQ mRNAs for P2RY4 gene: 

    NM_002565.3   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_002565  

                  OriGene GFP tagged cDNA clone in CMV expression vector: NM_002565
                                     Myc/DDK tagged cDNA clone in CMV expression vector: NM_002565
                                     untagged cDNA clone in CMV expression vector: NM_002565 

    Additional cDNA sequence: 

    BC095503.1 BC096067.3 BC096068.1 BC096069.1 BC096070.1 

    1 DOTS entry:

    DT.91905374 

    6 AceView cDNA sequences:

    CN839938 NM_002565 CN839909 CN836358 CN843809 CN836272 

    highest scoring ESTs for P2RY4:

    CN836272 CN836358 CN839909 CN839938 CN843809 BC095503 BC096067 BC096068 BC096069 BC096070 

    Unigene Cluster for P2RY4:

    Pyrimidinergic receptor P2Y, G-protein coupled, 4
    Hs.673854  [show with all ESTs]
    Unigene Representative Sequence: NM_002565


    GeneLoc Exon Structure

    1 Ensembl transcript including schematic representation:
    ENST00000374519  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    P2RY4 expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for P2RY4

    1 / 2 / 3

    2 probe-sets matching P2RY4 gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

    221466_at2, 3 U133-A 1 1.00 1.00 -- -- NM_002565 0.40 0.67 0.55 1

    221466_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
    About this table
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: TGTTTCTCTA

    SOURCE GeneReport for Unigene cluster: Hs.673854

    UniProtKB/Swiss-Prot: P2RY4_HUMAN, P51582
    Tissue specificity: Pancreas

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for P2RY4 gene from 5/6 species (see all 6 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    chimpanzee
    (Pan troglodytes)
    P2RY41   -- pyrimidinergic receptor P2Y, G-protein coupled, 4 99.43(n)
    99.32(a)
    473656  XM_529029.2  XP_529029.2 
    cow
    (Bos taurus)
    P2RY41   -- pyrimidinergic receptor P2Y, G-protein coupled, 4 85.3(n)
    84.38(a)
    514653  XM_592537.2  XP_592537.1 
    rat
    (Rattus norvegicus)
    P2ry41   -- pyrimidinergic receptor P2Y, G-protein coupled, 4 84.03(n)
    83.66(a)
    63843  NM_031680.1  NP_113868.1 
    mouse
    (Mus musculus)
    P2ry41, 5 X5
    pyrimidinergic receptor P2Y, G-protein coupled, 41, 5 83.84(n)1
    81.72(a)1
    573851  NM_020621.31  NP_065646.11 
     AJ2777525  AK0763645  (see all 8)
    zebrafish
    (Danio rerio)
    pr2y4l1   -- pyrimidinergic receptor P2Y, G-protein coupled, 4-like 61.83(n)
    61.83(a)
    368435  NM_001004501.2  NP_001004501.1 
    About this table        Species with no ortholog for P2RY4

    ENSEMBL Gene Tree for P2RY4
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

    Paralogs for P2RY4 gene
    P2RY12  P2RY62  P2RY22  

    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
    About This Section


    10/21 NCBI SNPs in P2RY4 are shown (see all 21 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 23)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr X posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    rs11521871,2
    A,C,F,H69395667(+) CTTTGT/GTGCTG 1 T/N mis1 ese311Minor allele frequency- G:0.47EU EA WA NA 841
    --
    rs11521851,2
    C,F,H69397971(+) gttgtC/Tgtttt 1 -- ng317Minor allele frequency- T:0.34EU EA WA NA 562
    rs38297091,2
    C,F,H69395500(+) TGCAGA/CGCCTG 1 S/A mis112Minor allele frequency- C:0.26EU EA WA 1046
    rs11521881,2
    C,H69395628(+) CTTCAG/AGCCGA 1 L/P mis1 ese34Minor allele frequency- A:0.00EU EA WA 410
    rs126902401,2
    H69396575(+) CACAGC/ATATAT 1 -- ng314Minor allele frequency- A:0.00EU EA WA 412
    rs38297081,2
    C,F,H69395474(+) AGAGAG/TCGGAG 1 R/R syn17Minor allele frequency- T:0.21NA EU EA WA 535
    rs11521891,2
    C69395204(+) GAAGAA/GGCAGC 1 A/A syn1 ese3 trp30--------
    --
    rs562174511,2
    --69395461(+) AGCTAC/TGGTGC 1 I/V mis10--------
    --
    rs78874131,2
    --69398097(+) tcagaA/Cctctg 1 -- ng31 tfbs30--------
    --
    rs726288591,2
    --69394303(+) ATAGAC/TGTGAG 1 -- ng510--------
    About this table

    HapMap Linkage Disequilibrium images for P2RY4 (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
    About This Section

    OMIM: 300038

    3 Novoseek disease relationships for P2RY4 gene

    Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    astrocytoma 72.75 9 8700127 (1), 8913364 (1), 11711032 (1), 16607854 (1) (see all 9)
    glioma 9.87 5 8700127 (1), 8913364 (1), 9131407 (1)
    tumors 1.42 1 12880424 (1)
    About this table

    (Possibly Related Articles in Doctor's Guide)
    About This Section

      --

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/108 PubMed articles for P2RY4 gene (see all 108 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 5030 HGNC: 8542 AceView: P2RY4 Ensembl:ENSG00000186912 euGenes: HUgn5030
    ECgene: P2RY4 H-InvDB: P2RY4
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

      --
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



    Products for P2RY4:
     TaqMan ® Gene Expression Assays
     TaqMan ® Genotyping Assays
      Free SNP selection tool



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     Predesigned and custom siRNAs for P2RY4 Antibodies for P2RY4
     Explore super-pooled esiRNAs Proteins for P2RY4
     Lentivirus-delivered shRNAs for P2RY4 Small molecules for P2RY4
     "Your Favorite Gene" Pathwaysfeedback


      
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     Search OriGene for P2RY4
     Tocris compounds for P2RY4




     Search www.enzolifesicences.com for proteins, assays, substrates, inhibitors & antibodies
     Search Novus for antibodies for P2RY4

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