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Aliases for P2RY4 Gene

Aliases for P2RY4 Gene

  • Pyrimidinergic Receptor P2Y4 2 3 5
  • Pyrimidinergic Receptor P2Y, G-Protein Coupled, 4 2 3
  • Uridine Nucleotide Receptor 3 4
  • P2Y4 3 4
  • UNR 3 4
  • NRU 3 4
  • P2P 3 4
  • P2Y Purinoceptor 4 3

External Ids for P2RY4 Gene

Previous GeneCards Identifiers for P2RY4 Gene

  • GC0XM065656
  • GC0XM066955
  • GC0XM067711
  • GC0XM068345
  • GC0XM069261
  • GC0XM069394
  • GC0XM069478
  • GC0XM063299

Summaries for P2RY4 Gene

Entrez Gene Summary for P2RY4 Gene

  • The product of this gene belongs to the family of G-protein coupled receptors. This family has several receptor subtypes with different pharmacological selectivity, which overlaps in some cases, for various adenosine and uridine nucleotides. This receptor is responsive to uridine nucleotides, partially responsive to ATP, and not responsive to ADP. [provided by RefSeq, Jul 2008]

GeneCards Summary for P2RY4 Gene

P2RY4 (Pyrimidinergic Receptor P2Y4) is a Protein Coding gene. Among its related pathways are Nucleotide-like (purinergic) receptors and GPCR Pathway. GO annotations related to this gene include G-protein coupled receptor activity and uridine nucleotide receptor activity. An important paralog of this gene is P2RY2.

UniProtKB/Swiss-Prot for P2RY4 Gene

  • Receptor for UTP and UDP coupled to G-proteins that activate a phosphatidylinositol-calcium second messenger system. Not activated by ATP or ADP.

Tocris Summary for P2RY4 Gene

  • P2Y receptors are G-protein-coupled receptors that respond to extracellular purine and pyrimidine nucleotides. To date, eight mammalian P2Y receptors are known (P2Y1, P2Y2, P2Y4, P2Y6, P2Y11-14) as well as the non-mammalian p2y3, p2y8 and p2y receptors.

Gene Wiki entry for P2RY4 Gene

Additional gene information for P2RY4 Gene

No data available for CIViC summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for P2RY4 Gene

Genomics for P2RY4 Gene

Regulatory Elements for P2RY4 Gene

Enhancers for P2RY4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XH071181 2 FANTOM5 Ensembl ENCODE dbSUPER 19.9 -923.1 -923068 3 PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 ZNF766 TAF1 NONO OGT MED12 LOC100420758 ENSG00000229601 ARR3 P2RY4 RTL5 RPS23P8
GH0XH071145 1.2 ENCODE dbSUPER 10.5 -886.6 -886606 1 HDGF ATF1 FOXA2 ARNT ZNF493 TCF12 GLIS2 KLF7 ATF7 SP3 MED12 LOC392489 TAF1 NONO ZMYM3 LOC100420758 ARR3 P2RY4 OGT RPS23P8
GH0XH071250 1 ENCODE 11.3 -994.0 -993983 6 HDGF PKNOX1 ARNT SIN3A FEZF1 GLI4 ZNF2 BRCA1 YY1 ZNF766 TAF1 LOC100420758 MED12 NONO OGT ERCC6L ARR3 ENSG00000229601 SNX12 P2RY4
GH0XH071207 0.7 Ensembl 10.5 -948.0 -947997 0 SMARCE1 SP3 MCM3 YY2 ZSCAN4 ZFHX2 EGR1 FOS ZNF600 TRIM24 MED12 LOC392489 TAF1 NONO LOC100420758 ARR3 P2RY4 OGT RPS23P8 ENSG00000229601
GH0XH070253 0.7 ENCODE 0.4 +5.6 5589 2 SOX13 GATAD2A FOXA2 FOXA3 CEBPG RARA FOSL1 JUND TCF7 FOS RNA5SP507 P2RY4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around P2RY4 on UCSC Golden Path with GeneCards custom track

Genomic Location for P2RY4 Gene

Chromosome:
X
Start:
70,258,166 bp from pter
End:
70,259,804 bp from pter
Size:
1,639 bases
Orientation:
Minus strand

Genomic View for P2RY4 Gene

Genes around P2RY4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
P2RY4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for P2RY4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for P2RY4 Gene

Proteins for P2RY4 Gene

  • Protein details for P2RY4 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P51582-P2RY4_HUMAN
    Recommended name:
    P2Y purinoceptor 4
    Protein Accession:
    P51582
    Secondary Accessions:
    • Q4VBB7
    • Q4VBB8
    • Q502W2
    • Q5JT22

    Protein attributes for P2RY4 Gene

    Size:
    365 amino acids
    Molecular mass:
    40963 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for P2RY4 Gene

neXtProt entry for P2RY4 Gene

Post-translational modifications for P2RY4 Gene

  • Phosphorylation of Ser-333 and Ser-334 is a key step in agonist-dependent desensitization and loss of surface P2RY4. This phosphorylation does not involve PKC, nor other calcium activated kinases.
  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for P2RY4 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for P2RY4 Gene

Domains & Families for P2RY4 Gene

Gene Families for P2RY4 Gene

HGNC:
IUPHAR :
Human Protein Atlas (HPA):
  • G-protein coupled receptors
  • Predicted membrane proteins

Protein Domains for P2RY4 Gene

Suggested Antigen Peptide Sequences for P2RY4 Gene

Graphical View of Domain Structure for InterPro Entry

P51582

UniProtKB/Swiss-Prot:

P2RY4_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with P2RY4: view

Function for P2RY4 Gene

Molecular function for P2RY4 Gene

GENATLAS Biochemistry:
purinoceptor P2Y type 4,group 3,metabotropic,expressed in bone,osteoblastic and brain cell lines,predominantly responding to UTP,G protein coupled receptor superfamily
UniProtKB/Swiss-Prot Function:
Receptor for UTP and UDP coupled to G-proteins that activate a phosphatidylinositol-calcium second messenger system. Not activated by ATP or ADP.

Gene Ontology (GO) - Molecular Function for P2RY4 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G-protein coupled receptor activity IEA --
GO:0005524 ATP binding IEA --
GO:0015065 uridine nucleotide receptor activity TAS 8537335
GO:0045028 G-protein coupled purinergic nucleotide receptor activity IEA --
GO:0045030 UTP-activated nucleotide receptor activity IEA --
genes like me logo Genes that share ontologies with P2RY4: view
genes like me logo Genes that share phenotypes with P2RY4: view

Animal Models for P2RY4 Gene

MGI Knock Outs for P2RY4:

Animal Model Products

  • Taconic Biosciences Mouse Models for P2RY4

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for P2RY4
  • Applied Biological Materials Clones for P2RY4
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for P2RY4 Gene

Localization for P2RY4 Gene

Subcellular locations from UniProtKB/Swiss-Prot for P2RY4 Gene

Cell membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for P2RY4 gene
Compartment Confidence
plasma membrane 5
extracellular 2
cytoskeleton 1
cytosol 1

Gene Ontology (GO) - Cellular Components for P2RY4 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0005887 integral component of plasma membrane TAS 8537336
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
GO:0016323 basolateral plasma membrane IEA --
genes like me logo Genes that share ontologies with P2RY4: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for P2RY4 Gene

Pathways & Interactions for P2RY4 Gene

genes like me logo Genes that share pathways with P2RY4: view

Pathways by source for P2RY4 Gene

Gene Ontology (GO) - Biological Process for P2RY4 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007165 signal transduction IEA --
GO:0007186 G-protein coupled receptor signaling pathway IEA --
GO:0007200 phospholipase C-activating G-protein coupled receptor signaling pathway TAS 8537336
GO:0007204 positive regulation of cytosolic calcium ion concentration TAS 8537335
GO:0030321 transepithelial chloride transport IEA --
genes like me logo Genes that share ontologies with P2RY4: view

No data available for SIGNOR curated interactions for P2RY4 Gene

Drugs & Compounds for P2RY4 Gene

(24) Drugs for P2RY4 Gene - From: DGIdb, IUPHAR, HMDB, Tocris, and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Guanosine triphosphate Experimental Pharma 0
Uridine triphosphate Experimental Pharma 0
Denufosol Investigational Pharma 0
MC-1 Investigational Pharma 0
PPADS Pharma Antagonist 0

(19) Additional Compounds for P2RY4 Gene - From: IUPHAR, Novoseek, and Tocris

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
2-amino-uridine-5-monophosphate
Partial agonist, Agonist
gtp
Partial agonist, Agonist
N<sup>4</sup>-phenylethoxycytidine-5?a?-triphosphate
Full agonist, Agonist
Up<sub>4</sub>dC
Full agonist, Agonist
Up<sub>4</sub>U
Full agonist, Agonist

(5) Tocris Compounds for P2RY4 Gene

Compound Action Cas Number
2-Methylthioadenosine diphosphate trisodium salt Potent agonist for P2Y1, P2Y12 and P2Y13 475193-31-8
AR-C 118925XX Selective, competitive P2Y2 receptor antagonist 216657-60-2
MRS 2500 tetraammonium salt Extremely potent and selective P2Y1 antagonist 630103-23-0
PPTN hydrochloride High affinity and selective P2Y14 antagonist
SAR 216471 hydrochloride Potent P2Y12 antagonist; orally available 1279829-64-9
genes like me logo Genes that share compounds with P2RY4: view

Transcripts for P2RY4 Gene

mRNA/cDNA for P2RY4 Gene

(1) REFSEQ mRNAs :
(7) Additional mRNA sequences :
(6) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for P2RY4 Gene

Pyrimidinergic receptor P2Y, G-protein coupled, 4:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for P2RY4
  • Applied Biological Materials Clones for P2RY4
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for P2RY4 Gene

No ASD Table

Relevant External Links for P2RY4 Gene

GeneLoc Exon Structure for
P2RY4
ECgene alternative splicing isoforms for
P2RY4

Expression for P2RY4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for P2RY4 Gene

mRNA differential expression in normal tissues according to GTEx for P2RY4 Gene

This gene is overexpressed in Small Intestine - Terminal Ileum (x6.2) and Skin - Not Sun Exposed (Suprapubic) (x4.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for P2RY4 Gene



NURSA nuclear receptor signaling pathways regulating expression of P2RY4 Gene:

P2RY4

SOURCE GeneReport for Unigene cluster for P2RY4 Gene:

Hs.673854

mRNA Expression by UniProt/SwissProt for P2RY4 Gene:

P51582-P2RY4_HUMAN
Tissue specificity: Pancreas.

Evidence on tissue expression from TISSUES for P2RY4 Gene

  • Pancreas(4.2)
  • Nervous system(2)
genes like me logo Genes that share expression patterns with P2RY4: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein tissue co-expression partners and Phenotype-based relationships between genes and organs from Gene ORGANizer for P2RY4 Gene

Orthologs for P2RY4 Gene

This gene was present in the common ancestor of chordates.

Orthologs for P2RY4 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia P2RY4 33 34
  • 98.36 (n)
cow
(Bos Taurus)
Mammalia P2RY4 33 34
  • 85.3 (n)
dog
(Canis familiaris)
Mammalia P2RY4 33
  • 84.67 (n)
-- 34
  • 39 (a)
ManyToMany
rat
(Rattus norvegicus)
Mammalia P2ry4 33
  • 83.86 (n)
mouse
(Mus musculus)
Mammalia P2ry4 33 16 34
  • 83.67 (n)
oppossum
(Monodelphis domestica)
Mammalia P2RY4 34
  • 81 (a)
OneToOne
chicken
(Gallus gallus)
Aves LOC100857687 33
  • 66.56 (n)
P2RY4 34
  • 54 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia p2ry4 33
  • 60.38 (n)
African clawed frog
(Xenopus laevis)
Amphibia p2ry4-prov 33
zebrafish
(Danio rerio)
Actinopterygii pr2y4l 33 34
  • 61.64 (n)
Species where no ortholog for P2RY4 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for P2RY4 Gene

ENSEMBL:
Gene Tree for P2RY4 (if available)
TreeFam:
Gene Tree for P2RY4 (if available)

Paralogs for P2RY4 Gene

Paralogs for P2RY4 Gene

genes like me logo Genes that share paralogs with P2RY4: view

Variants for P2RY4 Gene

Sequence variations from dbSNP and Humsavar for P2RY4 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs1000313857 -- 70,261,719(+) GAAGG(C/T)ACTTA upstream-variant-2KB
rs1006048686 -- 70,260,360(+) GGGCC(A/C)AGCGA upstream-variant-2KB
rs1008944839 -- 70,260,825(+) AGCAT(C/T)CATAA upstream-variant-2KB
rs1008997147 -- 70,261,295(+) TTAAT(A/G)AGTAA upstream-variant-2KB
rs1009168180 -- 70,260,760(+) GTCTT(C/G)CTAGT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for P2RY4 Gene

Variant ID Type Subtype PubMed ID
esv1584074 OTHER inversion 17803354
nsv519108 CNV loss 19592680
nsv525258 CNV gain 19592680

Variation tolerance for P2RY4 Gene

Residual Variation Intolerance Score: 88.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 5.22; 69.91% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for P2RY4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
P2RY4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for P2RY4 Gene

Disorders for P2RY4 Gene

Relevant External Links for P2RY4

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
P2RY4

No disorders were found for P2RY4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for P2RY4 Gene

Publications for P2RY4 Gene

  1. Cloning and functional expression of a human uridine nucleotide receptor. (PMID: 8537336) Communi D … Boeynaems JM (The Journal of biological chemistry 1995) 2 3 4 22 60
  2. Differential regulation of the uridine nucleotide-activated P2Y4 and P2Y6 receptors. SER-333 and SER-334 in the carboxyl terminus are involved in agonist-dependent phosphorylation desensitization and internalization of the P2Y4 receptor. (PMID: 11114308) Brinson AE … Harden TK (The Journal of biological chemistry 2001) 3 4 22 60
  3. Cloning, expression, and chromosomal localization of the human uridine nucleotide receptor gene. (PMID: 8537335) Nguyen T … O'Dowd BF (The Journal of biological chemistry 1995) 3 4 22 60
  4. ATP modulates transcription factors through P2Y2 and P2Y4 receptors via PKC/MAPKs and PKC/Src pathways in MCF-7 cells. (PMID: 19900397) Scodelaro Bilbao P … Santillán G (Archives of biochemistry and biophysics 2010) 3 22 60
  5. Extracellular ATP activates MAP kinase cascades through a P2Y purinergic receptor in the human intestinal Caco-2 cell line. (PMID: 19836435) Buzzi N … de Boland AR (Biochimica et biophysica acta 2009) 3 22 60

Products for P2RY4 Gene

  • Addgene plasmids for P2RY4

Sources for P2RY4 Gene

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