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Aliases & Descriptions for P2RX5
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases MGC47755 2 P2X5 1 , 2 , 3 P2X5R 2
Descriptions ATP receptor 3 ATP receptor subunit 2 P2X purinoceptor 5 2 Purinergic receptor 3 ionotropic ATP receptor P2X5 2 purinergic receptor P2X ligand gated ion channel 5 2 purinergic receptor P2X, ligand-gated ion channel, 5 2 purinergic receptor P2X5 2
Search outside databases for aliases for P2RX5 genePrevious GC identifers: GC17M003890 GC17M003526 GC17M003784 GC17M003785
Summaries for P2RX5 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for P2RX5 : The product of this gene belongs to the family of purinoceptors for ATP. This receptor functions asa ligand-gated ion channel. Several characteristic motifs of ATP-gated channels are present in itsprimary structure, but, unlike other members of the purinoceptors family, this receptor has only asingle transmembrane domain. Three transcript variants encoding distinct isoforms have beenidentified for this gene. [provided by RefSeq] UniProtKB/Swiss-Prot: P2RX5_HUMAN, Q93086 Function : Receptor for ATP that acts as a ligand gated ion channel
Gene Wiki entry for P2RX5
Genomic Location for P2RX5
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the P2RX5 gene Entrez Gene cytogenetic band: 17p13.3 Ensembl cytogenetic band: 17p13.3 HGNC cytogenetic band: 17p13.3 P2RX5 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 17 GeneLoc Exon Structure
GeneLoc location for GC17M003523:
(about GC identifiers )
Start:
3,522,497 bp from pter
End:
3,546,332 bp from pter
Size:
23,836 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000017.9 NT_010718.15 Proteins for P2RX5
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: P2RX5_HUMAN, Q93086 (See
protein sequence )Recommended Name: P2X purinoceptor 5 Size : 422 amino acids; 47205 Da
Subunit : Homo- or heteropolymers (By similarity)
Subcellular location : Membrane; Multi-pass membrane protein
Sequence caution : Sequence=AAF43106.1; Type=Erroneous gene model prediction; Sequence=AK307959;Type=Frameshift; Positions=112; Sequence=BAD92860.1; Type=Frameshift; Positions=112;Sequence=BC028084; Type=Frameshift; Positions=112;
Secondary accessions : O43450 O75540 Q59F38 Q8IXW4 Q93087 Q9NZV0Alternative splicing : 4 isoforms : Q93086-3 Q93086-1 Q93086-2 Q93086-4
REFSEQ proteins (3 alternative transcripts):
NP_002552.2 NP_778255.1 NP_778256.1 ENSEMBL proteins: ENSP00000342161 ENSP00000225328 ENSP00000371255 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for P2RX5: Assays for P2RX5:
Protein
Domains/ Families for P2RX5(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q93086 ProtoNet protein and cluster: Q93086
2 Blocks protein families : IPB001429 ATP P2X receptor IPB003048 P2X5 purinoceptor signature UniProtKB/Swiss-Prot: P2RX5_HUMAN, Q93086 Similarity : Belongs to the P2X receptor family
Gene Function for P2RX5
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
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Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_002561 Applied Biosystems Silencer ® siRNAs for P2RX5 Sigma-Aldrich siRNA and siRNA Panels for P2RX5 Sigma-Aldrich shRNA Panels and shRNA for P2RX5 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_002561                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_002561                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_002561  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_002561 UniProtKB/Swiss-Prot: P2RX5_HUMAN, Q93086 Function : Receptor for ATP that acts as a ligand gated ion channel
5/7 Gene Ontology (GO) molecular function terms (links to tree view) (see all 7
):
About this table
Pathways & Interactions for P2RX5
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/26 Interacting proteins for P2RX5 (ENSP00000371255 3 ) via UniProtKB, MINT, and/or STRING (see all 26
)About this table 5 Gene Ontology (GO) biological process terms (links to tree view) :
About this table
Drugs & Compounds for P2RX5 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Compounds for P2RX5 available from Tocris Bioscience About this table 2 Novoseek chemical compound relationships for P2RX5 gene
About this table
Transcripts for P2RX5(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
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shRNA from
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OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_002561 Sigma-Aldrich siRNA and siRNA Panels for P2RX5 Sigma-Aldrich shRNA Panels and shRNA for P2RX5 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_002561 NM_175080 NM_175081
REFSEQ mRNAs for P2RX5 gene (3 alternative transcripts): NM_002561.2 NM_175080.1 NM_175081.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002561 NM_175080 NM_175081
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_002561                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_002561                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_002561  
Additional cDNA sequence: AF016709.1 AF070573.1 AK290889.1 AK293610.1 AK307959.1 BC006220.2 BC008319.1 BC016917.1 BC028084.1 BC039015.1 CR612864.1 CR624034.1 DQ234349.1 DQ851492.1 U49395.1 U49396.1
10 DOTS entries : DT.100777390 DT.120962919 DT.441930 DT.91864652 DT.100703680 DT.91750971 DT.213993 DT.99936057 DT.75146946 DT.86846987
24/114 AceView cDNA sequences (see all 114
):BI253383 AI090922 BQ217944 BQ222641 AA836604 BQ055487 BM693531 CR612864 NM_175080 BC008319 BQ270311 AI920988 CR624034 NM_175081 BC039015 BE906689 AI524622 AA327481 BM932250 AF070573 BC028084 NM_002561 BC016917 AF016709
highest scoring ESTs for P2RX5 :U49395 AF016709 AF070573 BC006220 BC008319 BC016917 BC028084 BC039015 BE791872 BI837109
Unigene Cluster for P2RX5: Purinergic receptor P2X, ligand-gated ion channel, 5 Hs.408615 [show with all ESTs ] Unigene Representative Sequence: NM_002561 GeneLoc Exon Structure 5 Alternative Splicing Database (ASD) splice patterns (SP) for P2RX5 ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 SP1 :         -                           SP2 :         -     -                       SP3 :         -     -                       SP4 :         -                           SP5 :             -                      
About this scheme ECgene alternative splicing isoforms for P2RX5 3 Ensembl transcripts including schematic representations : ENST00000345901
ENST00000225328
ENST00000381833
Expression for P2RX5
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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P2RX5 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for P2RX5 1 / 2 / 3
3 probe-sets matching P2RX5 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: CCACTTTGGCSOURCE GeneReport for Unigene cluster: Hs.408615 Expression variation in blood from EXPOLDB for P2RX5
UniProtKB/Swiss-Prot: P2RX5_HUMAN, Q93086 Tissue specificity : Expressed at high levels in brain and immune system
Orthologs for P2RX5
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for P2RX5 gene from 5/8 species (see all 8
)
Organism
Gene
Locus
Description
Human Similarity
NCBI accessions
dog (Canis familiaris)
P2RX51
--
purinergic receptor P2X, ligand-gated ion channel, more
81.73(n) 76.54(a)
448785 XM_548343.2 XP_548343.2
chimpanzee (Pan troglodytes)
P2RX51
--
purinergic receptor P2X, ligand-gated ion channel, more
98.82(n) 99.53(a)
454434 XM_511272.2 XP_511272.2
cow (Bos taurus)
P2RX51
--
purinergic receptor P2X, ligand-gated ion channel, more
84.23(n) 77.46(a)
338035 XM_594012.3 XP_594012.3
rat (Rattus norvegicus)
P2rx51
--
purinergic receptor P2X, ligand-gated ion channel, more
75.43(n) 69.59(a)
113995 NM_080780.2 NP_542958.2
mouse (Mus musculus)
P2rx51 , 5
115
purinergic receptor P2X, ligand-gated ion channel, more 1, 5
75(n) 1 69.42(a) 1
94045 1 NM_033321.2 1 NP_201578.1 1 AF333331 5 AF333332 5 (see all 12 )
About this table Species with no ortholog for P2RX5 ENSEMBL Gene Tree for P2RX5 Paralogs for P2RX5 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for P2RX5 gene P2RX1 2 P2RX4 2 P2RX6 2 P2RX7 2
SNPs/Variants for P2RX5 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for P2RX5 (up to first 250kb)
Disorders & Mutations for P2RX5
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 602836 1 Novoseek disease relationship for P2RX5 gene
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
tumors
0.00
1
12880424 (1)
About this table Human Gene Mutation Database : P2RX5
Medical News for P2RX5 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for P2RX5 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/40 PubMed articles for P2RX5 gene (see all 40
):
Search for P2RX5
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing P2RX5
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing P2RX5
(According to HUGE )
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--
Specialized Databases showing P2RX5 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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Name Description
Wikipedia http://en.wikipedia.org/wiki/P2X_receptor
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-- Services for P2RX5 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for P2RX5:
Tocris compounds for P2RX5
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