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Aliases for OVOL3 Gene

Aliases for OVOL3 Gene

  • Ovo-Like Zinc Finger 3 2 3
  • Putative Transcription Factor Ovo-Like Protein 3 3
  • Ovo-Like 3 (Drosophila) 2
  • OVO Homolog-Like 3 3
  • Ovo-Like 3 3
  • HOVO3 3

External Ids for OVOL3 Gene

Previous GeneCards Identifiers for OVOL3 Gene

  • GC19P037241
  • GC19P037050
  • GC19P041278
  • GC19U900376
  • GC19P036603

Summaries for OVOL3 Gene

GeneCards Summary for OVOL3 Gene

OVOL3 (Ovo-Like Zinc Finger 3) is a Protein Coding gene. GO annotations related to this gene include sequence-specific DNA binding transcription factor activity and nucleic acid binding. An important paralog of this gene is OVOL1.

UniProtKB/Swiss-Prot for OVOL3 Gene

  • May act as a transcription regulator.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OVOL3 Gene

Genomics for OVOL3 Gene

Genomic Location for OVOL3 Gene

Start:
36,111,202 bp from pter
End:
36,113,711 bp from pter
Size:
2,510 bases
Orientation:
Plus strand

Genomic View for OVOL3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for OVOL3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OVOL3 Gene

No data available for Regulatory Elements for OVOL3 Gene

Proteins for OVOL3 Gene

  • Protein details for OVOL3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O00110-OVOL3_HUMAN
    Recommended name:
    Putative transcription factor ovo-like protein 3
    Protein Accession:
    O00110
    Secondary Accessions:

    Protein attributes for OVOL3 Gene

    Size:
    214 amino acids
    Molecular mass:
    23826 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAB51180.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

neXtProt entry for OVOL3 Gene

Proteomics data for OVOL3 Gene at MOPED

Post-translational modifications for OVOL3 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for OVOL3 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for OVOL3 Gene

Domains for OVOL3 Gene

Protein Domains for OVOL3 Gene

Graphical View of Domain Structure for InterPro Entry

O00110

UniProtKB/Swiss-Prot:

OVOL3_HUMAN :
  • O00110
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 4 C2H2-type zinc fingers.
genes like me logo Genes that share domains with OVOL3: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for OVOL3 Gene

Function for OVOL3 Gene

Molecular function for OVOL3 Gene

UniProtKB/Swiss-Prot Function: May act as a transcription regulator.

Gene Ontology (GO) - Molecular Function for OVOL3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding IEA --
GO:0003700 sequence-specific DNA binding transcription factor activity IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with OVOL3: view

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for OVOL3 Gene

Localization for OVOL3 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OVOL3 Gene

Gene Ontology (GO) - Cellular Components for OVOL3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with OVOL3: view

No data available for Subcellular locations from COMPARTMENTS for OVOL3 Gene

Pathways for OVOL3 Gene

SuperPathways for OVOL3 Gene

No Data Available

Interacting Proteins for OVOL3 Gene

Gene Ontology (GO) - Biological Process for OVOL3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with OVOL3: view

No data available for Pathways by source for OVOL3 Gene

Transcripts for OVOL3 Gene

mRNA/cDNA for OVOL3 Gene

(6) REFSEQ mRNAs :
(0) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for OVOL3 Gene

Ovo-like 3 (Drosophila):
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for OVOL3

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for OVOL3 Gene

No ASD Table

Relevant External Links for OVOL3 Gene

GeneLoc Exon Structure for
OVOL3
ECgene alternative splicing isoforms for
OVOL3

Expression for OVOL3 Gene

mRNA expression in normal human tissues for OVOL3 Gene

mRNA differential expression in normal tissues according to GTEx for OVOL3 Gene

This gene is overexpressed in Testis (19.9).

SOURCE GeneReport for Unigene cluster for OVOL3 Gene Hs.143920

genes like me logo Genes that share expressions with OVOL3: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for OVOL3 Gene

Orthologs for OVOL3 Gene

This gene was present in the common ancestor of animals.

Orthologs for OVOL3 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia OVOL3 35
  • 99.84 (n)
  • 100 (a)
OVOL3 36
  • 73 (a)
OneToOne
cow
(Bos Taurus)
Mammalia OVOL3 35
  • 84.66 (n)
  • 82.63 (a)
OVOL3 36
  • 63 (a)
OneToOne
dog
(Canis familiaris)
Mammalia OVOL3 35
  • 84.19 (n)
  • 84.51 (a)
OVOL3 36
  • 80 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ovol3 35
  • 83.78 (n)
  • 88.24 (a)
Ovol3 16
oppossum
(Monodelphis domestica)
Mammalia OVOL3 36
  • 57 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC100912425 35
  • 82.8 (n)
  • 85.64 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC101730693 35
  • 57.83 (n)
  • 59.64 (a)
zebrafish
(Danio rerio)
Actinopterygii OVOL3 36
  • 45 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta ovo 36
  • 7 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea lin-48 36
  • 27 (a)
OneToMany
Species with no ortholog for OVOL3:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for OVOL3 Gene

ENSEMBL:
Gene Tree for OVOL3 (if available)
TreeFam:
Gene Tree for OVOL3 (if available)

Paralogs for OVOL3 Gene

Paralogs for OVOL3 Gene

genes like me logo Genes that share paralogs with OVOL3: view

Variants for OVOL3 Gene

Sequence variations from dbSNP and Humsavar for OVOL3 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs1003470 -- 36,111,827(+) gcaag(C/G)cactg intron-variant
rs2072605 -- 36,112,801(+) GGCCC(A/T)GGGAC synonymous-codon, reference
rs2075472 -- 36,111,195(+) CCTTC(C/T)GGAGG upstream-variant-2KB
rs2075473 -- 36,111,548(+) GCCTC(A/G)GGACC intron-variant
rs4280378 -- 36,111,807(+) AATGT(A/C)ATATA intron-variant

Relevant External Links for OVOL3 Gene

HapMap Linkage Disequilibrium report
OVOL3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for OVOL3 Gene

Disorders for OVOL3 Gene

No disorders were found for OVOL3 Gene.

No data available for UniProtKB/Swiss-Prot for OVOL3 Gene

Publications for OVOL3 Gene

  1. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 3 4
  2. Molecular phylogeny of OVOL genes illustrates a conserved C2H2 zinc finger domain coupled by hypervariable unstructured regions. (PMID: 22737237) Kumar A. … Grapputo A. (PLoS ONE 2012) 3
  3. Ovol2, a mammalian homolog of Drosophila ovo: gene structure, chromosomal mapping, and aberrant expression in blind-sterile mice. (PMID: 12213202) Li B. … Dai X. (Genomics 2002) 3

Products for OVOL3 Gene

Sources for OVOL3 Gene

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