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Aliases for OVOL1-AS1 Gene

Subcategory (RNA class) for OVOL1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for OVOL1-AS1 Gene

  • OVOL1 Antisense RNA 1 2 3 5

External Ids for OVOL1-AS1 Gene

Previous GeneCards Identifiers for OVOL1-AS1 Gene

  • GC11M065562

Summaries for OVOL1-AS1 Gene

GeneCards Summary for OVOL1-AS1 Gene

OVOL1-AS1 (OVOL1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OVOL1-AS1 Gene

Genomics for OVOL1-AS1 Gene

Regulatory Elements for OVOL1-AS1 Gene

Enhancers for OVOL1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F065826 0.8 ENCODE 21.2 -37.0 -37047 3.4 CTCF KLF1 CEBPG ZIC2 RAD21 GLIS2 ZFHX2 FOXK2 ZBTB48 POLR2A SNX32 CTSW OVOL1-AS1 MUS81 CFL1 OVOL1 AP5B1 ENSG00000255404 SART1 SIPA1
GH11F065819 1.2 Ensembl ENCODE 11.9 -31.4 -31361 5.4 HDGF MLX ARID4B DMAP1 YY1 GLIS2 ZNF143 SP3 JUNB REST CTSW MUS81 CFL1 OVOL1-AS1 OVOL1 AP5B1 ENSG00000255404 SART1 SNX32 EFEMP2
GH11F065743 1.2 Ensembl ENCODE 11.7 +46.5 46510 1.6 ATF1 PKNOX1 ARNT SIN3A ZNF2 ZNF143 ZNF207 NFYC REST TBX21 MAP3K11 KAT5 RNASEH2C AP5B1 OVOL1 OVOL1-AS1 ENSG00000255404 BANF1 EIF1AD CST6
GH11F065811 0.9 Ensembl ENCODE 12.4 -21.3 -21339 2.0 PKNOX1 NR2F1 ZNF223 CEBPB EBF1 BCL11B NCOR1 SMARCA4 POLR2A BCL11A SNX32 CTSW MAP3K11 OVOL1-AS1 OVOL1 AP5B1 CFL1 PCNX3 CCDC85B FIBP
GH11F065945 1.1 Ensembl ENCODE 10.1 -154.9 -154942 1.3 HDGF PKNOX1 ATF1 ZNF76 SIN3A RARA ZNF121 SCRT2 SP3 ZBTB11 C11orf68 DRAP1 FOSL1 BANF1 EIF1AD CST6 CTSW EFEMP2 CFL1 MUS81
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OVOL1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for OVOL1-AS1 Gene

Chromosome:
11
Start:
65,789,001 bp from pter
End:
65,790,868 bp from pter
Size:
1,868 bases
Orientation:
Minus strand

Genomic View for OVOL1-AS1 Gene

Genes around OVOL1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OVOL1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OVOL1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OVOL1-AS1 Gene

Proteins for OVOL1-AS1 Gene

Post-translational modifications for OVOL1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OVOL1-AS1 Gene

Domains & Families for OVOL1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OVOL1-AS1 Gene

Function for OVOL1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OVOL1-AS1 Gene

Localization for OVOL1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OVOL1-AS1 Gene

Pathways & Interactions for OVOL1-AS1 Gene

SuperPathways for OVOL1-AS1 Gene

No Data Available

Interacting Proteins for OVOL1-AS1 Gene

Gene Ontology (GO) - Biological Process for OVOL1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OVOL1-AS1 Gene

Transcripts for OVOL1-AS1 Gene

mRNA/cDNA for OVOL1-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OVOL1-AS1 Gene

No ASD Table

Relevant External Links for OVOL1-AS1 Gene

GeneLoc Exon Structure for
OVOL1-AS1
ECgene alternative splicing isoforms for
OVOL1-AS1

Expression for OVOL1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OVOL1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for OVOL1-AS1 Gene

This gene is overexpressed in Testis (x12.6), Skin - Not Sun Exposed (Suprapubic) (x8.3), Skin - Sun Exposed (Lower leg) (x6.4), and Kidney - Cortex (x5.4).
genes like me logo Genes that share expression patterns with OVOL1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for OVOL1-AS1 Gene

Orthologs for OVOL1-AS1 Gene

Evolution for OVOL1-AS1 Gene

ENSEMBL:
Gene Tree for OVOL1-AS1 (if available)
TreeFam:
Gene Tree for OVOL1-AS1 (if available)

No data available for Orthologs for OVOL1-AS1 Gene

Paralogs for OVOL1-AS1 Gene

No data available for Paralogs for OVOL1-AS1 Gene

Variants for OVOL1-AS1 Gene

Sequence variations from dbSNP and Humsavar for OVOL1-AS1 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs10791824 -- 65,791,795(+) TGAGT(A/G)GTCAT intron-variant, upstream-variant-2KB
rs111852579 -- 65,790,823(+) GTCCC(A/G)AGGCG intron-variant, nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs112160949 -- 65,792,669(+) AAAGG(-/T)CCCCC intron-variant, upstream-variant-2KB
rs113207303 -- 65,789,861(+) CCCGA(C/T)AGCAC intron-variant, upstream-variant-2KB
rs11603206 -- 65,788,815(+) AGGGA(A/C)GTGAG intron-variant, downstream-variant-500B, upstream-variant-2KB, utr-variant-5-prime

Relevant External Links for OVOL1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OVOL1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OVOL1-AS1 Gene

Disorders for OVOL1-AS1 Gene

Relevant External Links for OVOL1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
OVOL1-AS1

No disorders were found for OVOL1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OVOL1-AS1 Gene

Publications for OVOL1-AS1 Gene

No publications were found for OVOL1-AS1 Gene.

Products for OVOL1-AS1 Gene

Sources for OVOL1-AS1 Gene

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