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Aliases for OVCH1-AS1 Gene

Subcategory (RNA class) for OVCH1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for OVCH1-AS1 Gene

  • OVCH1 Antisense RNA 1 2 3 5

External Ids for OVCH1-AS1 Gene

Previous GeneCards Identifiers for OVCH1-AS1 Gene

  • GC12P029543

Summaries for OVCH1-AS1 Gene

GeneCards Summary for OVCH1-AS1 Gene

OVCH1-AS1 (OVCH1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OVCH1-AS1 Gene

Genomics for OVCH1-AS1 Gene

Regulatory Elements for OVCH1-AS1 Gene

Enhancers for OVCH1-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around OVCH1-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for OVCH1-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around OVCH1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for OVCH1-AS1 Gene

29,389,294 bp from pter
29,487,488 bp from pter
98,195 bases
Plus strand

Genomic View for OVCH1-AS1 Gene

Genes around OVCH1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OVCH1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OVCH1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OVCH1-AS1 Gene

Proteins for OVCH1-AS1 Gene

Post-translational modifications for OVCH1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OVCH1-AS1 Gene

Domains & Families for OVCH1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OVCH1-AS1 Gene

Function for OVCH1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OVCH1-AS1 Gene

Localization for OVCH1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OVCH1-AS1 Gene

Pathways & Interactions for OVCH1-AS1 Gene

SuperPathways for OVCH1-AS1 Gene

No Data Available

Interacting Proteins for OVCH1-AS1 Gene

Gene Ontology (GO) - Biological Process for OVCH1-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for OVCH1-AS1 Gene

Drugs & Compounds for OVCH1-AS1 Gene

No Compound Related Data Available

Transcripts for OVCH1-AS1 Gene

mRNA/cDNA for OVCH1-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OVCH1-AS1 Gene

No ASD Table

Relevant External Links for OVCH1-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for OVCH1-AS1 Gene

mRNA expression in normal human tissues for OVCH1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for OVCH1-AS1 Gene

This gene is overexpressed in Testis (x17.3) and Whole Blood (x4.6).
genes like me logo Genes that share expression patterns with OVCH1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for OVCH1-AS1 Gene

Orthologs for OVCH1-AS1 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for OVCH1-AS1 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia OVCH1-AS1 36
  • 99 (a)
Species with no ortholog for OVCH1-AS1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OVCH1-AS1 Gene

Gene Tree for OVCH1-AS1 (if available)
Gene Tree for OVCH1-AS1 (if available)

Paralogs for OVCH1-AS1 Gene

genes like me logo Genes that share paralogs with OVCH1-AS1: view

No data available for Paralogs for OVCH1-AS1 Gene

Variants for OVCH1-AS1 Gene

Sequence variations from dbSNP and Humsavar for OVCH1-AS1 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs7138409 -- 29,396,065(+) TGGCT(C/T)ATGCC intron-variant
rs7294371 -- 29,413,816(+) CTTAA(A/T)AAAAT intron-variant
rs7297659 -- 29,420,052(+) TATTT(A/G)ATCAT intron-variant
rs7298472 -- 29,414,745(+) AAAAA(A/T)ATATA intron-variant
rs7300701 -- 29,402,986(+) AACCA(A/G)TTTCA intron-variant

Variation tolerance for OVCH1-AS1 Gene

Gene Damage Index Score: 3.10; 51.01% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Relevant External Links for OVCH1-AS1 Gene

Disorders for OVCH1-AS1 Gene

Relevant External Links for OVCH1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for OVCH1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OVCH1-AS1 Gene

Publications for OVCH1-AS1 Gene

  1. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E. … Simpson A.J.G. (Proc. Natl. Acad. Sci. U.S.A. 2000) 3 67

Products for OVCH1-AS1 Gene

Sources for OVCH1-AS1 Gene