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Aliases for OTUD4P1 Gene

Aliases for OTUD4P1 Gene

  • OTUD4 Pseudogene 1 2 3 5
  • OTU Domain Containing 4 Pseudogene 3
  • HIN1-Like Cysteine Protease 3
  • HIN1L 3

External Ids for OTUD4P1 Gene

Previous GeneCards Identifiers for OTUD4P1 Gene

  • GC12P004477
  • GC12P003878
  • GC12P004364
  • GC12P004689
  • GC12P004852

Summaries for OTUD4P1 Gene

GeneCards Summary for OTUD4P1 Gene

OTUD4P1 (OTUD4 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OTUD4P1 Gene

Genomics for OTUD4P1 Gene

Regulatory Elements for OTUD4P1 Gene

Enhancers for OTUD4P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F004320 0.4 ENCODE 10 +481.9 481853 2.2 PKNOX1 ZFP64 ARID4B SIN3A ZNF2 ZNF143 ZNF207 SP3 NFYC REST OTUD4P1 TIGAR RPS15P7
GH12F003839 0.6 FANTOM5 0.8 -0.1 -144 0.3 ZNF366 PARP11 OTUD4P1 GC12P005172
GH12F003836 0.6 Ensembl 0.8 -2.4 -2359 0.6 CTCF RAD21 OTUD4P1 GC12P005172
GH12F003832 0.8 Ensembl ENCODE 0.4 -5.9 -5914 1.3 CTCF SOX5 SAP130 FOXA3 TEAD3 PARP11 OTUD4P1 GC12P005172
GH12F003821 0.6 ENCODE 0.3 -17.6 -17554 0.8 GATA3 RNU6-174P OTUD4P1 GC12P005172
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around OTUD4P1 on UCSC Golden Path with GeneCards custom track

Promoters for OTUD4P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001774367 -359 1000 ZNF366

Genomic Location for OTUD4P1 Gene

Chromosome:
12
Start:
3,839,459 bp from pter
End:
3,846,276 bp from pter
Size:
6,818 bases
Orientation:
Plus strand

Genomic View for OTUD4P1 Gene

Genes around OTUD4P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OTUD4P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OTUD4P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OTUD4P1 Gene

Proteins for OTUD4P1 Gene

Post-translational modifications for OTUD4P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OTUD4P1 Gene

Domains & Families for OTUD4P1 Gene

Suggested Antigen Peptide Sequences for OTUD4P1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for OTUD4P1 Gene

Function for OTUD4P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OTUD4P1 Gene

Localization for OTUD4P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OTUD4P1 Gene

Pathways & Interactions for OTUD4P1 Gene

SuperPathways for OTUD4P1 Gene

No Data Available

Interacting Proteins for OTUD4P1 Gene

Gene Ontology (GO) - Biological Process for OTUD4P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OTUD4P1 Gene

Transcripts for OTUD4P1 Gene

mRNA/cDNA for OTUD4P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OTUD4P1 Gene

No ASD Table

Relevant External Links for OTUD4P1 Gene

GeneLoc Exon Structure for
OTUD4P1
ECgene alternative splicing isoforms for
OTUD4P1

Expression for OTUD4P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OTUD4P1 Gene

mRNA differential expression in normal tissues according to GTEx for OTUD4P1 Gene

This gene is overexpressed in Testis (x8.4).

Protein differential expression in normal tissues from HIPED for OTUD4P1 Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for OTUD4P1 Gene



Protein tissue co-expression partners for OTUD4P1 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of OTUD4P1 Gene:

OTUD4P1
genes like me logo Genes that share expression patterns with OTUD4P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for OTUD4P1 Gene

Orthologs for OTUD4P1 Gene

Evolution for OTUD4P1 Gene

ENSEMBL:
Gene Tree for OTUD4P1 (if available)
TreeFam:
Gene Tree for OTUD4P1 (if available)

No data available for Orthologs for OTUD4P1 Gene

Paralogs for OTUD4P1 Gene

No data available for Paralogs for OTUD4P1 Gene

Variants for OTUD4P1 Gene

Relevant External Links for OTUD4P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OTUD4P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OTUD4P1 Gene

Disorders for OTUD4P1 Gene

No disorders were found for OTUD4P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OTUD4P1 Gene

Publications for OTUD4P1 Gene

  1. Importin 8 is a gene silencing factor that targets argonaute proteins to distinct mRNAs. (PMID: 19167051) Weinmann L. … Meister G. (Cell 2009) 3 64
  2. The finished DNA sequence of human chromosome 12. (PMID: 16541075) Scherer S.E. … Gibbs R.A. (Nature 2006) 3 64
  3. Human and mouse proteases: a comparative genomic approach. (PMID: 12838346) Puente X.S. … Lopez-Otin C. (Nat. Rev. Genet. 2003) 3 64

Products for OTUD4P1 Gene

Sources for OTUD4P1 Gene

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