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Aliases for OSTN-AS1 Gene

Subcategory (RNA class) for OSTN-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for OSTN-AS1 Gene

  • OSTN Antisense RNA 1 2 3 5
  • OSTN Antisense RNA 1 (Non-Protein Coding) 2

External Ids for OSTN-AS1 Gene

Previous GeneCards Identifiers for OSTN-AS1 Gene

  • GC00U933946
  • GC03M190932

Summaries for OSTN-AS1 Gene

GeneCards Summary for OSTN-AS1 Gene

OSTN-AS1 (OSTN Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for OSTN-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OSTN-AS1 Gene

Genomics for OSTN-AS1 Gene

Regulatory Elements for OSTN-AS1 Gene

Enhancers for OSTN-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H191295 0.9 ENCODE 10.9 -61.7 -61735 1 HDGF PKNOX1 TBL1XR1 ZSCAN4 BMI1 YBX1 BATF ZNF207 ATF7 ETV6 CCDC50 UTS2B OSTN-AS1
GH03H191300 0.9 FANTOM5 ENCODE 10.9 -66.3 -66319 1 ELF1 ZNF217 IKZF1 EED ETV6 IKZF2 RUNX3 SPI1 CCDC50 UTS2B OSTN-AS1
GH03H191237 1.3 FANTOM5 Ensembl ENCODE 7 -4.3 -4259 2 ELF3 SOX13 ESRRA FOXA2 NFIB HIC1 GATA3 MAFK HOMEZ MIXL1 CCDC50 UTS2B OSTN-AS1
GH03H191245 1.1 Ensembl ENCODE 6.8 -11.7 -11682 1 INSM2 BRCA1 ZNF366 ATF7 FOS ETV6 RUNX3 IKZF2 NFYA CEBPB CCDC50 UTS2B OSTN-AS1
GH03H191258 0.4 Ensembl 11.4 -24.5 -24496 0 ZSCAN29 UTS2B OSTN-AS1 CCDC50
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OSTN-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for OSTN-AS1 Gene

Chromosome:
3
Start:
191,213,291 bp from pter
End:
191,234,605 bp from pter
Size:
21,315 bases
Orientation:
Minus strand

Genomic View for OSTN-AS1 Gene

Genes around OSTN-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OSTN-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OSTN-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OSTN-AS1 Gene

Proteins for OSTN-AS1 Gene

Post-translational modifications for OSTN-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OSTN-AS1 Gene

Domains & Families for OSTN-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OSTN-AS1 Gene

Function for OSTN-AS1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for OSTN-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OSTN-AS1 Gene

Localization for OSTN-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OSTN-AS1 Gene

Pathways & Interactions for OSTN-AS1 Gene

SuperPathways for OSTN-AS1 Gene

No Data Available

Interacting Proteins for OSTN-AS1 Gene

Gene Ontology (GO) - Biological Process for OSTN-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OSTN-AS1 Gene

Drugs & Compounds for OSTN-AS1 Gene

No Compound Related Data Available

Transcripts for OSTN-AS1 Gene

mRNA/cDNA for OSTN-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for OSTN-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for OSTN-AS1 Gene

No ASD Table

Relevant External Links for OSTN-AS1 Gene

GeneLoc Exon Structure for
OSTN-AS1
ECgene alternative splicing isoforms for
OSTN-AS1

Expression for OSTN-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OSTN-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for OSTN-AS1 Gene

This gene is overexpressed in Small Intestine - Terminal Ileum (x4.0).
genes like me logo Genes that share expression patterns with OSTN-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OSTN-AS1 Gene

Orthologs for OSTN-AS1 Gene

Evolution for OSTN-AS1 Gene

ENSEMBL:
Gene Tree for OSTN-AS1 (if available)
TreeFam:
Gene Tree for OSTN-AS1 (if available)

No data available for Orthologs for OSTN-AS1 Gene

Paralogs for OSTN-AS1 Gene

No data available for Paralogs for OSTN-AS1 Gene

Variants for OSTN-AS1 Gene

Sequence variations from dbSNP and Humsavar for OSTN-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000031781 -- 191,218,191(+) TGATC(C/T)GTAAA intron-variant
rs1000161186 -- 191,235,664(+) ACTCT(A/C)TCATC intron-variant, upstream-variant-2KB
rs1000300609 -- 191,217,673(+) CAAAG(C/T)GGCAA intron-variant
rs1000473532 -- 191,235,179(+) AAGGC(A/G)GGTAT intron-variant, upstream-variant-2KB
rs1000525804 -- 191,235,473(+) CAAAG(A/T)CTTAC intron-variant, upstream-variant-2KB

Relevant External Links for OSTN-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OSTN-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OSTN-AS1 Gene

Disorders for OSTN-AS1 Gene

Relevant External Links for OSTN-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
OSTN-AS1

No disorders were found for OSTN-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OSTN-AS1 Gene

Publications for OSTN-AS1 Gene

No publications were found for OSTN-AS1 Gene.

Products for OSTN-AS1 Gene

Sources for OSTN-AS1 Gene

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