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Aliases for OSTN-AS1 Gene

Subcategory (RNA class) for OSTN-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for OSTN-AS1 Gene

  • OSTN Antisense RNA 1 2 3 5
  • OSTN Antisense RNA 1 (Non-Protein Coding) 2

External Ids for OSTN-AS1 Gene

Previous GeneCards Identifiers for OSTN-AS1 Gene

  • GC00U933946
  • GC03M190932

Summaries for OSTN-AS1 Gene

GeneCards Summary for OSTN-AS1 Gene

OSTN-AS1 (OSTN Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for OSTN-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OSTN-AS1 Gene

Genomics for OSTN-AS1 Gene

GeneHancer (GH) Regulatory Elements for OSTN-AS1 Gene

Promoters and enhancers for OSTN-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I191235 Enhancer 0.7 ENCODE 550.8 -1.2 -1162 0.2 PKNOX1 SMAD1 EBF1 BMI1 BATF IRF4 RELA ZFHX2 ATF7 ETV6 OSTN-AS1 UTS2B CCDC50 OSTN
GH03I191295 Enhancer 0.8 ENCODE 10.9 -61.7 -61735 1.5 HDGF PKNOX1 SMAD1 ZSCAN4 BMI1 YBX1 BATF IRF4 ZNF207 ATF7 CCDC50 UTS2B OSTN-AS1
GH03I191300 Enhancer 0.8 FANTOM5 ENCODE 10.9 -66.3 -66319 1.1 ELF1 ATF2 ZNF217 IKZF1 ZBTB33 ETV6 RUNX3 IKZF2 SPI1 CCDC50 UTS2B OSTN-AS1
GH03I191237 Enhancer 1.1 FANTOM5 Ensembl ENCODE 7 -4.3 -4258 2.3 ELF3 SOX13 ESRRA FOXA2 NFIB HIC1 GATA3 HOMEZ MAFK MIXL1 UTS2B CCDC50 OSTN-AS1 OSTN
GH03I191245 Enhancer 1 Ensembl ENCODE 6.8 -11.7 -11682 1.4 INSM2 MZF1 BRCA1 ZNF366 ATF7 ETV6 FOS IKZF2 RUNX3 NFYA CCDC50 UTS2B OSTN-AS1 OSTN
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around OSTN-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for OSTN-AS1 Gene

Genomic Locations for OSTN-AS1 Gene
chr3:191,213,291-191,234,605
(GRCh38/hg38)
Size:
21,315 bases
Orientation:
Minus strand
chr3:190,931,080-190,952,394
(GRCh37/hg19)

Genomic View for OSTN-AS1 Gene

Genes around OSTN-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OSTN-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OSTN-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OSTN-AS1 Gene

Proteins for OSTN-AS1 Gene

Post-translational modifications for OSTN-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OSTN-AS1 Gene

Domains & Families for OSTN-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OSTN-AS1 Gene

Function for OSTN-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OSTN-AS1 Gene

Localization for OSTN-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OSTN-AS1 Gene

Pathways & Interactions for OSTN-AS1 Gene

SuperPathways for OSTN-AS1 Gene

No Data Available

Interacting Proteins for OSTN-AS1 Gene

Gene Ontology (GO) - Biological Process for OSTN-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OSTN-AS1 Gene

Drugs & Compounds for OSTN-AS1 Gene

No Compound Related Data Available

Transcripts for OSTN-AS1 Gene

mRNA/cDNA for OSTN-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for OSTN-AS1 Gene

No ASD Table

Relevant External Links for OSTN-AS1 Gene

GeneLoc Exon Structure for
OSTN-AS1
ECgene alternative splicing isoforms for
OSTN-AS1

Expression for OSTN-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OSTN-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for OSTN-AS1 Gene

This gene is overexpressed in Small Intestine - Terminal Ileum (x4.0).
genes like me logo Genes that share expression patterns with OSTN-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OSTN-AS1 Gene

Orthologs for OSTN-AS1 Gene

Evolution for OSTN-AS1 Gene

ENSEMBL:
Gene Tree for OSTN-AS1 (if available)
TreeFam:
Gene Tree for OSTN-AS1 (if available)

No data available for Orthologs for OSTN-AS1 Gene

Paralogs for OSTN-AS1 Gene

No data available for Paralogs for OSTN-AS1 Gene

Variants for OSTN-AS1 Gene

Sequence variations from dbSNP and Humsavar for OSTN-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000031781 -- 191,218,191(-) C/T intron_variant
rs1000161186 -- 191,235,664(-) C/A upstream_transcript_variant
rs1000300609 -- 191,217,673(-) T/C intron_variant
rs1000473532 -- 191,235,179(-) A/G upstream_transcript_variant
rs1000525804 -- 191,235,473(-) T/A upstream_transcript_variant

Additional Variant Information for OSTN-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OSTN-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OSTN-AS1 Gene

Disorders for OSTN-AS1 Gene

Additional Disease Information for OSTN-AS1

No disorders were found for OSTN-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OSTN-AS1 Gene

Publications for OSTN-AS1 Gene

No publications were found for OSTN-AS1 Gene.

Products for OSTN-AS1 Gene

Sources for OSTN-AS1 Gene

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