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Aliases for OSTCP1 Gene

Aliases for OSTCP1 Gene

  • Oligosaccharyltransferase Complex Subunit Pseudogene 1 2 3
  • Oligosaccharyltransferase Complex Subunit-Like 2
  • DC2 Protein-Like 2
  • OSTCL 3
  • DC2L 3

External Ids for OSTCP1 Gene

Previous HGNC Symbols for OSTCP1 Gene

  • OSTCL

Previous GeneCards Identifiers for OSTCP1 Gene

  • GC06M159265

Summaries for OSTCP1 Gene

GeneCards Summary for OSTCP1 Gene

OSTCP1 (Oligosaccharyltransferase Complex Subunit Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OSTCP1 Gene

Genomics for OSTCP1 Gene

Genomic Location for OSTCP1 Gene

Chromosome:
6
Start:
158,841,117 bp from pter
End:
158,857,632 bp from pter
Size:
16,516 bases
Orientation:
Minus strand

Genomic View for OSTCP1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for OSTCP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OSTCP1 Gene

No data available for Regulatory Elements for OSTCP1 Gene

Proteins for OSTCP1 Gene

Post-translational modifications for OSTCP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OSTCP1 Gene

Domains & Families for OSTCP1 Gene

Suggested Antigen Peptide Sequences for OSTCP1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for OSTCP1 Gene

Function for OSTCP1 Gene

Phenotypes for OSTCP1 Gene

genes like me logo Genes that share phenotypes with OSTCP1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OSTCP1 Gene

Localization for OSTCP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OSTCP1 Gene

Pathways & Interactions for OSTCP1 Gene

SuperPathways for OSTCP1 Gene

No Data Available

Interacting Proteins for OSTCP1 Gene

Gene Ontology (GO) - Biological Process for OSTCP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OSTCP1 Gene

Drugs & Compounds for OSTCP1 Gene

No Compound Related Data Available

Transcripts for OSTCP1 Gene

mRNA/cDNA for OSTCP1 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(3) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for OSTCP1 Gene

Oligosaccharyltransferase complex subunit pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for OSTCP1 Gene

No ASD Table

Relevant External Links for OSTCP1 Gene

GeneLoc Exon Structure for
OSTCP1
ECgene alternative splicing isoforms for
OSTCP1

Expression for OSTCP1 Gene

mRNA expression in normal human tissues for OSTCP1 Gene

SOURCE GeneReport for Unigene cluster for OSTCP1 Gene Hs.487035

genes like me logo Genes that share expression patterns with OSTCP1: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for OSTCP1 Gene

Orthologs for OSTCP1 Gene

Evolution for OSTCP1 Gene

ENSEMBL:
Gene Tree for OSTCP1 (if available)
TreeFam:
Gene Tree for OSTCP1 (if available)

No data available for Orthologs for OSTCP1 Gene

Paralogs for OSTCP1 Gene

No data available for Paralogs for OSTCP1 Gene

Variants for OSTCP1 Gene

Sequence variations from dbSNP and Humsavar for OSTCP1 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs34650186 -- 158,847,466(+) TTTTT(-/T)CAGAT intron-variant
rs35344981 -- 158,841,374(+) ACTTT(-/T)ATTTG nc-transcript-variant
rs35361208 -- 158,855,315(+) AGCAA(-/T)TTTTT intron-variant
rs36113022 -- 158,851,465(+) GGCAT(C/G)TGCCA intron-variant
rs55807210 -- 158,851,315(+) TTATT(-/TATT/TATTT/TATTTATT/TATTTATTTATT/TATTTATTTATTTATT)ATTTT intron-variant

Relevant External Links for OSTCP1 Gene

HapMap Linkage Disequilibrium report
OSTCP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OSTCP1 Gene

Disorders for OSTCP1 Gene

Relevant External Links for OSTCP1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
OSTCP1
genes like me logo Genes that share disorders with OSTCP1: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OSTCP1 Gene

Publications for OSTCP1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 67
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 67
  3. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 67
  4. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 67

Products for OSTCP1 Gene

Sources for OSTCP1 Gene

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