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Aliases for OSTCP1 Gene

Aliases for OSTCP1 Gene

  • Oligosaccharyltransferase Complex Subunit Pseudogene 1 2 3
  • Oligosaccharyltransferase Complex Subunit-Like 2
  • DC2 Protein-Like 2
  • OSTCL 3
  • DC2L 3

External Ids for OSTCP1 Gene

Previous Symbols for OSTCP1 Gene

  • OSTCL

Summaries for OSTCP1 Gene

GeneCards Summary for OSTCP1 Gene

OSTCP1 (Oligosaccharyltransferase Complex Subunit Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OSTCP1 Gene

Genomics for OSTCP1 Gene

Genomic Location for OSTCP1 Gene

Start:
158,841,117 bp from pter
End:
158,857,632 bp from pter
Size:
16,516 bases
Orientation:
Minus strand

Genomic View for OSTCP1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for OSTCP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OSTCP1 Gene

No data available for Regulatory Elements for OSTCP1 Gene

Proteins for OSTCP1 Gene

Post-translational modifications for OSTCP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OSTCP1 Gene

Domains for OSTCP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OSTCP1 Gene

Function for OSTCP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for OSTCP1 Gene

Localization for OSTCP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OSTCP1 Gene

Pathways for OSTCP1 Gene

SuperPathways for OSTCP1 Gene

No Data Available

Interacting Proteins for OSTCP1 Gene

Gene Ontology (GO) - Biological Process for OSTCP1 Gene

None

No data available for Pathways by source for OSTCP1 Gene

Transcripts for OSTCP1 Gene

mRNA/cDNA for OSTCP1 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(3) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for OSTCP1 Gene

Oligosaccharyltransferase complex subunit pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for OSTCP1 Gene

No ASD Table

Relevant External Links for OSTCP1 Gene

GeneLoc Exon Structure for
OSTCP1
ECgene alternative splicing isoforms for
OSTCP1

Expression for OSTCP1 Gene

mRNA expression in normal human tissues for OSTCP1 Gene

SOURCE GeneReport for Unigene cluster for OSTCP1 Gene Hs.487035

genes like me logo Genes that share expressions with OSTCP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for OSTCP1 Gene

Orthologs for OSTCP1 Gene

Evolution for OSTCP1 Gene

ENSEMBL:
Gene Tree for OSTCP1 (if available)
TreeFam:
Gene Tree for OSTCP1 (if available)

No data available for Orthologs for OSTCP1 Gene

Paralogs for OSTCP1 Gene

No data available for Paralogs for OSTCP1 Gene

Variants for OSTCP1 Gene

Sequence variations from dbSNP and Humsavar for OSTCP1 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs1994351 -- 158,849,618(+) GAATG(C/T)TGTCA intron-variant
rs2129210 -- 158,849,771(+) TCTAA(C/T)TGTGG intron-variant
rs2129211 -- 158,849,913(+) CTTCT(A/G)TAGAC intron-variant
rs2361472 -- 158,847,228(+) ttagg(G/T)tttcg intron-variant
rs2361473 -- 158,847,553(+) aagca(A/G)ttctc intron-variant

Relevant External Links for OSTCP1 Gene

HapMap Linkage Disequilibrium report
OSTCP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for OSTCP1 Gene

Disorders for OSTCP1 Gene

No disorders were found for OSTCP1 Gene.

No data available for UniProtKB/Swiss-Prot for OSTCP1 Gene

Publications for OSTCP1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  3. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3
  4. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3

Products for OSTCP1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate OSTCP1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for OSTCP1
    • Block miRNA regulation of OSTCP1 using miScript Target Protectors

    Sources for OSTCP1 Gene

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