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Aliases for OSGEPL1-AS1 Gene

Subcategory (RNA class) for OSGEPL1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for OSGEPL1-AS1 Gene

  • OSGEPL1 Antisense RNA 1 2 3 5
  • OSGEPL1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for OSGEPL1-AS1 Gene

Previous GeneCards Identifiers for OSGEPL1-AS1 Gene

  • GC02P190628

Summaries for OSGEPL1-AS1 Gene

GeneCards Summary for OSGEPL1-AS1 Gene

OSGEPL1-AS1 (OSGEPL1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OSGEPL1-AS1 Gene

Genomics for OSGEPL1-AS1 Gene

Regulatory Elements for OSGEPL1-AS1 Gene

Enhancers for OSGEPL1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F189611 1.5 FANTOM5 Ensembl ENCODE 12.3 -149.2 -149192 3.5 PKNOX1 ATF1 YY1 GATA2 NCOA1 SMARCB1 MEF2D MAFF SMARCA4 PBX2 OSGEPL1-AS1 HIBCH ENSG00000276828 SLC40A1
GH02F189782 1.2 ENCODE 12.3 +21.3 21323 3.6 HDGF PKNOX1 CREB3L1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ORMDL1 HNRNPCP2 OSGEPL1-AS1 OSGEPL1 WDR75 NEMP2 ASNSD1 PMS1 ENSG00000273240
GH02F189275 0.9 Ensembl ENCODE 12 -486.3 -486338 1.6 JUN CEBPB CEBPG NR3C1 EP300 JUND ZNF585B CBX5 ZBTB33 FOS COL5A2 OSGEPL1-AS1 OSGEPL1 WDR75 KRT18P19
GH02F189149 0.7 ENCODE 12 -610.7 -610663 5.0 PKNOX1 CEBPB DPF2 ZNF217 ZNF791 JUND ZNF707 GATA3 ZNF366 ZNF585B WDR75 COL5A2 OSGEPL1-AS1 OSGEPL1 MIR3129 GC02M189179 GC02M189180
GH02F190537 0.6 ENCODE 12 +775.3 775286 0.2 RFX1 BMI1 REST UBTF SP1 ZNF585B SETDB1 SPI1 NAB1 OSGEPL1-AS1 OSGEPL1 ENSG00000233654 NEMP2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OSGEPL1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for OSGEPL1-AS1 Gene

Chromosome:
2
Start:
189,762,704 bp from pter
End:
189,765,556 bp from pter
Size:
2,853 bases
Orientation:
Plus strand

Genomic View for OSGEPL1-AS1 Gene

Genes around OSGEPL1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OSGEPL1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OSGEPL1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OSGEPL1-AS1 Gene

Proteins for OSGEPL1-AS1 Gene

Post-translational modifications for OSGEPL1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OSGEPL1-AS1 Gene

Domains & Families for OSGEPL1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OSGEPL1-AS1 Gene

Function for OSGEPL1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OSGEPL1-AS1 Gene

Localization for OSGEPL1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OSGEPL1-AS1 Gene

Pathways & Interactions for OSGEPL1-AS1 Gene

SuperPathways for OSGEPL1-AS1 Gene

No Data Available

Interacting Proteins for OSGEPL1-AS1 Gene

Gene Ontology (GO) - Biological Process for OSGEPL1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OSGEPL1-AS1 Gene

Transcripts for OSGEPL1-AS1 Gene

mRNA/cDNA for OSGEPL1-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OSGEPL1-AS1 Gene

No ASD Table

Relevant External Links for OSGEPL1-AS1 Gene

GeneLoc Exon Structure for
OSGEPL1-AS1
ECgene alternative splicing isoforms for
OSGEPL1-AS1

Expression for OSGEPL1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OSGEPL1-AS1 Gene

genes like me logo Genes that share expression patterns with OSGEPL1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for OSGEPL1-AS1 Gene

Orthologs for OSGEPL1-AS1 Gene

Evolution for OSGEPL1-AS1 Gene

ENSEMBL:
Gene Tree for OSGEPL1-AS1 (if available)
TreeFam:
Gene Tree for OSGEPL1-AS1 (if available)

No data available for Orthologs for OSGEPL1-AS1 Gene

Paralogs for OSGEPL1-AS1 Gene

No data available for Paralogs for OSGEPL1-AS1 Gene

Variants for OSGEPL1-AS1 Gene

Sequence variations from dbSNP and Humsavar for OSGEPL1-AS1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs10668312 -- 189,761,029(+) TATTA(-/TTAT)TTATT intron-variant, upstream-variant-2KB
rs10696028 -- 189,761,036(+) ATTTA(-/TTTA)AGTAC intron-variant, upstream-variant-2KB
rs10931433 -- 189,764,968(+) GCTGG(A/G)ACTAC nc-transcript-variant, upstream-variant-2KB
rs112037946 -- 189,765,884(+) GCAAT(G/T)GGTGT downstream-variant-500B
rs112085300 -- 189,762,944(+) AGAGT(G/T)CTGTA nc-transcript-variant, downstream-variant-500B, upstream-variant-2KB, utr-variant-3-prime, utr-variant-5-prime

Relevant External Links for OSGEPL1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OSGEPL1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OSGEPL1-AS1 Gene

Disorders for OSGEPL1-AS1 Gene

Relevant External Links for OSGEPL1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
OSGEPL1-AS1

No disorders were found for OSGEPL1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OSGEPL1-AS1 Gene

Publications for OSGEPL1-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64

Products for OSGEPL1-AS1 Gene

Sources for OSGEPL1-AS1 Gene

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