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Aliases for OSGEPL1-AS1 Gene

Subcategory (RNA class) for OSGEPL1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for OSGEPL1-AS1 Gene

  • OSGEPL1 Antisense RNA 1 2 3 5
  • OSGEPL1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for OSGEPL1-AS1 Gene

Previous GeneCards Identifiers for OSGEPL1-AS1 Gene

  • GC02P190628

Summaries for OSGEPL1-AS1 Gene

GeneCards Summary for OSGEPL1-AS1 Gene

OSGEPL1-AS1 (OSGEPL1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for OSGEPL1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OSGEPL1-AS1 Gene

Genomics for OSGEPL1-AS1 Gene

Regulatory Elements for OSGEPL1-AS1 Gene

Enhancers for OSGEPL1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H189611 1.5 FANTOM5 Ensembl ENCODE 12.3 -149.2 -149192 3 PKNOX1 FOXA2 ATF1 YY1 TCF12 GATA2 ATF7 NCOA1 REST SMARCB1 OSGEPL1-AS1 HIBCH ENSG00000276828 SLC40A1
GH02H189782 1.1 ENCODE 12.3 +21.3 21323 3 HDGF PKNOX1 FOXA2 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B ORMDL1 PMS1 ANKAR HNRNPCP2 OSGEPL1-AS1 OSGEPL1 WDR75 NEMP2 ASNSD1 ENSG00000273240
GH02H190537 0.6 ENCODE 12 +775.3 775286 0 SP1 RFX1 ZNF585B FOXJ2 BMI1 SETDB1 SPI1 NAB1 PMS1 OSGEPL1-AS1 OSGEPL1 ENSG00000233654 NEMP2
GH02H189426 0.4 ENCODE 12 -335.7 -335655 0 ZNF585B PMS1 OSGEPL1-AS1 WDR75 OSGEPL1 LOC101927252 KRT18P19
GH02H189791 0.2 ENCODE 12.3 +29.0 28989 1 OSGEPL1 OSGEPL1-AS1 ANKAR SLC40A1 ORMDL1 LOC100421409
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OSGEPL1-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for OSGEPL1-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000127793 96 2001 PKNOX1 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9

Genomic Location for OSGEPL1-AS1 Gene

Chromosome:
2
Start:
189,762,704 bp from pter
End:
189,765,556 bp from pter
Size:
2,853 bases
Orientation:
Plus strand

Genomic View for OSGEPL1-AS1 Gene

Genes around OSGEPL1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OSGEPL1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OSGEPL1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OSGEPL1-AS1 Gene

Proteins for OSGEPL1-AS1 Gene

Post-translational modifications for OSGEPL1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OSGEPL1-AS1 Gene

Domains & Families for OSGEPL1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OSGEPL1-AS1 Gene

Function for OSGEPL1-AS1 Gene

Phenotypes From GWAS Catalog for OSGEPL1-AS1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for OSGEPL1-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OSGEPL1-AS1 Gene

Localization for OSGEPL1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OSGEPL1-AS1 Gene

Pathways & Interactions for OSGEPL1-AS1 Gene

SuperPathways for OSGEPL1-AS1 Gene

No Data Available

Interacting Proteins for OSGEPL1-AS1 Gene

Gene Ontology (GO) - Biological Process for OSGEPL1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OSGEPL1-AS1 Gene

Drugs & Compounds for OSGEPL1-AS1 Gene

No Compound Related Data Available

Transcripts for OSGEPL1-AS1 Gene

mRNA/cDNA for OSGEPL1-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for OSGEPL1-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for OSGEPL1-AS1 Gene

No ASD Table

Relevant External Links for OSGEPL1-AS1 Gene

GeneLoc Exon Structure for
OSGEPL1-AS1
ECgene alternative splicing isoforms for
OSGEPL1-AS1

Expression for OSGEPL1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OSGEPL1-AS1 Gene

genes like me logo Genes that share expression patterns with OSGEPL1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OSGEPL1-AS1 Gene

Orthologs for OSGEPL1-AS1 Gene

Evolution for OSGEPL1-AS1 Gene

ENSEMBL:
Gene Tree for OSGEPL1-AS1 (if available)
TreeFam:
Gene Tree for OSGEPL1-AS1 (if available)

No data available for Orthologs for OSGEPL1-AS1 Gene

Paralogs for OSGEPL1-AS1 Gene

No data available for Paralogs for OSGEPL1-AS1 Gene

Variants for OSGEPL1-AS1 Gene

Sequence variations from dbSNP and Humsavar for OSGEPL1-AS1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000017156 -- 189,762,886(+) TCTTT(A/G/T)CCCAA nc-transcript-variant, downstream-variant-500B, upstream-variant-2KB, utr-variant-3-prime, utr-variant-5-prime
rs1001692537 -- 189,761,927(+) GCTAA(C/T)ATAAA intron-variant, upstream-variant-2KB
rs1001856421 -- 189,763,166(+) GTACC(G/T)GATAC intron-variant, downstream-variant-500B, upstream-variant-2KB, utr-variant-5-prime
rs1002794350 -- 189,764,914(+) TACAA(C/T)CTCCA nc-transcript-variant, upstream-variant-2KB
rs1002947195 -- 189,764,727(+) CTGAA(A/T)CTAGA intron-variant, upstream-variant-2KB

Relevant External Links for OSGEPL1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OSGEPL1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OSGEPL1-AS1 Gene

Disorders for OSGEPL1-AS1 Gene

Relevant External Links for OSGEPL1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
OSGEPL1-AS1

No disorders were found for OSGEPL1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OSGEPL1-AS1 Gene

Publications for OSGEPL1-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60

Products for OSGEPL1-AS1 Gene

Sources for OSGEPL1-AS1 Gene

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