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Aliases for OSBPL10-AS1 Gene

Subcategory (RNA class) for OSBPL10-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for OSBPL10-AS1 Gene

  • OSBPL10 Antisense RNA 1 2 3 5
  • OSBPL10 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for OSBPL10-AS1 Gene

Previous GeneCards Identifiers for OSBPL10-AS1 Gene

  • GC00U933561

Summaries for OSBPL10-AS1 Gene

GeneCards Summary for OSBPL10-AS1 Gene

OSBPL10-AS1 (OSBPL10 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OSBPL10-AS1 Gene

Genomics for OSBPL10-AS1 Gene

Regulatory Elements for OSBPL10-AS1 Gene

Enhancers for OSBPL10-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F031704 0.9 Ensembl ENCODE 17.8 +0.8 759 1.6 CTCF MNT RAD21 JUND KLF9 FOSL2 FOS NFE2L2 OSBPL10-AS1 ZNF587P1
GH03F031944 1.2 Ensembl ENCODE 9.9 +242.9 242928 5.0 ELF3 MLX ARID4B DMAP1 THRB RAD21 RARA SLC30A9 CREM MIXL1 OSBPL10 ZNF860 OSBPL10-AS1 GC03P031801 GC03P031803 GC03P031804 PIR35964
GH03F031875 0.9 Ensembl ENCODE 10.4 +172.6 172624 1.5 GATAD2A JUN CEBPB ZMYM3 ZNF384 EP300 KAT2B GATA3 RCOR2 FOS OSBPL10-AS1 OSBPL10 GC03P031801 GC03P031803 GC03P031804 PIR35964 ZNF860
GH03F031724 0.7 ENCODE 12.4 +20.5 20466 0.9 CTCF ATF1 ZNF687 PKNOX1 MNT RAD21 GATA3 CTBP1 ZNF24 CREM OSBPL10-AS1 OSBPL10 ZNF587P1
GH03F031755 0.5 Ensembl ENCODE 15.5 +52.0 52044 0.6 OSBPL10-AS1 OSBPL10 ZNF587P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OSBPL10-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for OSBPL10-AS1 Gene

Chromosome:
3
Start:
31,704,058 bp from pter
End:
31,721,652 bp from pter
Size:
17,595 bases
Orientation:
Plus strand

Genomic View for OSBPL10-AS1 Gene

Genes around OSBPL10-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OSBPL10-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OSBPL10-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OSBPL10-AS1 Gene

Proteins for OSBPL10-AS1 Gene

Post-translational modifications for OSBPL10-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OSBPL10-AS1 Gene

Domains & Families for OSBPL10-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OSBPL10-AS1 Gene

Function for OSBPL10-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OSBPL10-AS1 Gene

Localization for OSBPL10-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OSBPL10-AS1 Gene

Pathways & Interactions for OSBPL10-AS1 Gene

SuperPathways for OSBPL10-AS1 Gene

No Data Available

Interacting Proteins for OSBPL10-AS1 Gene

Gene Ontology (GO) - Biological Process for OSBPL10-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OSBPL10-AS1 Gene

Transcripts for OSBPL10-AS1 Gene

mRNA/cDNA for OSBPL10-AS1 Gene

(1) Additional mRNA sequences :
(8) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for OSBPL10-AS1 Gene

OSBPL10 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for OSBPL10-AS1 Gene

No ASD Table

Relevant External Links for OSBPL10-AS1 Gene

GeneLoc Exon Structure for
OSBPL10-AS1
ECgene alternative splicing isoforms for
OSBPL10-AS1

Expression for OSBPL10-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OSBPL10-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for OSBPL10-AS1 Gene

This gene is overexpressed in Testis (x42.1).

SOURCE GeneReport for Unigene cluster for OSBPL10-AS1 Gene:

Hs.662428
genes like me logo Genes that share expression patterns with OSBPL10-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for OSBPL10-AS1 Gene

Orthologs for OSBPL10-AS1 Gene

Evolution for OSBPL10-AS1 Gene

ENSEMBL:
Gene Tree for OSBPL10-AS1 (if available)
TreeFam:
Gene Tree for OSBPL10-AS1 (if available)

No data available for Orthologs for OSBPL10-AS1 Gene

Paralogs for OSBPL10-AS1 Gene

No data available for Paralogs for OSBPL10-AS1 Gene

Variants for OSBPL10-AS1 Gene

Sequence variations from dbSNP and Humsavar for OSBPL10-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs10628664 -- 31,720,045(+) AGAAC(-/AT)ATATA intron-variant
rs10865835 -- 31,717,385(+) TTATT(C/G)TTTTT intron-variant
rs11129458 -- 31,711,115(+) TTCAA(A/C)CATGT intron-variant, upstream-variant-2KB
rs111322383 -- 31,721,223(+) AGAGC(A/G/T)TTCAG intron-variant
rs111397477 -- 31,704,904(+) GATAC(A/G/T)GAGTA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for OSBPL10-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv590033 CNV loss 21841781
nsv460485 CNV loss 19166990
nsv1003285 CNV gain 25217958

Relevant External Links for OSBPL10-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OSBPL10-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for OSBPL10-AS1 Gene

Disorders for OSBPL10-AS1 Gene

Relevant External Links for OSBPL10-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
OSBPL10-AS1

No disorders were found for OSBPL10-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OSBPL10-AS1 Gene

Publications for OSBPL10-AS1 Gene

No publications were found for OSBPL10-AS1 Gene.

Products for OSBPL10-AS1 Gene

Sources for OSBPL10-AS1 Gene

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