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Aliases for OSBPL10-AS1 Gene

Subcategory (RNA class) for OSBPL10-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for OSBPL10-AS1 Gene

  • OSBPL10 Antisense RNA 1 2 3 5
  • OSBPL10 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for OSBPL10-AS1 Gene

Previous GeneCards Identifiers for OSBPL10-AS1 Gene

  • GC00U933561

Summaries for OSBPL10-AS1 Gene

GeneCards Summary for OSBPL10-AS1 Gene

OSBPL10-AS1 (OSBPL10 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for OSBPL10-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OSBPL10-AS1 Gene

Genomics for OSBPL10-AS1 Gene

GeneHancer (GH) Regulatory Elements for OSBPL10-AS1 Gene

Promoters and enhancers for OSBPL10-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I031704 Enhancer 0.7 Ensembl ENCODE 567.8 +0.8 759 1.6 CTCF JUND SIN3A MNT FOSL2 FOS OSBPL10-AS1 ZNF587P1 OSBPL10
GH03I031944 Enhancer 1.3 Ensembl ENCODE dbSUPER 9.9 +242.9 242928 5 FOXA2 MLX ARID4B DMAP1 SLC30A9 SP5 MIER2 PPARG KAT8 NFIL3 OSBPL10 ZNF860 OSBPL10-AS1 GC03P031801 GC03P031803 GC03P031804 PIR35964
GH03I031724 Enhancer 0.7 ENCODE 12.4 +20.5 20466 0.9 CTCF PKNOX1 ZNF687 ATF1 CEBPB RAD21 RFX5 ZNF217 CTBP1 GATA3 OSBPL10-AS1 OSBPL10 ZNF587P1
GH03I031875 Enhancer 0.7 ENCODE dbSUPER 10.4 +172.6 172624 1.5 JUN CEBPB ZNF384 FOS EP300 OSBPL10-AS1 OSBPL10 GC03P031801 GC03P031803 GC03P031804 PIR35964 ZNF860
GH03I031594 Enhancer 0.2 dbSUPER 10.7 -108.4 -108443 2.1 OSBPL10-AS1 OSBPL10 GC03M031604 STT3B GC03M031530
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around OSBPL10-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for OSBPL10-AS1 Gene

Genomic Locations for OSBPL10-AS1 Gene
chr3:31,704,058-31,721,652
(GRCh38/hg38)
Size:
17,595 bases
Orientation:
Plus strand
chr3:31,745,550-31,763,144
(GRCh37/hg19)

Genomic View for OSBPL10-AS1 Gene

Genes around OSBPL10-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OSBPL10-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OSBPL10-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OSBPL10-AS1 Gene

Proteins for OSBPL10-AS1 Gene

Post-translational modifications for OSBPL10-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for OSBPL10-AS1 Gene

Domains & Families for OSBPL10-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OSBPL10-AS1 Gene

Function for OSBPL10-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OSBPL10-AS1 Gene

Localization for OSBPL10-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OSBPL10-AS1 Gene

Pathways & Interactions for OSBPL10-AS1 Gene

SuperPathways for OSBPL10-AS1 Gene

No Data Available

Interacting Proteins for OSBPL10-AS1 Gene

Gene Ontology (GO) - Biological Process for OSBPL10-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OSBPL10-AS1 Gene

Drugs & Compounds for OSBPL10-AS1 Gene

No Compound Related Data Available

Transcripts for OSBPL10-AS1 Gene

mRNA/cDNA for OSBPL10-AS1 Gene

(1) Additional mRNA sequences :
(8) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for OSBPL10-AS1 Gene

OSBPL10 antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for OSBPL10-AS1 Gene

No ASD Table

Relevant External Links for OSBPL10-AS1 Gene

GeneLoc Exon Structure for
OSBPL10-AS1
ECgene alternative splicing isoforms for
OSBPL10-AS1

Expression for OSBPL10-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OSBPL10-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for OSBPL10-AS1 Gene

This gene is overexpressed in Testis (x42.1).

SOURCE GeneReport for Unigene cluster for OSBPL10-AS1 Gene:

Hs.662428
genes like me logo Genes that share expression patterns with OSBPL10-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OSBPL10-AS1 Gene

Orthologs for OSBPL10-AS1 Gene

Evolution for OSBPL10-AS1 Gene

ENSEMBL:
Gene Tree for OSBPL10-AS1 (if available)
TreeFam:
Gene Tree for OSBPL10-AS1 (if available)

No data available for Orthologs for OSBPL10-AS1 Gene

Paralogs for OSBPL10-AS1 Gene

No data available for Paralogs for OSBPL10-AS1 Gene

Variants for OSBPL10-AS1 Gene

Sequence variations from dbSNP and Humsavar for OSBPL10-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000373725 -- 31,705,621(+) C/A intron_variant
rs1000615836 -- 31,719,339(+) T/C intron_variant
rs1000699338 -- 31,707,715(+) A/G intron_variant
rs1001129694 -- 31,721,997(+) G/A downstream_transcript_variant
rs1001211599 -- 31,716,779(+) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for OSBPL10-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1003285 CNV gain 25217958
nsv460485 CNV loss 19166990
nsv590033 CNV loss 21841781

Additional Variant Information for OSBPL10-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OSBPL10-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for OSBPL10-AS1 Gene

Disorders for OSBPL10-AS1 Gene

Additional Disease Information for OSBPL10-AS1

No disorders were found for OSBPL10-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OSBPL10-AS1 Gene

Publications for OSBPL10-AS1 Gene

No publications were found for OSBPL10-AS1 Gene.

Products for OSBPL10-AS1 Gene

Sources for OSBPL10-AS1 Gene

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