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Aliases & Descriptions for ORC2L
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| | | Descriptions |
|---|
| origin of replication 2-like 2 | | origin recognition complex protein 2 homolog 2 | | origin recognition complex, subunit 2 2 | | origin recognition complex, subunit 2 (yeast homolog)-like 1 | | origin recognition complex, subunit 2-like (yeast) 2 |
|
| | Search outside databases for aliases for ORC2L genePrevious GC identifers: GC02M199991 GC02M200499 GC02M201738 GC02M201977 GC02M201600 |
Summaries for ORC2L(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for ORC2L: The origin recognition complex (ORC) is a highly conserved six subunits protein complex essential for the initiation of the DNA replication in eukaryotic cells. Studies in yeast demonstrated that ORC binds specifically to origins of replication and serves as a platform for the assembly of additional initiation factors such as Cdc6 and Mcm proteins. The protein encoded by this gene is a subunit of the ORC complex. This protein forms a core complex with ORC3L, -4L, and -5L. It also interacts with CDC45L and MCM10, which are proteins known to be important for the initiation of DNA replication. This protein has been demonstrated to specifically associate with the origin of replication of Epstein-Barr virus in human cells, and is thought to be required for DNA replication from viral origin of replication. [provided by RefSeq] UniProtKB/Swiss-Prot: ORC2_HUMAN, Q13416Function: Component of the origin recognition complex (ORC) that binds origins of replication. It has a role in both chromosomal replication and mating type transcriptional silencing. Binds to the ARS consensus sequence (ACS) of origins of replication in an ATP-dependent mannerGene Wiki entry for ORC2L |
Genomic Location for ORC2L
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the ORC2L gene 
Entrez Gene cytogenetic band: 2q33 Ensembl cytogenetic band: 2q33.1 HGNC cytogenetic band: 2q33ORC2L Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 2 GeneLoc Exon Structure GeneLoc location for GC02M201483:
(about GC identifiers)
Start:
|
201,483,139 bp from pter |
End:
|
201,536,655 bp from pter |
Size:
|
53,517 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000002.10 NT_005403.16
| Proteins for ORC2L
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: ORC2_HUMAN, Q13416 (See
protein sequence)Recommended Name: Origin recognition complex subunit 2 Size: 577 amino acids; 65972 Da
Subunit: ORC is composed of six subunits. Interacts with DBF4 (By similarity). Interacts with MCM10
Subcellular location: Nucleus
Secondary accessions: Q13204Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_006181.1
ENSEMBL proteins: ENSP00000234296 ENSP00000386390
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: ORC2L 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for ORC2L: Assays for ORC2L: | Protein
Domains/ Families for ORC2L(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q13416
ProtoNet protein and cluster: Q13416 1 Blocks protein family: IPB007220 Origin recognition complex subunit 2
UniProtKB/Swiss-Prot: ORC2_HUMAN, Q13416Similarity: Belongs to the ORC2 family | Gene Function for ORC2L
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_006190
Applied Biosystems Silencer® siRNAs for ORC2L
Sigma-Aldrich siRNA for ORC2L  Sigma-Aldrich shRNA for ORC2L  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_006190                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_006190                                  untagged cDNA clone in CMV expression vector: NM_006190 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_006190
UniProtKB/Swiss-Prot: ORC2_HUMAN, Q13416Function: Component of the origin recognition complex (ORC) that binds origins of replication. It has a role in both chromosomal replication and mating type transcriptional silencing. Binds to the ARS consensus sequence (ACS) of origins of replication in an ATP-dependent mannerGenatlas biochemistry entry for ORC2L:homolog yeast origin of replication recognition complex,subunit ORC2-like,regulator of the initiation of DNA replication and transcription2 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for ORC2L
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
Gene Network CentralTM Interacting Genes and Proteins Network for ORC2L 
5/62 Interacting proteins for ORC2L (ENSP000002342963 Q134161, 2) via UniProtKB, MINT, and/or STRING (see all 62
)About this table
3 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for ORC2L(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for ORC2L 1 Novoseek chemical compound relationship for ORC2L gene
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| lysine |
20.66 |
1 |
12807890 (1) |
About this table
|
Transcripts for ORC2L(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_006190
Sigma-Aldrich siRNA for ORC2L  Sigma-Aldrich shRNA for ORC2L  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_006190 REFSEQ mRNAs for ORC2L gene: NM_006190.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_006190               OriGene GFP tagged cDNA clone in CMV expression vector: NM_006190                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_006190                                  untagged cDNA clone in CMV expression vector: NM_006190  Additional cDNA sequence: AK302614.1 AK316433.1 BC014834.1 CR596826.1 U27459.1 U40268.2 13 DOTS entries: DT.311834 DT.100730274 DT.100780158 DT.311835 DT.91819810 DT.95225732 DT.100780159 DT.120963437 DT.306161 DT.40122280 DT.75122760 DT.95269944 DT.120963364 24/125 AceView cDNA sequences (see all 125
):BQ003777 AU130158 AI814392 BU685377 BM834055 BU182508 BC014834 AW085682 AI890085 U40268 AW472983 NM_006190 AW473208 AW004830 BF445652 BQ775398 BM470184 AI805763 CR596826 CF552296 BP353154 BP367458 BM750483 CB136785
highest scoring ESTs for ORC2L:U27459 AL602737 AU130158 AW672939 BC014834 BG702866 BG719044 BI561185 BM470184 BM560290 Unigene Cluster for ORC2L: Origin recognition complex, subunit 2-like (yeast) Hs.444870 [show with all ESTs]Unigene Representative Sequence: NM_006190
GeneLoc Exon Structure
4 Alternative Splicing Database (ASD) splice patterns (SP) for ORC2L
| ExUns: | 1a | · | 1b | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11 | ^ | 12 | ^ | 13 | ^ | 14 | ^ | 15 | ^ | 16 | ^ | 17 | ^ | 18a | · | 18b | ^ | 19a | · | 19b | |
| SP1: | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | - |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for ORC2L
2 Ensembl transcripts including schematic representations: ENST00000234296
ENST00000410039
|
Expression for ORC2L
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| ORC2L expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for ORC2L
1 / 2 / 3 4 probe-sets matching ORC2L gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: --
SOURCE GeneReport for Unigene cluster: Hs.444870
Expression variation in blood from EXPOLDB for ORC2L |
Orthologs for ORC2L
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for ORC2L gene from 5/18 species (see all 18
)
About this table Species with no ortholog for ORC2L
ENSEMBL Gene Tree for ORC2L | Paralogs for ORC2L(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for ORC2L(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for ORC2L (up to first 250kb)
|
Disorders & Mutations for ORC2L
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 601182
1 Novoseek disease relationship for ORC2L gene
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| cancer |
0.00 |
2 |
11509178 (1) |
About this table
|
Medical News for ORC2L(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for ORC2L (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/56 PubMed articles for ORC2L gene (see all 56
):- Mouse and human homologues of the yeast origin of replication recognition complex subunit ORC2 and chromosomal localization of the cognate human gene ORC2L. (PubMed id 8808289)1, 2, 3, 4 Takahara K.... Greenspan D.S. (1996)
- The human homolog of Saccharomyces cerevisiae Mcm10 interacts with replication factors and dissociates from nuclease-resistant nuclear structures in G(2) phase. (PubMed id 11095689)1, 3, 4 Izumi M.... Hanaoka F. (2000)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Conserved initiator proteins in eukaryotes. (PubMed id 7502077)3, 4 Gavin K.A.... Stillman B.D. (1995)
- Replication from oriP of Epstein-Barr virus requires human ORC and is inhibited by geminin. (PubMed id 11509178)1, 3 Dhar S.K....Dutta A. (2001)
- Localization of proteins bound to a replication origin of human DNA along the cell cycle. (PubMed id 12912926)1, 3 Abdurashidova G....Falaschi A. (2003)
- Selective instability of Orc1 protein accounts for the absence of functional origin recognition complexes during the M-G(1) transition in mammals. (PubMed id 10835370)1, 3 Natale D.A....DePamphilis M.L. (2000)
- Human minichromosome maintenance proteins and human origin recognition complex 2 protein on chromatin. (PubMed id 9733749)1, 3 Ritzi M....Knippers R. (1998)
- Proliferating human cells hypomorphic for origin recognition complex 2 and pre-replicative complex formation have a defect in p53 activation and Cdk2 kinase activation. (PubMed id 16407251)1, 3 Teer J.K....Dutta A. (2006)
- Cell cycle-dependent proteolysis and phosphorylation of human Mcm10. (PubMed id 11602595)1, 3 Izumi M.... Hanaoka F. (2001)
|
Search for ORC2L
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing ORC2L
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing ORC2L
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ORC2L(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| Name | Description |
| NIEHS-SNPs | http://egp.gs.washington.edu/data/orc2l/ |
|
| | | About This Section
| --
| Services for ORC2L(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for ORC2L:

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|
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| Antibodies & Assays for ORC2L  (ORC2) |
| | Recombinant Proteins (ORC2) | | Antibodies (ORC2) |
| | | Search Tocris compounds for ORC2L |
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Incremental update: 13 Oct 2009
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