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Aliases for OR8H3 Gene

Aliases for OR8H3 Gene

  • Olfactory Receptor Family 8 Subfamily H Member 3 2 3 5
  • Olfactory Receptor OR11-172 3 4
  • Olfactory Receptor, Family 8, Subfamily H, Member 3 2
  • Olfactory Receptor 8H3 3
  • OR11-172 3

External Ids for OR8H3 Gene

Previous GeneCards Identifiers for OR8H3 Gene

  • GC11U990405
  • GC11P055666
  • GC11P055646
  • GC11P055890

Summaries for OR8H3 Gene

Entrez Gene Summary for OR8H3 Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR8H3 Gene

OR8H3 (Olfactory Receptor Family 8 Subfamily H Member 3) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Olfactory Signaling Pathway. GO annotations related to this gene include G-protein coupled receptor activity and odorant binding. An important paralog of this gene is OR8H2.

UniProtKB/Swiss-Prot for OR8H3 Gene

  • Odorant receptor.

Gene Wiki entry for OR8H3 Gene

Additional gene information for OR8H3 Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR8H3 Gene

Genomics for OR8H3 Gene

Regulatory Elements for OR8H3 Gene

Enhancers for OR8H3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11H056057 0.2 ENCODE 11.9 -64.6 -64564 0 OR5BN2P OR8H3 OR8I2 OR8I4P OR8H2 GC11P056055 OR5J1P
GH11H056058 0.2 ENCODE 11.9 -64.1 -64064 0 OR5BN2P OR8H3 OR8I2 OR8I4P OR8H2 LOC100507561 FAM8A2P GC11P056055 OR5J1P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OR8H3 on UCSC Golden Path with GeneCards custom track

Genomic Location for OR8H3 Gene

Chromosome:
11
Start:
56,122,373 bp from pter
End:
56,123,311 bp from pter
Size:
939 bases
Orientation:
Plus strand

Genomic View for OR8H3 Gene

Genes around OR8H3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR8H3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR8H3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR8H3 Gene

Proteins for OR8H3 Gene

  • Protein details for OR8H3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N146-OR8H3_HUMAN
    Recommended name:
    Olfactory receptor 8H3
    Protein Accession:
    Q8N146
    Secondary Accessions:
    • Q6IFB7

    Protein attributes for OR8H3 Gene

    Size:
    312 amino acids
    Molecular mass:
    35219 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR8H3 Gene

Post-translational modifications for OR8H3 Gene

Other Protein References for OR8H3 Gene

ENSEMBL proteins:
REFSEQ proteins:
HORDE protein sequence:

No data available for DME Specific Peptides for OR8H3 Gene

Domains & Families for OR8H3 Gene

Gene Families for OR8H3 Gene

HGNC:
Human Protein Atlas (HPA):
  • G-protein coupled receptors
  • Predicted membrane proteins

Protein Domains for OR8H3 Gene

Suggested Antigen Peptide Sequences for OR8H3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8N146

UniProtKB/Swiss-Prot:

OR8H3_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR8H3: view

Function for OR8H3 Gene

Molecular function for OR8H3 Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

Phenotypes From GWAS Catalog for OR8H3 Gene

Gene Ontology (GO) - Molecular Function for OR8H3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G-protein coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IBA --
GO:0005549 odorant binding IBA --
genes like me logo Genes that share ontologies with OR8H3: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for OR8H3
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR8H3 Gene

Localization for OR8H3 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR8H3 Gene

Cell membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for OR8H3 gene
Compartment Confidence
plasma membrane 5

Gene Ontology (GO) - Cellular Components for OR8H3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR8H3: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for OR8H3 Gene

Pathways & Interactions for OR8H3 Gene

genes like me logo Genes that share pathways with OR8H3: view

Pathways by source for OR8H3 Gene

Interacting Proteins for OR8H3 Gene

Gene Ontology (GO) - Biological Process for OR8H3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007165 signal transduction IEA --
GO:0007186 G-protein coupled receptor signaling pathway IBA --
GO:0007608 sensory perception of smell IEA --
GO:0050896 response to stimulus IEA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR8H3: view

No data available for SIGNOR curated interactions for OR8H3 Gene

Drugs & Compounds for OR8H3 Gene

No Compound Related Data Available

Transcripts for OR8H3 Gene

mRNA/cDNA for OR8H3 Gene

(1) REFSEQ mRNAs :
(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for OR8H3
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for OR8H3 Gene

No ASD Table

Relevant External Links for OR8H3 Gene

GeneLoc Exon Structure for
OR8H3
ECgene alternative splicing isoforms for
OR8H3

Expression for OR8H3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR8H3 Gene

NURSA nuclear receptor signaling pathways regulating expression of OR8H3 Gene:

OR8H3

SOURCE GeneReport for Unigene cluster for OR8H3 Gene:

Hs.553745
genes like me logo Genes that share expression patterns with OR8H3: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR8H3 Gene

Orthologs for OR8H3 Gene

This gene was present in the common ancestor of mammals.

Orthologs for OR8H3 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC466547 33
  • 98.82 (n)
OR8H3 34
  • 97 (a)
OneToOne
dog
(Canis familiaris)
Mammalia -- 34
  • 76 (a)
OneToMany
rat
(Rattus norvegicus)
Mammalia Olr527 33
  • 75.46 (n)
cow
(Bos Taurus)
Mammalia -- 34
  • 73 (a)
ManyToMany
-- 34
  • 71 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Olfr1099 34
  • 71 (a)
ManyToMany
Olfr1097 34
  • 69 (a)
ManyToMany
Olfr1100 34
  • 69 (a)
ManyToMany
Olfr1098 34
  • 68 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia -- 34
  • 57 (a)
ManyToMany
-- 34
  • 55 (a)
ManyToMany
Species where no ortholog for OR8H3 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR8H3 Gene

ENSEMBL:
Gene Tree for OR8H3 (if available)
TreeFam:
Gene Tree for OR8H3 (if available)

Paralogs for OR8H3 Gene

Paralogs for OR8H3 Gene

(451) SIMAP similar genes for OR8H3 Gene using alignment to 1 proteins:

Pseudogenes.org Pseudogenes for OR8H3 Gene

genes like me logo Genes that share paralogs with OR8H3: view

Variants for OR8H3 Gene

Sequence variations from dbSNP and Humsavar for OR8H3 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000017902 -- 56,122,442(+) AAGAG(A/G)TCCAG reference, missense
rs1000623333 -- 56,123,285(+) GAGTC(A/G)TGCAG reference, missense
rs1001465091 -- 56,121,130(+) TGTAA(A/T)AACAA upstream-variant-2KB
rs1001832924 -- 56,120,888(+) TCTGC(C/T)TTGGC upstream-variant-2KB
rs1003774656 -- 56,121,954(+) AAGCC(A/G)TTCAG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for OR8H3 Gene

Variant ID Type Subtype PubMed ID
dgv1205n100 CNV gain 25217958
dgv200e214 CNV gain 21293372
esv3579715 CNV loss 25503493
esv3579782 CNV gain 25503493
esv3579805 CNV gain 25503493
esv3626473 CNV gain 21293372
esv3892014 CNV loss 25118596
nsv1036290 CNV loss 25217958
nsv468575 CNV loss 19166990
nsv521440 CNV loss 19592680
nsv555095 CNV loss 21841781
nsv832160 CNV gain 17160897

Variation tolerance for OR8H3 Gene

Residual Variation Intolerance Score: 89.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 6.77; 78.96% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for OR8H3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR8H3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for OR8H3 Gene

Disorders for OR8H3 Gene

Relevant External Links for OR8H3

Genetic Association Database (GAD)
OR8H3
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
OR8H3

No disorders were found for OR8H3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR8H3 Gene

Publications for OR8H3 Gene

  1. The human olfactory receptor gene family. (PMID: 14983052) Malnic B … Buck LB (Proceedings of the National Academy of Sciences of the United States of America 2004) 3 4 60
  2. Genome-wide association for smoking cessation success: participants in the Patch in Practice trial of nicotine replacement. (PMID: 20235792) Uhl GR … Munafò MR (Pharmacogenomics 2010) 45 60

Products for OR8H3 Gene

Sources for OR8H3 Gene

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