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Aliases for OR8H1 Gene

Aliases for OR8H1 Gene

  • Olfactory Receptor Family 8 Subfamily H Member 1 2 3 5
  • Olfactory Receptor OR11-180 3 4
  • Olfactory Receptor, Family 8, Subfamily H, Member 1 2
  • Olfactory Receptor 8H1 3
  • OR11-180 3

External Ids for OR8H1 Gene

Previous GeneCards Identifiers for OR8H1 Gene

  • GC11U990352
  • GC11M055833
  • GC11M055814
  • GC11M056057

Summaries for OR8H1 Gene

Entrez Gene Summary for OR8H1 Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR8H1 Gene

OR8H1 (Olfactory Receptor Family 8 Subfamily H Member 1) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Olfactory Signaling Pathway. GO annotations related to this gene include G-protein coupled receptor activity and odorant binding. An important paralog of this gene is OR8H3.

UniProtKB/Swiss-Prot for OR8H1 Gene

  • Odorant receptor.

Gene Wiki entry for OR8H1 Gene

Additional gene information for OR8H1 Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR8H1 Gene

Genomics for OR8H1 Gene

Regulatory Elements for OR8H1 Gene


Genomic Location for OR8H1 Gene

Chromosome:
11
Start:
56,288,462 bp from pter
End:
56,292,254 bp from pter
Size:
3,793 bases
Orientation:
Minus strand

Genomic View for OR8H1 Gene

Genes around OR8H1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR8H1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR8H1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR8H1 Gene

Proteins for OR8H1 Gene

  • Protein details for OR8H1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NGG4-OR8H1_HUMAN
    Recommended name:
    Olfactory receptor 8H1
    Protein Accession:
    Q8NGG4
    Secondary Accessions:
    • B2RNI7
    • Q6IFC5

    Protein attributes for OR8H1 Gene

    Size:
    311 amino acids
    Molecular mass:
    35228 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR8H1 Gene

Post-translational modifications for OR8H1 Gene

  • Glycosylation at Asn5
  • Modification sites at PhosphoSitePlus

Other Protein References for OR8H1 Gene

ENSEMBL proteins:
REFSEQ proteins:
HORDE protein sequence:

No data available for DME Specific Peptides for OR8H1 Gene

Domains & Families for OR8H1 Gene

Gene Families for OR8H1 Gene

HGNC:
Human Protein Atlas (HPA):
  • G-protein coupled receptors
  • Predicted membrane proteins

Protein Domains for OR8H1 Gene

Suggested Antigen Peptide Sequences for OR8H1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8NGG4

UniProtKB/Swiss-Prot:

OR8H1_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR8H1: view

Function for OR8H1 Gene

Molecular function for OR8H1 Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

Gene Ontology (GO) - Molecular Function for OR8H1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G-protein coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IBA,IEA --
GO:0005549 odorant binding IBA --
genes like me logo Genes that share ontologies with OR8H1: view

Phenotypes for OR8H1 Gene

GenomeRNAi human phenotypes for OR8H1:
genes like me logo Genes that share phenotypes with OR8H1: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for OR8H1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR8H1 Gene

Localization for OR8H1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR8H1 Gene

Cell membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for OR8H1 gene
Compartment Confidence
plasma membrane 5

Gene Ontology (GO) - Cellular Components for OR8H1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS,IEA --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR8H1: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for OR8H1 Gene

Pathways & Interactions for OR8H1 Gene

genes like me logo Genes that share pathways with OR8H1: view

Pathways by source for OR8H1 Gene

Interacting Proteins for OR8H1 Gene

Gene Ontology (GO) - Biological Process for OR8H1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007165 signal transduction IEA --
GO:0007186 G-protein coupled receptor signaling pathway IEA,IBA --
GO:0007608 sensory perception of smell IEA --
GO:0050896 response to stimulus IEA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR8H1: view

No data available for SIGNOR curated interactions for OR8H1 Gene

Drugs & Compounds for OR8H1 Gene

No Compound Related Data Available

Transcripts for OR8H1 Gene

mRNA/cDNA for OR8H1 Gene

(1) REFSEQ mRNAs :
(1) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for OR8H1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for OR8H1 Gene

No ASD Table

Relevant External Links for OR8H1 Gene

GeneLoc Exon Structure for
OR8H1
ECgene alternative splicing isoforms for
OR8H1

Expression for OR8H1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR8H1 Gene

NURSA nuclear receptor signaling pathways regulating expression of OR8H1 Gene:

OR8H1

SOURCE GeneReport for Unigene cluster for OR8H1 Gene:

Hs.553628
genes like me logo Genes that share expression patterns with OR8H1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR8H1 Gene

Orthologs for OR8H1 Gene

This gene was present in the common ancestor of mammals.

Orthologs for OR8H1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia OR8H1 34
  • 95 (a)
OneToOne
dog
(Canis familiaris)
Mammalia LOC100685331 33
  • 84.8 (n)
-- 34
  • 80 (a)
OneToMany
cow
(Bos Taurus)
Mammalia OR8H3 33
  • 79.98 (n)
-- 34
  • 74 (a)
ManyToMany
-- 34
  • 73 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Or8h9 52 Olfr1099 33 16 34
  • 78.79 (n)
Or8h7 52 Olfr1097 34
  • 71 (a)
ManyToMany
Or8h8 52 Olfr1098 34
  • 71 (a)
ManyToMany
Or8h10 52 Olfr1100 34
  • 70 (a)
ManyToMany
Or8h11-ps 52 Olfr1103-ps1
  • chr2:87,009,941-87,010,874
Or8h6 52 Olfr1096
  • chr2:86,872,777-86,873,721
rat
(Rattus norvegicus)
Mammalia Olr529 33
  • 77.16 (n)
oppossum
(Monodelphis domestica)
Mammalia -- 34
  • 59 (a)
ManyToMany
-- 34
  • 57 (a)
ManyToMany
Species where no ortholog for OR8H1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR8H1 Gene

ENSEMBL:
Gene Tree for OR8H1 (if available)
TreeFam:
Gene Tree for OR8H1 (if available)

Paralogs for OR8H1 Gene

Paralogs for OR8H1 Gene

(452) SIMAP similar genes for OR8H1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with OR8H1: view

Variants for OR8H1 Gene

Sequence variations from dbSNP and Humsavar for OR8H1 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs11600896 --
rs17540861 --

Structural Variations from Database of Genomic Variants (DGV) for OR8H1 Gene

Variant ID Type Subtype PubMed ID
esv3579722 CNV loss 25503493
esv3892014 CNV loss 25118596
nsv832161 CNV gain 17160897

Variation tolerance for OR8H1 Gene

Residual Variation Intolerance Score: 90.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.56; 55.96% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for OR8H1 Gene

Human Gene Mutation Database (HGMD)
OR8H1
SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR8H1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for OR8H1 Gene

Disorders for OR8H1 Gene

Relevant External Links for OR8H1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
OR8H1

No disorders were found for OR8H1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR8H1 Gene

Publications for OR8H1 Gene

  1. The human olfactory receptor gene family. (PMID: 14983052) Malnic B … Buck LB (Proceedings of the National Academy of Sciences of the United States of America 2004) 3 4 60
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4 60
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for OR8H1 Gene

Sources for OR8H1 Gene

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