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Aliases for OR8F1P Gene

Subcategory (RNA class) for OR8F1P Gene

lncRNA

Aliases for OR8F1P Gene

  • Olfactory Receptor Family 8 Subfamily F Member 1 Pseudogene 2 3 5
  • Olfactory Receptor, Family 8, Subfamily F, Member 1 Pseudogene 2

External Ids for OR8F1P Gene

ORGUL Members for OR8F1P Gene

Previous GeneCards Identifiers for OR8F1P Gene

  • GC11U990378
  • GC11P123616
  • GC11P123583
  • GC11P124077

Summaries for OR8F1P Gene

Entrez Gene Summary for OR8F1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR8F1P Gene

OR8F1P (Olfactory Receptor Family 8 Subfamily F Member 1 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR8F1P Gene

Genomics for OR8F1P Gene

Regulatory Elements for OR8F1P Gene

Enhancers for OR8F1P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F123212 0.2 ENCODE 16.2 -993.8 -993844 1.2 PKNOX1 SIN3A FEZF1 ZNF2 YY1 CBX5 KLF7 FOS ZNF263 JUNB LOC105369541 PHBP17 LOC341056 OR6X1 OR6M3P OR6M2P TMEM225 OR10D3 OR8F1P ENSG00000254710
GH11F124206 0.6 ENCODE 0.8 +0.3 297 1.0 PKNOX1 ATF1 ARNT CBX5 ELK1 GATA2 KLF13 NCOA1 REST SMARCB1 VWA5A OR8G1 MSANTD2 OR8F1P OR8G3P
GH11F124193 1 Ensembl ENCODE 0.4 -12.7 -12688 2.4 TBP CTCF CBX3 TAF1 MAX RAD21 CHAMP1 SMC3 ZSCAN29 CREM VWA5A OR8D1 SPA17 GC11P124186 OR8F1P
GH11F124190 0.2 ENCODE 0.3 -16.5 -16453 1.1 HDAC1 TAL1 TEAD4 CHAMP1 FOXK2 GATA2 POLR2A NCOR1 TRIM24 SMARCE1 VWA5A GC11P124186 OR8F1P
GH11F124191 0.8 FANTOM5 0.3 -15.1 -15094 0.3 DDX20 MAFG VWA5A OR8A1 OR6X1 OR10G7 OR8G2 OR8B12 OR4D5 OR10G4 OR6M1 OR8G1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around OR8F1P on UCSC Golden Path with GeneCards custom track

Genomic Location for OR8F1P Gene

Chromosome:
11
Start:
124,207,183 bp from pter
End:
124,208,146 bp from pter
Size:
964 bases
Orientation:
Plus strand

Genomic View for OR8F1P Gene

Genes around OR8F1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR8F1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR8F1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR8F1P Gene

Proteins for OR8F1P Gene

Post-translational modifications for OR8F1P Gene

No Post-translational modifications

Other Protein References for OR8F1P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR8F1P Gene

Domains & Families for OR8F1P Gene

Gene Families for OR8F1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR8F1P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR8F1P Gene

Function for OR8F1P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR8F1P Gene

Localization for OR8F1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OR8F1P Gene

Pathways & Interactions for OR8F1P Gene

SuperPathways for OR8F1P Gene

No Data Available

Interacting Proteins for OR8F1P Gene

Gene Ontology (GO) - Biological Process for OR8F1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR8F1P Gene

Transcripts for OR8F1P Gene

mRNA/cDNA for OR8F1P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR8F1P Gene

No ASD Table

Relevant External Links for OR8F1P Gene

GeneLoc Exon Structure for
OR8F1P
ECgene alternative splicing isoforms for
OR8F1P

Expression for OR8F1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OR8F1P Gene

NURSA nuclear receptor signaling pathways regulating expression of OR8F1P Gene:

OR8F1P
genes like me logo Genes that share expression patterns with OR8F1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for OR8F1P Gene

Orthologs for OR8F1P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR8F1P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Or8ae1-ps 55 Olfr966-ps1
  • chr9:39,723,858-39,724,529
Or8f1 55 Olfr967
  • chr9:39,750,388-39,751,317
Or8f18 55 Olfr150
  • chr9:39,736,817-39,737,752
Or8f19 55 Olfr919
  • chr9:38,697,432-38,698,376
Or8f20 55 Olfr965
  • chr9:39,719,229-39,720,164
Or8f21 55 Olfr968
  • chr9:39,771,857-39,772,798
Or8f22 55 Olfr969
  • chr9:39,795,377-39,796,309
Or8f23 55 Olfr972
  • chr9:39,873,277-39,874,218
Species where no ortholog for OR8F1P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR8F1P Gene

ENSEMBL:
Gene Tree for OR8F1P (if available)
TreeFam:
Gene Tree for OR8F1P (if available)

Paralogs for OR8F1P Gene

No data available for Paralogs for OR8F1P Gene

Variants for OR8F1P Gene

Relevant External Links for OR8F1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR8F1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR8F1P Gene

Disorders for OR8F1P Gene

No disorders were found for OR8F1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR8F1P Gene

Publications for OR8F1P Gene

No publications were found for OR8F1P Gene.

Products for OR8F1P Gene

Sources for OR8F1P Gene

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