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Aliases for OR6W1P Gene

Aliases for OR6W1P Gene

  • Olfactory Receptor Family 6 Subfamily W Member 1 Pseudogene 2 3 5
  • Olfactory Receptor, Family 6, Subfamily W, Member 1 Pseudogene 2 3
  • Olfactory Receptor Sdolf 3
  • Sdolf 3
  • OR6W1 3

External Ids for OR6W1P Gene

Previous HGNC Symbols for OR6W1P Gene

  • OR6W1

Previous GeneCards Identifiers for OR6W1P Gene

  • GC07M142231
  • GC07M142276
  • GC07M142469
  • GC07M142759

Summaries for OR6W1P Gene

Entrez Gene Summary for OR6W1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR6W1P Gene

OR6W1P (Olfactory Receptor Family 6 Subfamily W Member 1 Pseudogene) is a Pseudogene.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR6W1P Gene

Genomics for OR6W1P Gene

Regulatory Elements for OR6W1P Gene

Enhancers for OR6W1P Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around OR6W1P on UCSC Golden Path with GeneCards custom track

Genomic Location for OR6W1P Gene

Chromosome:
7
Start:
143,062,284 bp from pter
End:
143,063,785 bp from pter
Size:
1,502 bases
Orientation:
Minus strand

Genomic View for OR6W1P Gene

Genes around OR6W1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR6W1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR6W1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR6W1P Gene

Proteins for OR6W1P Gene

Post-translational modifications for OR6W1P Gene

No Post-translational modifications

Other Protein References for OR6W1P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR6W1P Gene

Domains & Families for OR6W1P Gene

Gene Families for OR6W1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR6W1P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR6W1P Gene

Function for OR6W1P Gene

genes like me logo Genes that share phenotypes with OR6W1P: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR6W1P Gene

Localization for OR6W1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OR6W1P Gene

Pathways & Interactions for OR6W1P Gene

SuperPathways for OR6W1P Gene

No Data Available

Interacting Proteins for OR6W1P Gene

Gene Ontology (GO) - Biological Process for OR6W1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR6W1P Gene

Drugs & Compounds for OR6W1P Gene

No Compound Related Data Available

Transcripts for OR6W1P Gene

mRNA/cDNA for OR6W1P Gene

(5) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for OR6W1P Gene

Olfactory receptor, family 6, subfamily W, member 1 pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for OR6W1P Gene

No ASD Table

Relevant External Links for OR6W1P Gene

GeneLoc Exon Structure for
OR6W1P
ECgene alternative splicing isoforms for
OR6W1P

Expression for OR6W1P Gene

mRNA expression in normal human tissues for OR6W1P Gene

mRNA differential expression in normal tissues according to GTEx for OR6W1P Gene

This gene is overexpressed in Testis (x12.9), Whole Blood (x10.0), Brain - Spinal cord (cervical c-1) (x5.2), and Brain - Putamen (basal ganglia) (x4.4).

SOURCE GeneReport for Unigene cluster for OR6W1P Gene Hs.339818

genes like me logo Genes that share expression patterns with OR6W1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for OR6W1P Gene

Orthologs for OR6W1P Gene

Evolution for OR6W1P Gene

ENSEMBL:
Gene Tree for OR6W1P (if available)
TreeFam:
Gene Tree for OR6W1P (if available)

No data available for Orthologs for OR6W1P Gene

Paralogs for OR6W1P Gene

No data available for Paralogs for OR6W1P Gene

Variants for OR6W1P Gene

Sequence variations from dbSNP and Humsavar for OR6W1P Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs6951048 -- 143,063,964(+) CAAAT(G/T)TAATG upstream-variant-2KB
rs12668105 -- 143,063,769(+) GGGGC(A/G)AGGAA nc-transcript-variant
rs6971445 -- 143,063,672(+) TCAGG(A/T)CCCCA nc-transcript-variant
rs7812146 -- 143,062,488(+) CTCAC(C/T)TACAG nc-transcript-variant
rs10226320 -- 143,064,445(+) ATTCA(A/G)CACAT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for OR6W1P Gene

Variant ID Type Subtype PubMed ID
nsv889274 CNV Loss 21882294

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for OR6W1P Gene

Disorders for OR6W1P Gene

Relevant External Links for OR6W1P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
OR6W1P

No disorders were found for OR6W1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR6W1P Gene

Publications for OR6W1P Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 67
  2. DEFOG: a practical scheme for deciphering families of genes. (PMID: 12213199) Fuchs T. … Shamir R. (Genomics 2002) 3

Products for OR6W1P Gene

Sources for OR6W1P Gene

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