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Aliases for OR6W1P Gene

Aliases for OR6W1P Gene

  • Olfactory Receptor, Family 6, Subfamily W, Member 1 Pseudogene 2 3
  • Olfactory Receptor Sdolf 3
  • Sdolf 3
  • OR6W1 3

External Ids for OR6W1P Gene

Previous Symbols for OR6W1P Gene

  • OR6W1

Summaries for OR6W1P Gene

Entrez Gene Summary for OR6W1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR6W1P Gene

OR6W1P (Olfactory Receptor, Family 6, Subfamily W, Member 1 Pseudogene) is a Pseudogene.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR6W1P Gene

Genomics for OR6W1P Gene

Genomic Location for OR6W1P Gene

Start:
143,062,284 bp from pter
End:
143,063,785 bp from pter
Size:
1,502 bases
Orientation:
Minus strand

Genomic View for OR6W1P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for OR6W1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR6W1P Gene

Regulatory Elements for OR6W1P Gene

Proteins for OR6W1P Gene

Post-translational modifications for OR6W1P Gene

No Post-translational modifications

No data available for DME Specific Peptides for OR6W1P Gene

Domains for OR6W1P Gene

Gene Families for OR6W1P Gene

HGNC:
  • OR6 :GPCR / Class A : Olfactory receptors
genes like me logo Genes that share domains with OR6W1P: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for OR6W1P Gene

Function for OR6W1P Gene

Phenotypes for OR6W1P Gene

GenomeRNAi human phenotypes for OR6W1P:
genes like me logo Genes that share phenotypes with OR6W1P: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for OR6W1P Gene

Localization for OR6W1P Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for OR6W1P Gene COMPARTMENTS Subcellular localization image for OR6W1P gene
Compartment Confidence
plasma membrane 3

No data available for Gene Ontology (GO) - Cellular Components for OR6W1P Gene

Pathways for OR6W1P Gene

SuperPathways for OR6W1P Gene

No Data Available

Interacting Proteins for OR6W1P Gene

Gene Ontology (GO) - Biological Process for OR6W1P Gene

None

No data available for Pathways by source for OR6W1P Gene

Transcripts for OR6W1P Gene

mRNA/cDNA for OR6W1P Gene

(5) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for OR6W1P Gene

Olfactory receptor, family 6, subfamily W, member 1 pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for OR6W1P Gene

No ASD Table

Relevant External Links for OR6W1P Gene

GeneLoc Exon Structure for
OR6W1P
ECgene alternative splicing isoforms for
OR6W1P

Expression for OR6W1P Gene

mRNA expression in normal human tissues for OR6W1P Gene

mRNA differential expression in normal tissues according to GTEx for OR6W1P Gene

This gene is overexpressed in Testis (12.9), Whole Blood (10.0), Brain - Spinal cord (cervical c-1) (5.2), and Brain - Putamen (basal ganglia) (4.4).

SOURCE GeneReport for Unigene cluster for OR6W1P Gene Hs.339818

genes like me logo Genes that share expressions with OR6W1P: view

Orthologs for OR6W1P Gene

Evolution for OR6W1P Gene

ENSEMBL:
Gene Tree for OR6W1P (if available)
TreeFam:
Gene Tree for OR6W1P (if available)

No data available for Orthologs for OR6W1P Gene

Paralogs for OR6W1P Gene

No data available for Paralogs for OR6W1P Gene

Variants for OR6W1P Gene

Sequence variations from dbSNP and Humsavar for OR6W1P Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs3812399 -- 143,062,710(+) GGTGA(C/G)AGGCA nc-transcript-variant
rs6951048 -- 143,063,964(+) CAAAT(G/T)TAATG upstream-variant-2KB
rs6971445 -- 143,063,672(+) TCAGG(A/T)CCCCA nc-transcript-variant
rs7812146 -- 143,062,488(+) CTCAC(C/T)TACAG nc-transcript-variant
rs10226320 -- 143,064,445(+) ATTCA(A/G)CACAT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for OR6W1P Gene

Variant ID Type Subtype PubMed ID
nsv889274 CNV Loss 21882294

Relevant External Links for OR6W1P Gene

HapMap Linkage Disequilibrium report
OR6W1P

Disorders for OR6W1P Gene

No disorders were found for OR6W1P Gene.

No data available for UniProtKB/Swiss-Prot for OR6W1P Gene

Publications for OR6W1P Gene

  1. DEFOG: a practical scheme for deciphering families of genes. (PMID: 12213199) Fuchs T. … Shamir R. (Genomics 2002) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for OR6W1P Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate OR6W1P
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for OR6W1P
    • Block miRNA regulation of OR6W1P using miScript Target Protectors

    Sources for OR6W1P Gene

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