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Aliases for OR6C75 Gene

Aliases for OR6C75 Gene

  • Olfactory Receptor Family 6 Subfamily C Member 75 2 3 5
  • Olfactory Receptor, Family 6, Subfamily C, Member 75 2

External Ids for OR6C75 Gene

Previous GeneCards Identifiers for OR6C75 Gene

  • GC12P054045
  • GC12U900478
  • GC12P055758

Summaries for OR6C75 Gene

Entrez Gene Summary for OR6C75 Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR6C75 Gene

OR6C75 (Olfactory Receptor Family 6 Subfamily C Member 75) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Olfactory Signaling Pathway. GO annotations related to this gene include G-protein coupled receptor activity and olfactory receptor activity. An important paralog of this gene is OR6C76.

UniProtKB/Swiss-Prot for OR6C75 Gene

  • Odorant receptor.

Additional gene information for OR6C75 Gene

No data available for CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR6C75 Gene

Genomics for OR6C75 Gene

Regulatory Elements for OR6C75 Gene

Enhancers for OR6C75 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H055020 0.5 FANTOM5 dbSUPER 6.9 -342.1 -342126 0 OR6C3 OR6C65 OR9K2 OR6C75 NEUROD4 OR6C6 OR6C2 OR10A7 OR6C74 OR6C76
GH12H055629 0.5 FANTOM5 dbSUPER 1.8 +266.3 266308 0 MMP19 OR6C4 OR10P1 OR6C65 ZC3H10 OR6C74 OR9K2 OR6C3 OR6C2 OR6C6
GH12H055799 0.3 FANTOM5 2.1 +436.5 436494 0 SUOX OR6C3 OR6C75 SARNP ENSG00000257509
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OR6C75 on UCSC Golden Path with GeneCards custom track

Genomic Location for OR6C75 Gene

Chromosome:
12
Start:
55,362,975 bp from pter
End:
55,369,279 bp from pter
Size:
6,305 bases
Orientation:
Plus strand

Genomic View for OR6C75 Gene

Genes around OR6C75 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR6C75 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR6C75 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR6C75 Gene

Proteins for OR6C75 Gene

  • Protein details for OR6C75 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NL08-O6C75_HUMAN
    Recommended name:
    Olfactory receptor 6C75
    Protein Accession:
    A6NL08

    Protein attributes for OR6C75 Gene

    Size:
    312 amino acids
    Molecular mass:
    35372 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR6C75 Gene

Post-translational modifications for OR6C75 Gene

  • Glycosylation at posLast=33
  • Modification sites at PhosphoSitePlus

Other Protein References for OR6C75 Gene

ENSEMBL proteins:
REFSEQ proteins:
HORDE protein sequence:

No data available for DME Specific Peptides for OR6C75 Gene

Domains & Families for OR6C75 Gene

Gene Families for OR6C75 Gene

HGNC:
Human Protein Atlas (HPA):
  • G-protein coupled receptors
  • Predicted membrane proteins

Protein Domains for OR6C75 Gene

Suggested Antigen Peptide Sequences for OR6C75 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

A6NL08

UniProtKB/Swiss-Prot:

O6C75_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR6C75: view

Function for OR6C75 Gene

Molecular function for OR6C75 Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

Gene Ontology (GO) - Molecular Function for OR6C75 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G-protein coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IEA --
genes like me logo Genes that share ontologies with OR6C75: view

Phenotypes for OR6C75 Gene

GenomeRNAi human phenotypes for OR6C75:
genes like me logo Genes that share phenotypes with OR6C75: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for OR6C75
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR6C75 Gene

Localization for OR6C75 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR6C75 Gene

Cell membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for OR6C75 gene
Compartment Confidence
plasma membrane 5

Gene Ontology (GO) - Cellular Components for OR6C75 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR6C75: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for OR6C75 Gene

Pathways & Interactions for OR6C75 Gene

genes like me logo Genes that share pathways with OR6C75: view

Pathways by source for OR6C75 Gene

Interacting Proteins for OR6C75 Gene

Gene Ontology (GO) - Biological Process for OR6C75 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007165 signal transduction IEA --
GO:0007186 G-protein coupled receptor signaling pathway IEA --
GO:0007608 sensory perception of smell IEA --
GO:0050896 response to stimulus IEA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR6C75: view

No data available for SIGNOR curated interactions for OR6C75 Gene

Drugs & Compounds for OR6C75 Gene

No Compound Related Data Available

Transcripts for OR6C75 Gene

mRNA/cDNA for OR6C75 Gene

(1) REFSEQ mRNAs :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for OR6C75
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for OR6C75 Gene

No ASD Table

Relevant External Links for OR6C75 Gene

GeneLoc Exon Structure for
OR6C75
ECgene alternative splicing isoforms for
OR6C75

Expression for OR6C75 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR6C75 Gene

Protein differential expression in normal tissues from HIPED for OR6C75 Gene

This gene is overexpressed in Serum (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for OR6C75 Gene



Protein tissue co-expression partners for OR6C75 Gene

NURSA nuclear receptor signaling pathways regulating expression of OR6C75 Gene:

OR6C75

SOURCE GeneReport for Unigene cluster for OR6C75 Gene:

Hs.554554
genes like me logo Genes that share expression patterns with OR6C75: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR6C75 Gene

Orthologs for OR6C75 Gene

This gene was present in the common ancestor of chordates.

Orthologs for OR6C75 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia OR6C75 33 34
  • 88.03 (n)
dog
(Canis familiaris)
Mammalia LOC100686973 33
  • 87.93 (n)
-- 34
  • 83 (a)
OneToMany
-- 34
  • 83 (a)
OneToMany
-- 34
  • 80 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Or6c75 52 Olfr790 33 16 34
  • 87.27 (n)
oppossum
(Monodelphis domestica)
Mammalia -- 34
  • 72 (a)
ManyToMany
rat
(Rattus norvegicus)
Mammalia Olr1012 33
  • 71.77 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia -- 34
  • 70 (a)
ManyToMany
-- 34
  • 68 (a)
ManyToMany
-- 34
  • 67 (a)
ManyToMany
-- 34
  • 66 (a)
ManyToMany
-- 34
  • 65 (a)
ManyToMany
-- 34
  • 65 (a)
ManyToMany
-- 34
  • 64 (a)
ManyToMany
-- 34
  • 64 (a)
ManyToMany
-- 34
  • 59 (a)
ManyToMany
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100498247 33
  • 55.67 (n)
zebrafish
(Danio rerio)
Actinopterygii LOC100001653 33
  • 53.56 (n)
Species where no ortholog for OR6C75 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for OR6C75 Gene

ENSEMBL:
Gene Tree for OR6C75 (if available)
TreeFam:
Gene Tree for OR6C75 (if available)

Paralogs for OR6C75 Gene

Paralogs for OR6C75 Gene

(453) SIMAP similar genes for OR6C75 Gene using alignment to 1 proteins:

Pseudogenes.org Pseudogenes for OR6C75 Gene

genes like me logo Genes that share paralogs with OR6C75: view

Variants for OR6C75 Gene

Sequence variations from dbSNP and Humsavar for OR6C75 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs1000288425 -- 55,365,747(+) TAGTT(A/C)TTCTC reference, missense
rs1001915451 -- 55,366,478(+) CATAA(A/C)ATAGA downstream-variant-500B
rs1002731471 -- 55,363,737(+) TGAGC(C/T)TCATT upstream-variant-2KB
rs1002950943 -- 55,363,227(+) CAAAA(C/G)CTCTT upstream-variant-2KB
rs1003706479 -- 55,363,335(+) GGAAT(A/G)TAATT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for OR6C75 Gene

Variant ID Type Subtype PubMed ID
nsv1044138 CNV loss 25217958
nsv1045950 CNV gain 25217958
nsv559001 CNV loss 21841781

Variation tolerance for OR6C75 Gene

Residual Variation Intolerance Score: 84.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.28; 53.01% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for OR6C75 Gene

Human Gene Mutation Database (HGMD)
OR6C75
SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR6C75

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for OR6C75 Gene

Disorders for OR6C75 Gene

Relevant External Links for OR6C75

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
OR6C75

No disorders were found for OR6C75 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR6C75 Gene

Publications for OR6C75 Gene

  1. Variants in the 1q21 risk region are associated with a visual endophenotype of autism and schizophrenia. (PMID: 24152035) Goodbourn PT … Mollon JD (Genes, brain, and behavior 2014) 3 60
  2. The finished DNA sequence of human chromosome 12. (PMID: 16541075) Scherer SE … Baylor College of Medicine Human Genome Sequencing Center Sequence Production Team (Nature 2006) 4 60

Products for OR6C75 Gene

Sources for OR6C75 Gene

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