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Aliases for OR5W2 Gene

Aliases for OR5W2 Gene

  • Olfactory Receptor Family 5 Subfamily W Member 2 2 3 5
  • Olfactory Receptor, Family 5, Subfamily W, Member 2 2 3
  • Olfactory Receptor OR11-155 3 4
  • Olfactory Receptor 5W3 3 4
  • OR5W2P 3 4
  • OR5W3P 3 4
  • Olfactory Receptor, Family 5, Subfamily W, Member 3 Pseudogene 3

External Ids for OR5W2 Gene

Previous HGNC Symbols for OR5W2 Gene

  • OR5W2P
  • OR5W3P

Previous GeneCards Identifiers for OR5W2 Gene

  • GC11U900575
  • GC11M055437
  • GC11M055684

Summaries for OR5W2 Gene

Entrez Gene Summary for OR5W2 Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR5W2 Gene

OR5W2 (Olfactory Receptor Family 5 Subfamily W Member 2) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Olfactory Signaling Pathway. GO annotations related to this gene include G-protein coupled receptor activity and odorant binding. An important paralog of this gene is OR5I1.

UniProtKB/Swiss-Prot for OR5W2 Gene

  • Odorant receptor.

Gene Wiki entry for OR5W2 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR5W2 Gene

Genomics for OR5W2 Gene

Regulatory Elements for OR5W2 Gene

Enhancers for OR5W2 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around OR5W2 on UCSC Golden Path with GeneCards custom track

Genomic Location for OR5W2 Gene

Chromosome:
11
Start:
55,913,650 bp from pter
End:
55,914,582 bp from pter
Size:
933 bases
Orientation:
Minus strand

Genomic View for OR5W2 Gene

Genes around OR5W2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR5W2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR5W2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR5W2 Gene

Proteins for OR5W2 Gene

  • Protein details for OR5W2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NH69-OR5W2_HUMAN
    Recommended name:
    Olfactory receptor 5W2
    Protein Accession:
    Q8NH69

    Protein attributes for OR5W2 Gene

    Size:
    310 amino acids
    Molecular mass:
    35167 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR5W2 Gene

Proteomics data for OR5W2 Gene at MOPED

Post-translational modifications for OR5W2 Gene

No Post-translational modifications

Other Protein References for OR5W2 Gene

ENSEMBL proteins:
REFSEQ proteins:
HORDE protein sequence:

No data available for DME Specific Peptides for OR5W2 Gene

Domains & Families for OR5W2 Gene

Gene Families for OR5W2 Gene

Protein Domains for OR5W2 Gene

Suggested Antigen Peptide Sequences for OR5W2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8NH69

UniProtKB/Swiss-Prot:

OR5W2_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR5W2: view

Function for OR5W2 Gene

Molecular function for OR5W2 Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

Gene Ontology (GO) - Molecular Function for OR5W2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005549 odorant binding IBA --
genes like me logo Genes that share ontologies with OR5W2: view

Phenotypes for OR5W2 Gene

genes like me logo Genes that share phenotypes with OR5W2: view

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR5W2 Gene

Localization for OR5W2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR5W2 Gene

Cell membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for OR5W2 Gene COMPARTMENTS Subcellular localization image for OR5W2 gene
Compartment Confidence
plasma membrane 5

Gene Ontology (GO) - Cellular Components for OR5W2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR5W2: view

Pathways & Interactions for OR5W2 Gene

genes like me logo Genes that share pathways with OR5W2: view

Pathways by source for OR5W2 Gene

Interacting Proteins for OR5W2 Gene

Gene Ontology (GO) - Biological Process for OR5W2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR5W2: view

No data available for SIGNOR curated interactions for OR5W2 Gene

Drugs & Compounds for OR5W2 Gene

No Compound Related Data Available

Transcripts for OR5W2 Gene

mRNA/cDNA for OR5W2 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR5W2 Gene

No ASD Table

Relevant External Links for OR5W2 Gene

GeneLoc Exon Structure for
OR5W2
ECgene alternative splicing isoforms for
OR5W2

Expression for OR5W2 Gene

mRNA expression in normal human tissues for OR5W2 Gene

SOURCE GeneReport for Unigene cluster for OR5W2 Gene Hs.554526

genes like me logo Genes that share expression patterns with OR5W2: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for OR5W2 Gene

Orthologs for OR5W2 Gene

This gene was present in the common ancestor of mammals.

Orthologs for OR5W2 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia LOC789300 35
  • 82.25 (n)
  • 82.79 (a)
-- 36
  • 67 (a)
OneToMany
-- 36
  • 67 (a)
OneToMany
-- 36
  • 80 (a)
OneToMany
-- 36
  • 82 (a)
OneToMany
-- 36
  • 83 (a)
OneToMany
-- 36
  • 77 (a)
OneToMany
-- 36
  • 74 (a)
OneToMany
-- 36
  • 65 (a)
OneToMany
-- 36
  • 73 (a)
OneToMany
-- 36
  • 71 (a)
OneToMany
-- 36
  • 72 (a)
OneToMany
-- 36
  • 77 (a)
OneToMany
dog
(Canis familiaris)
Mammalia LOC100685567 35
  • 83.87 (n)
  • 83.87 (a)
OR5W2 36
  • 83 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Olfr1151 35
  • 77.71 (n)
  • 79.87 (a)
Olfr1151 16
Olfr1131 36
  • 78 (a)
OneToMany
Olfr1132 36
  • 79 (a)
OneToMany
Olfr1135 36
  • 76 (a)
OneToMany
Olfr1136 36
  • 71 (a)
OneToMany
Olfr1137 36
  • 73 (a)
OneToMany
Olfr1138 36
  • 78 (a)
OneToMany
Olfr1140 36
  • 72 (a)
OneToMany
Olfr1141 36
  • 67 (a)
OneToMany
Olfr1143 36
  • 75 (a)
OneToMany
Olfr1151 36
  • 80 (a)
OneToMany
Olfr1152 36
  • 76 (a)
OneToMany
Olfr1153 36
  • 73 (a)
OneToMany
Olfr153 36
  • 78 (a)
OneToMany
chimpanzee
(Pan troglodytes)
Mammalia LOC747267 35
  • 98.71 (n)
  • 98.39 (a)
OR5W2 36
  • 98 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Olr596 35
  • 77.81 (n)
  • 79.87 (a)
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 72 (a)
OneToMany
-- 36
  • 72 (a)
OneToMany
-- 36
  • 72 (a)
OneToMany
Species with no ortholog for OR5W2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR5W2 Gene

ENSEMBL:
Gene Tree for OR5W2 (if available)
TreeFam:
Gene Tree for OR5W2 (if available)

Paralogs for OR5W2 Gene

Paralogs for OR5W2 Gene

(428) SIMAP similar genes for OR5W2 Gene using alignment to 1 proteins:

Pseudogenes.org Pseudogenes for OR5W2 Gene

genes like me logo Genes that share paralogs with OR5W2: view

Variants for OR5W2 Gene

Sequence variations from dbSNP and Humsavar for OR5W2 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs17148883 - 55,914,096(+) GAAGG(C/G)CAGTG reference, missense
rs2457239 - 55,914,018(-) TCTCT(C/T)GCTCA reference, missense
rs17511797 - 55,914,466(+) GCTGA(G/T)AAATT reference, missense
rs12419022 - 55,914,389(+) ACAGA(C/T)GACTG reference, missense
rs17596519 - 55,914,104(+) GTGTC(A/G)TATGT reference, missense

Structural Variations from Database of Genomic Variants (DGV) for OR5W2 Gene

Variant ID Type Subtype PubMed ID
esv2751030 CNV Gain 17911159
nsv821668 CNV Loss 15273396
nsv832158 CNV Gain 17160897
nsv437718 CNV Loss 16327808

Variation tolerance for OR5W2 Gene

Residual Variation Intolerance Score: 78.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 7.91; 83.82% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Relevant External Links for OR5W2 Gene

Disorders for OR5W2 Gene

Relevant External Links for OR5W2

Genetic Association Database (GAD)
OR5W2
Human Genome Epidemiology (HuGE) Navigator
OR5W2
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
OR5W2

No disorders were found for OR5W2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR5W2 Gene

Publications for OR5W2 Gene

  1. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 48 67
  2. The human olfactory receptor gene family. (PMID: 14983052) Malnic B. … Buck L.B. (Proc. Natl. Acad. Sci. U.S.A. 2004) 3
  3. DEFOG: a practical scheme for deciphering families of genes. (PMID: 12213199) Fuchs T. … Shamir R. (Genomics 2002) 3

Products for OR5W2 Gene

Sources for OR5W2 Gene

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