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Aliases for OR5E1P Gene

Aliases for OR5E1P Gene

  • Olfactory Receptor Family 5 Subfamily E Member 1 Pseudogene 2 3 5
  • Olfactory Receptor, Family 5, Subfamily E, Member 1 Pseudogene 2
  • Olfactory Receptor, Family 5, Subfamily R, Member 1 Pseudogene 3
  • Seven Transmembrane Helix Receptor 3
  • HSTPCR24 3
  • TPCR24 3
  • OR5E1 3

External Ids for OR5E1P Gene

Previous HGNC Symbols for OR5E1P Gene

  • OR5E1

Previous GeneCards Identifiers for OR5E1P Gene

  • GC11U990215
  • GC11M008331
  • GC11P007829
  • GC11P007834

Summaries for OR5E1P Gene

Entrez Gene Summary for OR5E1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR5E1P Gene

OR5E1P (Olfactory Receptor Family 5 Subfamily E Member 1 Pseudogene) is a Pseudogene.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR5E1P Gene

Genomics for OR5E1P Gene

Regulatory Elements for OR5E1P Gene

Enhancers for OR5E1P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F007857 0.2 ENCODE 0.4 +9.4 9448 0.4 LOC283299 OR5E1P ENSG00000271758
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OR5E1P on UCSC Golden Path with GeneCards custom track

Genomic Location for OR5E1P Gene

Chromosome:
11
Start:
7,848,700 bp from pter
End:
7,849,632 bp from pter
Size:
933 bases
Orientation:
Plus strand

Genomic View for OR5E1P Gene

Genes around OR5E1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR5E1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR5E1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR5E1P Gene

Proteins for OR5E1P Gene

Post-translational modifications for OR5E1P Gene

No Post-translational modifications

Other Protein References for OR5E1P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR5E1P Gene

Domains & Families for OR5E1P Gene

Gene Families for OR5E1P Gene

Suggested Antigen Peptide Sequences for OR5E1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR5E1P: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for OR5E1P Gene

Function for OR5E1P Gene

Animal Model Products

miRNA for OR5E1P Gene

miRTarBase miRNAs that target OR5E1P

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for OR5E1P Gene

Localization for OR5E1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OR5E1P Gene

Pathways & Interactions for OR5E1P Gene

SuperPathways for OR5E1P Gene

No Data Available

Interacting Proteins for OR5E1P Gene

Gene Ontology (GO) - Biological Process for OR5E1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR5E1P Gene

Transcripts for OR5E1P Gene

mRNA/cDNA for OR5E1P Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR5E1P Gene

No ASD Table

Relevant External Links for OR5E1P Gene

GeneLoc Exon Structure for
OR5E1P
ECgene alternative splicing isoforms for
OR5E1P

Expression for OR5E1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OR5E1P Gene

mRNA differential expression in normal tissues according to GTEx for OR5E1P Gene

This gene is overexpressed in Testis (x33.4) and Skin - Not Sun Exposed (Suprapubic) (x4.9).

NURSA nuclear receptor signaling pathways regulating expression of OR5E1P Gene:

OR5E1P

SOURCE GeneReport for Unigene cluster for OR5E1P Gene:

Hs.382973
genes like me logo Genes that share expression patterns with OR5E1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for OR5E1P Gene

Orthologs for OR5E1P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR5E1P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Or5e1 55 Olfr513
  • chr7:108,754,858-108,755,784
Species where no ortholog for OR5E1P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR5E1P Gene

ENSEMBL:
Gene Tree for OR5E1P (if available)
TreeFam:
Gene Tree for OR5E1P (if available)

Paralogs for OR5E1P Gene

(418) SIMAP similar genes for OR5E1P Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with OR5E1P: view

No data available for Paralogs for OR5E1P Gene

Variants for OR5E1P Gene

Sequence variations from dbSNP and Humsavar for OR5E1P Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs11041601 -- 7,849,084(+) GCAAC(C/G)CCCTG nc-transcript-variant
rs111306384 -- 7,847,341(+) GAAAA(A/G)AAAAA upstream-variant-2KB
rs112000330 -- 7,847,666(+) ATCCA(C/T)GTGTT upstream-variant-2KB
rs114148104 -- 7,849,823(+) ATTAT(A/C)GTGAA downstream-variant-500B
rs114802163 -- 7,848,678(+) CTTAT(A/T)TTTTG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for OR5E1P Gene

Variant ID Type Subtype PubMed ID
dgv1633n54 CNV loss 21841781
esv3579351 CNV loss 25503493
esv3625303 CNV gain 21293372
esv3891927 CNV loss 25118596
nsv1037036 CNV loss 25217958
nsv1044303 CNV loss 25217958
nsv1049085 CNV gain 25217958
nsv499766 OTHER inversion 21111241
nsv553409 CNV loss 21841781
nsv7215 OTHER inversion 18451855
nsv7662 CNV insertion 18451855

Relevant External Links for OR5E1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR5E1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for OR5E1P Gene

Disorders for OR5E1P Gene

Relevant External Links for OR5E1P

Genetic Association Database (GAD)
OR5E1P
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
OR5E1P

No disorders were found for OR5E1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR5E1P Gene

Publications for OR5E1P Gene

  1. Specific repertoire of olfactory receptor genes in the male germ cells of several mammalian species. (PMID: 9119360) Vanderhaeghen P. … Parmentier M. (Genomics 1997) 2 3 64
  2. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 46 64
  3. New GPCRs from a human lingual cDNA library. (PMID: 11705801) Gaudin J.-C. … Haertle T. (Chem. Senses 2001) 3 64

Products for OR5E1P Gene

Sources for OR5E1P Gene

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