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Aliases for OR5E1P Gene

Aliases for OR5E1P Gene

  • Olfactory Receptor, Family 5, Subfamily E, Member 1 Pseudogene 2 3
  • Olfactory Receptor, Family 5, Subfamily R, Member 1 Pseudogene 3
  • Seven Transmembrane Helix Receptor 3
  • HSTPCR24 3
  • TPCR24 3
  • OR5E1 3

External Ids for OR5E1P Gene

Previous HGNC Symbols for OR5E1P Gene

  • OR5E1

Previous GeneCards Identifiers for OR5E1P Gene

  • GC11U990215
  • GC11M008331
  • GC11P007829
  • GC11P007834

Summaries for OR5E1P Gene

Entrez Gene Summary for OR5E1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR5E1P Gene

OR5E1P (Olfactory Receptor, Family 5, Subfamily E, Member 1 Pseudogene) is a Pseudogene. Among its related pathways are GPCRs, Other.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR5E1P Gene

Genomics for OR5E1P Gene

Genomic Location for OR5E1P Gene

Start:
7,848,700 bp from pter
End:
7,849,626 bp from pter
Size:
927 bases
Orientation:
Plus strand

Genomic View for OR5E1P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for OR5E1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR5E1P Gene

No data available for Regulatory Elements for OR5E1P Gene

Proteins for OR5E1P Gene

Post-translational modifications for OR5E1P Gene

No Post-translational modifications

Other Protein References for OR5E1P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR5E1P Gene

Domains for OR5E1P Gene

Gene Families for OR5E1P Gene

HGNC:
  • OR5 :GPCR / Class A : Olfactory receptors

Suggested Antigen Peptide Sequences for OR5E1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR5E1P: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for OR5E1P Gene

Function for OR5E1P Gene

miRNA for OR5E1P Gene

miRTarBase miRNAs that target OR5E1P

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for OR5E1P Gene

Localization for OR5E1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OR5E1P Gene

Pathways for OR5E1P Gene

SuperPathways for OR5E1P Gene

Superpath Contained pathways
1 GPCRs, Other
genes like me logo Genes that share pathways with OR5E1P: view

Pathways by source for OR5E1P Gene

1 BioSystems pathway for OR5E1P Gene

Interacting Proteins for OR5E1P Gene

Gene Ontology (GO) - Biological Process for OR5E1P Gene

None

Transcripts for OR5E1P Gene

mRNA/cDNA for OR5E1P Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for OR5E1P

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for OR5E1P Gene

No ASD Table

Relevant External Links for OR5E1P Gene

GeneLoc Exon Structure for
OR5E1P
ECgene alternative splicing isoforms for
OR5E1P

Expression for OR5E1P Gene

mRNA expression in normal human tissues for OR5E1P Gene

mRNA differential expression in normal tissues according to GTEx for OR5E1P Gene

This gene is overexpressed in Testis (33.4) and Skin - Not Sun Exposed (Suprapubic) (4.9).

SOURCE GeneReport for Unigene cluster for OR5E1P Gene Hs.382973

genes like me logo Genes that share expressions with OR5E1P: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for OR5E1P Gene

Orthologs for OR5E1P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR5E1P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Olfr513 16
Species with no ortholog for OR5E1P:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR5E1P Gene

ENSEMBL:
Gene Tree for OR5E1P (if available)
TreeFam:
Gene Tree for OR5E1P (if available)

Paralogs for OR5E1P Gene

Selected SIMAP similar genes for OR5E1P Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with OR5E1P: view

No data available for Paralogs for OR5E1P Gene

Variants for OR5E1P Gene

Sequence variations from dbSNP and Humsavar for OR5E1P Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs383999 -- 7,849,230(-) CAGTA(A/G)AAGTG nc-transcript-variant
rs393912 -- 7,848,895(-) TGCCA(C/G)GTGAC upstream-variant-2KB
rs1994123 -- 7,848,201(+) GTGAA(C/T)GAGAA upstream-variant-2KB
rs4758022 -- 7,849,464(+) ACACT(A/G)TTTTT nc-transcript-variant
rs7118721 -- 7,847,235(+) ctcaa(A/G)gtact upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for OR5E1P Gene

Variant ID Type Subtype PubMed ID
nsv7215 OTHER Inversion 18451855
nsv499766 OTHER Inversion 21111241
nsv896977 CNV Loss 21882294
nsv896979 CNV Gain 21882294
nsv7662 CNV Insertion 18451855

Relevant External Links for OR5E1P Gene

HapMap Linkage Disequilibrium report
OR5E1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for OR5E1P Gene

Disorders for OR5E1P Gene

Relevant External Links for OR5E1P

Genetic Association Database (GAD)
OR5E1P
genes like me logo Genes that share disorders with OR5E1P: view

No data available for UniProtKB/Swiss-Prot for OR5E1P Gene

Publications for OR5E1P Gene

  1. Specific repertoire of olfactory receptor genes in the male germ cells of several mammalian species. (PMID: 9119360) Vanderhaeghen P. … Parmentier M. (Genomics 1997) 2 3
  2. New GPCRs from a human lingual cDNA library. (PMID: 11705801) Gaudin J.-C. … Haertle T. (Chem. Senses 2001) 3
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 48

Products for OR5E1P Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate OR5E1P
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for OR5E1P
    • Block miRNA regulation of OR5E1P using miScript Target Protectors

    Sources for OR5E1P Gene

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