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Aliases for OR5D3P Gene

Aliases for OR5D3P Gene

  • Olfactory Receptor Family 5 Subfamily D Member 3 Pseudogene 2 3
  • Olfactory Receptor, Family 5, Subfamily D, Member 3 Pseudogene 2
  • Olfactory Receptor, Family 5, Subfamily D, Member 4 3
  • Olfactory Receptor OR11-140 3
  • AP006437.1 5
  • OR11-8b 3
  • OR11-8c 3
  • OR5D3 3
  • OR5D4 3

External Ids for OR5D3P Gene

Previous HGNC Symbols for OR5D3P Gene

  • OR5D3
  • OR5D4

Previous GeneCards Identifiers for OR5D3P Gene

  • GC11U990175
  • GC11M057006
  • GC11P055269
  • GC11P055250
  • GC11P055493

Summaries for OR5D3P Gene

Entrez Gene Summary for OR5D3P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR5D3P Gene

OR5D3P (Olfactory Receptor Family 5 Subfamily D Member 3 Pseudogene) is a Pseudogene. Among its related pathways are GPCRs, Other.

Additional gene information for OR5D3P Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR5D3P Gene

Genomics for OR5D3P Gene

Genomic Location for OR5D3P Gene

Chromosome:
11
Start:
55,723,776 bp from pter
End:
55,729,621 bp from pter
Size:
5,846 bases
Orientation:
Plus strand

Genomic View for OR5D3P Gene

Genes around OR5D3P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR5D3P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR5D3P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR5D3P Gene

No data available for Regulatory Elements for OR5D3P Gene

Proteins for OR5D3P Gene

Post-translational modifications for OR5D3P Gene

No Post-translational modifications

Other Protein References for OR5D3P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR5D3P Gene

Domains & Families for OR5D3P Gene

Gene Families for OR5D3P Gene

Suggested Antigen Peptide Sequences for OR5D3P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR5D3P: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for OR5D3P Gene

Function for OR5D3P Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for OR5D3P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR5D3P Gene

Localization for OR5D3P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OR5D3P Gene

Pathways & Interactions for OR5D3P Gene

SuperPathways for OR5D3P Gene

SuperPathway Contained pathways
1 GPCRs, Other
genes like me logo Genes that share pathways with OR5D3P: view

Pathways by source for OR5D3P Gene

1 BioSystems pathway for OR5D3P Gene

Interacting Proteins for OR5D3P Gene

Gene Ontology (GO) - Biological Process for OR5D3P Gene

None

No data available for SIGNOR curated interactions for OR5D3P Gene

Drugs & Compounds for OR5D3P Gene

No Compound Related Data Available

Transcripts for OR5D3P Gene

mRNA/cDNA for OR5D3P Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for OR5D3P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for OR5D3P Gene

No ASD Table

Relevant External Links for OR5D3P Gene

GeneLoc Exon Structure for
OR5D3P
ECgene alternative splicing isoforms for
OR5D3P

Expression for OR5D3P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR5D3P Gene

NURSA nuclear receptor signaling pathways regulating expression of OR5D3P Gene:

OR5D3P
genes like me logo Genes that share expression patterns with OR5D3P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR5D3P Gene

Orthologs for OR5D3P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR5D3P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Or5d3-ps 52 Olfr1177-ps1
  • chr2:88,343,795-88,344,730
Or5d44-ps 52 Olfr1174-ps1
  • chr2:88,310,835-88,311,773
Or5d45-ps 52 Olfr1175-ps1
  • chr2:88,322,744-88,323,676
Species where no ortholog for OR5D3P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR5D3P Gene

ENSEMBL:
Gene Tree for OR5D3P (if available)
TreeFam:
Gene Tree for OR5D3P (if available)

Paralogs for OR5D3P Gene

No data available for Paralogs for OR5D3P Gene

Variants for OR5D3P Gene

Relevant External Links for OR5D3P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR5D3P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR5D3P Gene

Disorders for OR5D3P Gene

Relevant External Links for OR5D3P

Genetic Association Database (GAD)
OR5D3P

No disorders were found for OR5D3P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR5D3P Gene

Publications for OR5D3P Gene

  1. The human olfactory receptor gene family. (PMID: 14983052) Malnic B … Buck LB (Proceedings of the National Academy of Sciences of the United States of America 2004) 3 60
  2. DEFOG: a practical scheme for deciphering families of genes. (PMID: 12213199) Fuchs T … Shamir R (Genomics 2002) 3 60
  3. Organization and evolution of olfactory receptor genes on human chromosome 11. (PMID: 9787077) Buettner JA … Evans GA (Genomics 1998) 3 60

Products for OR5D3P Gene

Sources for OR5D3P Gene

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