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Aliases for OR5BS1P Gene

Aliases for OR5BS1P Gene

  • Olfactory Receptor Family 5 Subfamily BS Member 1 Pseudogene 2 3
  • Olfactory Receptor, Family 5, Subfamily BS, Member 1 Pseudogene 2
  • AC089987.2 5
  • OR5BS1 3

External Ids for OR5BS1P Gene

Previous HGNC Symbols for OR5BS1P Gene

  • OR5BS1

Previous GeneCards Identifiers for OR5BS1P Gene

  • GC12P047240
  • GC12P047241
  • GC12P048954

Summaries for OR5BS1P Gene

Entrez Gene Summary for OR5BS1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR5BS1P Gene

OR5BS1P (Olfactory Receptor Family 5 Subfamily BS Member 1 Pseudogene) is a Pseudogene.

Additional gene information for OR5BS1P Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR5BS1P Gene

Genomics for OR5BS1P Gene

Regulatory Elements for OR5BS1P Gene

Enhancers for OR5BS1P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H049344 1.7 FANTOM5 Ensembl ENCODE 14.6 +786.9 786943 4 HDGF FOXA2 MLX ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF143 CCNT1 KANSL2 DDX23 LOC390314 KMT2D LIMA1 RPL35AP28 OR11M1P OR5BS1P LALBA
GH12H049055 1.7 FANTOM5 ENCODE dbSUPER 14.6 +498.6 498621 6 FEZF1 DMAP1 YY1 ZNF416 ZNF143 ZNF548 SP3 NFYC ZFP41 MEF2D DDX23 LOC390314 LMBR1L CCNT1 KANSL2 KMT2D SENP1 LOC100422296 PRPF40B OR5BK1P
GH12H048714 1.4 ENCODE dbSUPER 14.7 +156.6 156575 3 MLX DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC MEF2D SSRP1 ZNF610 KANSL2 DDX23 LMBR1L SENP1 KMT2D CCNT1 LOC390314 CCDC184 OR11M1P LALBA
GH12H049296 1.3 Ensembl ENCODE 14.6 +737.3 737257 2 PKNOX1 ATF1 GLI4 ZNF2 ZNF121 GLIS2 ZNF302 ZNF143 KLF7 ZNF548 LIMA1 LOC100422296 BCDIN3D ENSG00000257298 OR5BK1P CCNT1 DDX23 KANSL2 RPL35AP28 OR11M1P
GH12H048956 1.1 ENCODE 14.6 +396.9 396937 2 HDGF PKNOX1 ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF143 ZNF207 ZNF548 CCNT1 KANSL2 LMBR1L LOC390314 DDX23 KMT2D SENP1 PRPF40B LOC101927267 CCDC65
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OR5BS1P on UCSC Golden Path with GeneCards custom track

Genomic Location for OR5BS1P Gene

Chromosome:
12
Start:
48,559,882 bp from pter
End:
48,562,956 bp from pter
Size:
3,075 bases
Orientation:
Plus strand

Genomic View for OR5BS1P Gene

Genes around OR5BS1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR5BS1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR5BS1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR5BS1P Gene

Proteins for OR5BS1P Gene

Post-translational modifications for OR5BS1P Gene

No Post-translational modifications

Other Protein References for OR5BS1P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR5BS1P Gene

Domains & Families for OR5BS1P Gene

Gene Families for OR5BS1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR5BS1P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR5BS1P Gene

Function for OR5BS1P Gene

Phenotypes From GWAS Catalog for OR5BS1P Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for OR5BS1P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR5BS1P Gene

Localization for OR5BS1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OR5BS1P Gene

Pathways & Interactions for OR5BS1P Gene

SuperPathways for OR5BS1P Gene

No Data Available

Interacting Proteins for OR5BS1P Gene

Gene Ontology (GO) - Biological Process for OR5BS1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR5BS1P Gene

Drugs & Compounds for OR5BS1P Gene

No Compound Related Data Available

Transcripts for OR5BS1P Gene

mRNA/cDNA for OR5BS1P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for OR5BS1P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for OR5BS1P Gene

No ASD Table

Relevant External Links for OR5BS1P Gene

GeneLoc Exon Structure for
OR5BS1P
ECgene alternative splicing isoforms for
OR5BS1P

Expression for OR5BS1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR5BS1P Gene

NURSA nuclear receptor signaling pathways regulating expression of OR5BS1P Gene:

OR5BS1P
genes like me logo Genes that share expression patterns with OR5BS1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR5BS1P Gene

Orthologs for OR5BS1P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR5BS1P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Or14s1-ps 52 Olfr758-ps1
  • chr17:37,387,374-37,387,980
Or5bs2-ps 52 Olfr240-ps1
  • chr15:98,471,419-98,472,174
Species where no ortholog for OR5BS1P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR5BS1P Gene

ENSEMBL:
Gene Tree for OR5BS1P (if available)
TreeFam:
Gene Tree for OR5BS1P (if available)

Paralogs for OR5BS1P Gene

No data available for Paralogs for OR5BS1P Gene

Variants for OR5BS1P Gene

Relevant External Links for OR5BS1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR5BS1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR5BS1P Gene

Disorders for OR5BS1P Gene

No disorders were found for OR5BS1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR5BS1P Gene

Publications for OR5BS1P Gene

No publications were found for OR5BS1P Gene.

Products for OR5BS1P Gene

Sources for OR5BS1P Gene

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