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Aliases for OR5BK1P Gene

Subcategory (RNA class) for OR5BK1P Gene

lncRNA

Aliases for OR5BK1P Gene

  • Olfactory Receptor Family 5 Subfamily BK Member 1 Pseudogene 2 3 5
  • Olfactory Receptor, Family 5, Subfamily BK, Member 1 Pseudogene 2

External Ids for OR5BK1P Gene

ORGUL Members for OR5BK1P Gene

Previous GeneCards Identifiers for OR5BK1P Gene

  • GC12U990174
  • GC12M047031
  • GC12M047035
  • GC12M048749

Summaries for OR5BK1P Gene

Entrez Gene Summary for OR5BK1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR5BK1P Gene

OR5BK1P (Olfactory Receptor Family 5 Subfamily BK Member 1 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for OR5BK1P Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR5BK1P Gene

Genomics for OR5BK1P Gene

Regulatory Elements for OR5BK1P Gene

Enhancers for OR5BK1P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H049129 1.5 ENCODE dbSUPER 39.5 -774.8 -774753 4 MLX FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF416 ZNF143 ZNF548 SP3 DDX23 SMARCD1 LMBR1L LOC390314 KMT2D BCDIN3D PRPF40B KANSL2 CCNT1 LOC100422296
GH12H049055 1.7 FANTOM5 ENCODE dbSUPER 31.2 -701.9 -701889 6 FEZF1 DMAP1 YY1 ZNF416 ZNF143 ZNF548 SP3 NFYC ZFP41 MEF2D DDX23 LOC390314 LMBR1L CCNT1 KANSL2 KMT2D SENP1 LOC100422296 PRPF40B OR5BK1P
GH12H047704 1.4 FANTOM5 ENCODE 21 +650.3 650275 2 HDGF ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF207 ZNF143 FOS OR5BK1P ENSG00000257433 VDR SLC48A1 RAPGEF3 H1FNT HDAC7 SENP1 ASB8 ENSG00000205537
GH12H049296 1.3 Ensembl ENCODE 19.6 -940.5 -940525 2 PKNOX1 ATF1 GLI4 ZNF2 ZNF121 GLIS2 ZNF302 ZNF143 KLF7 ZNF548 LIMA1 LOC100422296 BCDIN3D ENSG00000257298 OR5BK1P CCNT1 DDX23 KANSL2 RPL35AP28 OR11M1P
GH12H048865 1.1 ENCODE 21.8 -509.6 -509617 2 HDGF PKNOX1 FOXA2 ZFP64 ARID4B SIN3A FEZF1 ZNF2 YY1 SLC30A9 DDX23 KMT2D KANSL2 LOC390314 CCNT1 LMBR1L SENP1 BCDIN3D PRPF40B ENSG00000257964
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OR5BK1P on UCSC Golden Path with GeneCards custom track

Genomic Location for OR5BK1P Gene

Chromosome:
12
Start:
48,355,659 bp from pter
End:
48,356,614 bp from pter
Size:
956 bases
Orientation:
Minus strand

Genomic View for OR5BK1P Gene

Genes around OR5BK1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR5BK1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR5BK1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR5BK1P Gene

Proteins for OR5BK1P Gene

Post-translational modifications for OR5BK1P Gene

No Post-translational modifications

Other Protein References for OR5BK1P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR5BK1P Gene

Domains & Families for OR5BK1P Gene

Gene Families for OR5BK1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR5BK1P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR5BK1P Gene

Function for OR5BK1P Gene

Phenotypes From GWAS Catalog for OR5BK1P Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for OR5BK1P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR5BK1P Gene

Localization for OR5BK1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OR5BK1P Gene

Pathways & Interactions for OR5BK1P Gene

SuperPathways for OR5BK1P Gene

No Data Available

Interacting Proteins for OR5BK1P Gene

Gene Ontology (GO) - Biological Process for OR5BK1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR5BK1P Gene

Drugs & Compounds for OR5BK1P Gene

No Compound Related Data Available

Transcripts for OR5BK1P Gene

mRNA/cDNA for OR5BK1P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for OR5BK1P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for OR5BK1P Gene

No ASD Table

Relevant External Links for OR5BK1P Gene

GeneLoc Exon Structure for
OR5BK1P
ECgene alternative splicing isoforms for
OR5BK1P

Expression for OR5BK1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR5BK1P Gene

NURSA nuclear receptor signaling pathways regulating expression of OR5BK1P Gene:

OR5BK1P
genes like me logo Genes that share expression patterns with OR5BK1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR5BK1P Gene

Orthologs for OR5BK1P Gene

Evolution for OR5BK1P Gene

ENSEMBL:
Gene Tree for OR5BK1P (if available)
TreeFam:
Gene Tree for OR5BK1P (if available)

No data available for Orthologs for OR5BK1P Gene

Paralogs for OR5BK1P Gene

No data available for Paralogs for OR5BK1P Gene

Variants for OR5BK1P Gene

Relevant External Links for OR5BK1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR5BK1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR5BK1P Gene

Disorders for OR5BK1P Gene

No disorders were found for OR5BK1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR5BK1P Gene

Publications for OR5BK1P Gene

No publications were found for OR5BK1P Gene.

Products for OR5BK1P Gene

Sources for OR5BK1P Gene

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