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Aliases for OR5BK1P Gene

Subcategory (RNA class) for OR5BK1P Gene

lncRNA

Aliases for OR5BK1P Gene

  • Olfactory Receptor Family 5 Subfamily BK Member 1 Pseudogene 2 3 5
  • Olfactory Receptor, Family 5, Subfamily BK, Member 1 Pseudogene 2

External Ids for OR5BK1P Gene

ORGUL Members for OR5BK1P Gene

Previous GeneCards Identifiers for OR5BK1P Gene

  • GC12U990174
  • GC12M047031
  • GC12M047035
  • GC12M048749

Summaries for OR5BK1P Gene

Entrez Gene Summary for OR5BK1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR5BK1P Gene

OR5BK1P (Olfactory Receptor Family 5 Subfamily BK Member 1 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR5BK1P Gene

Genomics for OR5BK1P Gene

Regulatory Elements for OR5BK1P Gene

Enhancers for OR5BK1P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F048865 1.4 Ensembl ENCODE 21.5 -509.7 -509716 2.4 PKNOX1 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 ZNF2 YY1 SLC30A9 FOS DDX23 LOC390314 KANSL2 CCNT1 BCDIN3D SENP1 ENSG00000257964 PRPF40B LOC100422296 LOC101927267
GH12F049055 1.5 FANTOM5 ENCODE 13 -701.9 -701889 6.7 CREB3L1 FEZF1 DMAP1 YY1 ZNF416 ZNF143 ZNF548 ZNF263 SP3 NFYC DDX23 LOC390314 CCNT1 KANSL2 PRPF40B SENP1 LOC100422296 ENSG00000257964 DDN LOC101927267
GH12F048104 1.2 ENCODE 13.1 +250.3 250325 4.1 PKNOX1 ARNT CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 DDX23 KANSL2 RPL37P19 CCNT1 LOC390314 SENP1 CACNB3 RPAP3 CCDC184 PRKAG1
GH12F049129 1.2 ENCODE 13 -774.8 -774753 4.6 CREB3L1 MLX YBX1 FEZF1 DMAP1 YY1 SLC30A9 ZNF416 ZNF143 ZNF548 DDX23 LOC390314 PRPF40B CCNT1 BCDIN3D KANSL2 ENSG00000257964 LOC100422296 LOC105369760 CCDC184
GH12F048175 1.1 Ensembl ENCODE 13.3 +180.5 180486 0.7 SIX4 TBP HDAC1 LEF1 ATF1 NFRKB POLR2A GATA2 SCRT2 TRIM24 OR5BK1P LOC100533659 ASB8
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OR5BK1P on UCSC Golden Path with GeneCards custom track

Genomic Location for OR5BK1P Gene

Chromosome:
12
Start:
48,355,659 bp from pter
End:
48,356,614 bp from pter
Size:
956 bases
Orientation:
Minus strand

Genomic View for OR5BK1P Gene

Genes around OR5BK1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR5BK1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR5BK1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR5BK1P Gene

Proteins for OR5BK1P Gene

Post-translational modifications for OR5BK1P Gene

No Post-translational modifications

Other Protein References for OR5BK1P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR5BK1P Gene

Domains & Families for OR5BK1P Gene

Gene Families for OR5BK1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR5BK1P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR5BK1P Gene

Function for OR5BK1P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR5BK1P Gene

Localization for OR5BK1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OR5BK1P Gene

Pathways & Interactions for OR5BK1P Gene

SuperPathways for OR5BK1P Gene

No Data Available

Interacting Proteins for OR5BK1P Gene

Gene Ontology (GO) - Biological Process for OR5BK1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR5BK1P Gene

Transcripts for OR5BK1P Gene

mRNA/cDNA for OR5BK1P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR5BK1P Gene

No ASD Table

Relevant External Links for OR5BK1P Gene

GeneLoc Exon Structure for
OR5BK1P
ECgene alternative splicing isoforms for
OR5BK1P

Expression for OR5BK1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OR5BK1P Gene

NURSA nuclear receptor signaling pathways regulating expression of OR5BK1P Gene:

OR5BK1P
genes like me logo Genes that share expression patterns with OR5BK1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for OR5BK1P Gene

Orthologs for OR5BK1P Gene

Evolution for OR5BK1P Gene

ENSEMBL:
Gene Tree for OR5BK1P (if available)
TreeFam:
Gene Tree for OR5BK1P (if available)

No data available for Orthologs for OR5BK1P Gene

Paralogs for OR5BK1P Gene

No data available for Paralogs for OR5BK1P Gene

Variants for OR5BK1P Gene

Relevant External Links for OR5BK1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR5BK1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR5BK1P Gene

Disorders for OR5BK1P Gene

No disorders were found for OR5BK1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR5BK1P Gene

Publications for OR5BK1P Gene

No publications were found for OR5BK1P Gene.

Products for OR5BK1P Gene

Sources for OR5BK1P Gene

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