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Aliases for OR5BK1P Gene

Subcategory (RNA class) for OR5BK1P Gene

lncRNA

Aliases for OR5BK1P Gene

  • Olfactory Receptor Family 5 Subfamily BK Member 1 Pseudogene 2 3 5
  • Olfactory Receptor, Family 5, Subfamily BK, Member 1 Pseudogene 2

External Ids for OR5BK1P Gene

ORGUL Members for OR5BK1P Gene

Previous GeneCards Identifiers for OR5BK1P Gene

  • GC12U990174
  • GC12M047031
  • GC12M047035
  • GC12M048749

Summaries for OR5BK1P Gene

Entrez Gene Summary for OR5BK1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR5BK1P Gene

OR5BK1P (Olfactory Receptor Family 5 Subfamily BK Member 1 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR5BK1P Gene

Genomics for OR5BK1P Gene

Regulatory Elements for OR5BK1P Gene

Enhancers for OR5BK1P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G049129 1.5 ENCODE dbSUPER 21.6 -774.8 -774753 4.6 MLX CREB3L1 AGO1 DMAP1 YBX1 FEZF1 YY1 SLC30A9 ZNF416 ZNF143 LOC390314 DDX23 CCNT1 KANSL2 PRPF40B LOC105369760 BCDIN3D OR5BK1P CCDC184 LOC100422296
GH12G048865 1.1 ENCODE 21.5 -509.6 -509617 2.2 HDGF PKNOX1 FOXA2 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 ZNF2 YY1 KANSL2 LOC390314 DDX23 PRPF40B LOC100422296 CCNT1 ENSG00000257964 SENP1 BCDIN3D-AS1 CCDC184
GH12G049055 1.8 FANTOM5 ENCODE dbSUPER 13 -701.9 -701889 6.7 CREB3L1 AGO1 FEZF1 DMAP1 YY1 ZNF416 ZNF143 ZNF548 ZNF263 SP3 DDX23 LOC390314 CCNT1 KANSL2 SENP1 PRPF40B DDN LOC100422296 LOC101927267 CCDC184
GH12G047831 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10 +522.3 522287 5.0 HDGF ATF1 TCF12 GATA2 KDM4B MCM3 TBX21 SMARCA4 GLIS1 NBN CCDC184 LOC102725258 CACNB3 OR5BK1P ENSG00000268069 OR10AD1 HDAC7 ENSG00000205537
GH12G048104 1.2 ENCODE 13.1 +250.3 250325 4.1 CREB3L1 AGO1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 RPL37P19 CACNB3 CCDC184 ZNF641 H1FNT OR5BK1P ADCY6 ARF3 RNU6-1203P PRKAG1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OR5BK1P on UCSC Golden Path with GeneCards custom track

Genomic Location for OR5BK1P Gene

Chromosome:
12
Start:
48,355,659 bp from pter
End:
48,356,614 bp from pter
Size:
956 bases
Orientation:
Minus strand

Genomic View for OR5BK1P Gene

Genes around OR5BK1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR5BK1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR5BK1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR5BK1P Gene

Proteins for OR5BK1P Gene

Post-translational modifications for OR5BK1P Gene

No Post-translational modifications

Other Protein References for OR5BK1P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR5BK1P Gene

Domains & Families for OR5BK1P Gene

Gene Families for OR5BK1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR5BK1P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR5BK1P Gene

Function for OR5BK1P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR5BK1P Gene

Localization for OR5BK1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OR5BK1P Gene

Pathways & Interactions for OR5BK1P Gene

SuperPathways for OR5BK1P Gene

No Data Available

Interacting Proteins for OR5BK1P Gene

Gene Ontology (GO) - Biological Process for OR5BK1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR5BK1P Gene

Drugs & Compounds for OR5BK1P Gene

No Compound Related Data Available

Transcripts for OR5BK1P Gene

mRNA/cDNA for OR5BK1P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR5BK1P Gene

No ASD Table

Relevant External Links for OR5BK1P Gene

GeneLoc Exon Structure for
OR5BK1P
ECgene alternative splicing isoforms for
OR5BK1P

Expression for OR5BK1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR5BK1P Gene

NURSA nuclear receptor signaling pathways regulating expression of OR5BK1P Gene:

OR5BK1P
genes like me logo Genes that share expression patterns with OR5BK1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR5BK1P Gene

Orthologs for OR5BK1P Gene

Evolution for OR5BK1P Gene

ENSEMBL:
Gene Tree for OR5BK1P (if available)
TreeFam:
Gene Tree for OR5BK1P (if available)

No data available for Orthologs for OR5BK1P Gene

Paralogs for OR5BK1P Gene

No data available for Paralogs for OR5BK1P Gene

Variants for OR5BK1P Gene

Relevant External Links for OR5BK1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR5BK1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR5BK1P Gene

Disorders for OR5BK1P Gene

No disorders were found for OR5BK1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR5BK1P Gene

Publications for OR5BK1P Gene

No publications were found for OR5BK1P Gene.

Products for OR5BK1P Gene

Sources for OR5BK1P Gene

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