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Aliases for OR5B1P Gene

Subcategory (RNA class) for OR5B1P Gene

lncRNA

Aliases for OR5B1P Gene

  • Olfactory Receptor Family 5 Subfamily B Member 1 Pseudogene 2 3 5
  • Olfactory Receptor, Family 5, Subfamily B, Member 14 Pseudogene 3
  • Olfactory Receptor, Family 5, Subfamily B, Member 1 Pseudogene 2
  • Olfactory Receptor, Family 5, Subfamily B, Member 5 Pseudogene 3
  • Olfactory Receptor, Family 5, Subfamily B, Member 6 Pseudogene 3
  • Olfactory Receptor, Family 5, Subfamily B, Member 7 Pseudogene 3
  • Olfactory Receptor, Family 5, Subfamily B, Member 8 Pseudogene 3
  • Olfactory Receptor, Family 5, Subfamily B, Member 9 Pseudogene 3
  • OR912-92 3
  • OR3-144 3
  • OR8-122 3
  • OR8-123 3
  • OR5B14P 3
  • OR6-55 3
  • OR6-57 3
  • OR5B5P 3
  • OR5B6P 3
  • OR5B7P 3
  • OR5B8P 3
  • OR5B9P 3
  • OR5B5 3
  • OR5B6 3
  • OR5B7 3
  • OR5B8 3
  • OR5B9 3

External Ids for OR5B1P Gene

ORGUL Members for OR5B1P Gene

Previous HGNC Symbols for OR5B1P Gene

  • OR5B9P
  • OR5B9
  • OR5B5P
  • OR5B14P
  • OR5B7P
  • OR5B7
  • OR5B8
  • OR5B8P
  • OR5B5
  • OR5B6
  • OR5B6P

Previous GeneCards Identifiers for OR5B1P Gene

  • GC08U990093
  • GC11M057908
  • GC11M057889
  • GC11M058133

Summaries for OR5B1P Gene

Entrez Gene Summary for OR5B1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR5B1P Gene

OR5B1P (Olfactory Receptor Family 5 Subfamily B Member 1 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR5B1P Gene

Genomics for OR5B1P Gene

Regulatory Elements for OR5B1P Gene

Enhancers for OR5B1P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F057496 1.2 Ensembl ENCODE 16.2 +866.8 866835 6.7 PKNOX1 ARID4B DMAP1 ZNF48 YY1 ZNF121 GLIS2 KLF7 FOS SP3 TIMM10 RPS4XP13 OR5AZ1P OR9Q2 OR5B1P OR5B15P BTBD18 RTN4RL2 RN7SKP259 MIR130A
GH11F057740 0.5 ENCODE 16.2 +624.9 624874 2.7 HDGF PKNOX1 ARNT MLX CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 TNKS1BP1 SSRP1 CTNND1 RPS4XP13 OR5AZ1P OR9Q2 OR5B15P OR5B1P OR5B21 MED19
GH11F057973 0.8 ENCODE 16.2 +392.6 392648 0.5 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 TNKS1BP1 SSRP1 CTNND1 OR5AZ1P OR9Q2 RPS4XP13 OR5B1P OR5B15P OR5B21 BTBD18
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around OR5B1P on UCSC Golden Path with GeneCards custom track

Genomic Location for OR5B1P Gene

Chromosome:
11
Start:
58,365,830 bp from pter
End:
58,366,763 bp from pter
Size:
934 bases
Orientation:
Minus strand

Genomic View for OR5B1P Gene

Genes around OR5B1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR5B1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR5B1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR5B1P Gene

Proteins for OR5B1P Gene

Post-translational modifications for OR5B1P Gene

No Post-translational modifications

Other Protein References for OR5B1P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR5B1P Gene

Domains & Families for OR5B1P Gene

Gene Families for OR5B1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR5B1P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR5B1P Gene

Function for OR5B1P Gene

Molecular function for OR5B1P Gene

GENATLAS Biochemistry:
olfactory receptor,family 5,subfamily B,member 1,pseudogene,G protein coupled receptor superfamily

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR5B1P Gene

Localization for OR5B1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OR5B1P Gene

Pathways & Interactions for OR5B1P Gene

SuperPathways for OR5B1P Gene

No Data Available

Interacting Proteins for OR5B1P Gene

Gene Ontology (GO) - Biological Process for OR5B1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR5B1P Gene

Transcripts for OR5B1P Gene

mRNA/cDNA for OR5B1P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR5B1P Gene

No ASD Table

Relevant External Links for OR5B1P Gene

GeneLoc Exon Structure for
OR5B1P
ECgene alternative splicing isoforms for
OR5B1P

Expression for OR5B1P Gene

mRNA expression in normal human tissues for OR5B1P Gene

NURSA nuclear receptor signaling pathways regulating expression of OR5B1P Gene:

OR5B1P
genes like me logo Genes that share expression patterns with OR5B1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for OR5B1P Gene

Orthologs for OR5B1P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR5B1P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Or5b107 55 Olfr1461
  • chr19:13,164,938-13,165,951
Or5b24 55 Olfr1449
  • chr19:12,934,698-12,935,681
Or5b96 55 Olfr1446
  • chr19:12,889,652-12,890,575
Or5b97 55 Olfr1447
  • chr19:12,900,852-12,901,778
Or5b98 55 Olfr1450
  • chr19:12,953,591-12,954,565
Species where no ortholog for OR5B1P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR5B1P Gene

ENSEMBL:
Gene Tree for OR5B1P (if available)
TreeFam:
Gene Tree for OR5B1P (if available)

Paralogs for OR5B1P Gene

No data available for Paralogs for OR5B1P Gene

Variants for OR5B1P Gene

Relevant External Links for OR5B1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR5B1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR5B1P Gene

Disorders for OR5B1P Gene

No disorders were found for OR5B1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR5B1P Gene

Publications for OR5B1P Gene

  1. Distribution of olfactory receptor genes in the human genome. (PMID: 9500546) Rouquier S. … Giorgi D. (Nat. Genet. 1998) 2 3 64
  2. DEFOG: a practical scheme for deciphering families of genes. (PMID: 12213199) Fuchs T. … Shamir R. (Genomics 2002) 3 64

Products for OR5B1P Gene

Sources for OR5B1P Gene

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