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Aliases for OR5AL1 Gene

Aliases for OR5AL1 Gene

  • Olfactory Receptor Family 5 Subfamily AL Member 1 (Gene/Pseudogene) 2 3 5
  • Olfactory Receptor, Family 5, Subfamily AL, Member 1 Pseudogene 2 3
  • OR5AL1P 3 4
  • Olfactory Receptor, Family 5, Subfamily AL, Member 1 (Gene/Pseudogene) 2
  • Olfactory Receptor OR11-184 4
  • Olfactory Receptor 5AL1 3

External Ids for OR5AL1 Gene

Previous HGNC Symbols for OR5AL1 Gene

  • OR5AL1P

Previous GeneCards Identifiers for OR5AL1 Gene

  • GC11P055937
  • GC11P056181

Summaries for OR5AL1 Gene

Entrez Gene Summary for OR5AL1 Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR5AL1 Gene

OR5AL1 (Olfactory Receptor Family 5 Subfamily AL Member 1 (Gene/Pseudogene)) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Olfactory Signaling Pathway. GO annotations related to this gene include G-protein coupled receptor activity and olfactory receptor activity.

UniProtKB/Swiss-Prot for OR5AL1 Gene

  • Odorant receptor.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR5AL1 Gene

Genomics for OR5AL1 Gene

Genomic Location for OR5AL1 Gene

Chromosome:
11
Start:
56,412,697 bp from pter
End:
56,413,681 bp from pter
Size:
985 bases
Orientation:
Plus strand

Genomic View for OR5AL1 Gene

Genes around OR5AL1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR5AL1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR5AL1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR5AL1 Gene

No data available for Regulatory Elements for OR5AL1 Gene

Proteins for OR5AL1 Gene

  • Protein details for OR5AL1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C617-O5AL1_HUMAN
    Recommended name:
    Olfactory receptor 5AL1
    Protein Accession:
    P0C617

    Protein attributes for OR5AL1 Gene

    Size:
    328 amino acids
    Molecular mass:
    36816 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR5AL1 Gene

Proteomics data for OR5AL1 Gene at MOPED

Post-translational modifications for OR5AL1 Gene

  • Glycosylation at Asn 21
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for OR5AL1 Gene

Domains & Families for OR5AL1 Gene

Gene Families for OR5AL1 Gene

Protein Domains for OR5AL1 Gene

Suggested Antigen Peptide Sequences for OR5AL1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P0C617

UniProtKB/Swiss-Prot:

O5AL1_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR5AL1: view

Function for OR5AL1 Gene

Molecular function for OR5AL1 Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

Gene Ontology (GO) - Molecular Function for OR5AL1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004984 olfactory receptor activity IBA --
genes like me logo Genes that share ontologies with OR5AL1: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR5AL1 Gene

Localization for OR5AL1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR5AL1 Gene

Cell membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for OR5AL1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR5AL1: view

No data available for Subcellular locations from COMPARTMENTS for OR5AL1 Gene

Pathways & Interactions for OR5AL1 Gene

genes like me logo Genes that share pathways with OR5AL1: view

Pathways by source for OR5AL1 Gene

Interacting Proteins for OR5AL1 Gene

Gene Ontology (GO) - Biological Process for OR5AL1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway IBA --
genes like me logo Genes that share ontologies with OR5AL1: view

No data available for SIGNOR curated interactions for OR5AL1 Gene

Drugs & Compounds for OR5AL1 Gene

No Compound Related Data Available

Transcripts for OR5AL1 Gene

mRNA/cDNA for OR5AL1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR5AL1 Gene

No ASD Table

Relevant External Links for OR5AL1 Gene

GeneLoc Exon Structure for
OR5AL1
ECgene alternative splicing isoforms for
OR5AL1

Expression for OR5AL1 Gene

mRNA expression in normal human tissues for OR5AL1 Gene

genes like me logo Genes that share expression patterns with OR5AL1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for OR5AL1 Gene

Orthologs for OR5AL1 Gene

Evolution for OR5AL1 Gene

ENSEMBL:
Gene Tree for OR5AL1 (if available)
TreeFam:
Gene Tree for OR5AL1 (if available)

No data available for Orthologs for OR5AL1 Gene

Paralogs for OR5AL1 Gene

(448) SIMAP similar genes for OR5AL1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with OR5AL1: view

No data available for Paralogs for OR5AL1 Gene

Variants for OR5AL1 Gene

Polymorphic Variants from UniProtKB/Swiss-Prot for OR5AL1 Gene

P0C617-O5AL1_HUMAN
A double nucleotide deletion at position Cys-156 in the gene coding for this protein produces a stop codon which is responsible for functional diversity thus producing a pseudogene.

Relevant External Links for OR5AL1 Gene

HapMap Linkage Disequilibrium report
OR5AL1

No data available for Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR5AL1 Gene

Disorders for OR5AL1 Gene

No disorders were found for OR5AL1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR5AL1 Gene

Publications for OR5AL1 Gene

  1. The human olfactory receptor gene family. (PMID: 14983052) Malnic B. … Buck L.B. (Proc. Natl. Acad. Sci. U.S.A. 2004) 3 4 67
  2. Different noses for different people. (PMID: 12730696) Menashe I. … Gilad Y. (Nat. Genet. 2003) 3
  3. DEFOG: a practical scheme for deciphering families of genes. (PMID: 12213199) Fuchs T. … Shamir R. (Genomics 2002) 3

Products for OR5AL1 Gene

Sources for OR5AL1 Gene

Content