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Aliases for OR5AK4P Gene

Aliases for OR5AK4P Gene

  • Olfactory Receptor, Family 5, Subfamily AK, Member 4 Pseudogene 2 3
  • Olfactory Receptor, Family 5, Subfamily AK, Member 2 Pseudogene 3
  • Olfactory-Like Receptor Pseudogene PJCG3 3
  • PJCG3 3

External Ids for OR5AK4P Gene

Previous GeneCards Identifiers for OR5AK4P Gene

  • GC11U990461
  • GC11P056581
  • GC11P056561
  • GC11P056804

Summaries for OR5AK4P Gene

Entrez Gene Summary for OR5AK4P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR5AK4P Gene

OR5AK4P (Olfactory Receptor, Family 5, Subfamily AK, Member 4 Pseudogene) is a Pseudogene.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR5AK4P Gene

Genomics for OR5AK4P Gene

Genomic Location for OR5AK4P Gene

Start:
57,037,437 bp from pter
End:
57,038,460 bp from pter
Size:
1,024 bases
Orientation:
Plus strand

Genomic View for OR5AK4P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for OR5AK4P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR5AK4P Gene

No data available for Regulatory Elements for OR5AK4P Gene

Proteins for OR5AK4P Gene

Post-translational modifications for OR5AK4P Gene

No Post-translational modifications

Other Protein References for OR5AK4P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR5AK4P Gene

Domains for OR5AK4P Gene

Gene Families for OR5AK4P Gene

HGNC:
  • OR5 :GPCR / Class A : Olfactory receptors

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR5AK4P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR5AK4P Gene

Function for OR5AK4P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for OR5AK4P Gene

Localization for OR5AK4P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OR5AK4P Gene

Pathways for OR5AK4P Gene

SuperPathways for OR5AK4P Gene

No Data Available

Interacting Proteins for OR5AK4P Gene

Gene Ontology (GO) - Biological Process for OR5AK4P Gene

None

No data available for Pathways by source for OR5AK4P Gene

Transcripts for OR5AK4P Gene

mRNA/cDNA for OR5AK4P Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for OR5AK4P

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for OR5AK4P Gene

No ASD Table

Relevant External Links for OR5AK4P Gene

GeneLoc Exon Structure for
OR5AK4P
ECgene alternative splicing isoforms for
OR5AK4P

Expression for OR5AK4P Gene

mRNA expression in normal human tissues for OR5AK4P Gene

SOURCE GeneReport for Unigene cluster for OR5AK4P Gene Hs.554519

genes like me logo Genes that share expressions with OR5AK4P: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for OR5AK4P Gene

Orthologs for OR5AK4P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR5AK4P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Olfr987 16
Species with no ortholog for OR5AK4P:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR5AK4P Gene

ENSEMBL:
Gene Tree for OR5AK4P (if available)
TreeFam:
Gene Tree for OR5AK4P (if available)

Paralogs for OR5AK4P Gene

No data available for Paralogs for OR5AK4P Gene

Variants for OR5AK4P Gene

Sequence variations from dbSNP and Humsavar for OR5AK4P Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs617214 -- 57,037,282(+) TACCC(C/T)GGGAA upstream-variant-2KB
rs617298 -- 57,037,340(+) TAAGC(C/T)GGCTG upstream-variant-2KB
rs3016744 -- 57,036,385(+) TTTTT(G/T)TCAAG upstream-variant-2KB
rs3017322 -- 57,038,636(+) AACTT(C/T)TAATC downstream-variant-500B
rs7950883 -- 57,036,901(+) TGTAT(C/T)GGAGA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for OR5AK4P Gene

Variant ID Type Subtype PubMed ID
nsv832162 CNV Loss 17160897

Relevant External Links for OR5AK4P Gene

HapMap Linkage Disequilibrium report
OR5AK4P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for OR5AK4P Gene

Disorders for OR5AK4P Gene

No disorders were found for OR5AK4P Gene.

No data available for UniProtKB/Swiss-Prot for OR5AK4P Gene

Publications for OR5AK4P Gene

  1. New GPCRs from a human lingual cDNA library. (PMID: 11705801) Gaudin J.-C. … Haertle T. (Chem. Senses 2001) 3
  2. Natural selection on the olfactory receptor gene family in humans and chimpanzees. (PMID: 12908129) Gilad Y. … Paabo S. (Am. J. Hum. Genet. 2003) 3

Products for OR5AK4P Gene

Sources for OR5AK4P Gene

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