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Aliases for OR52U1P Gene

Aliases for OR52U1P Gene

  • Olfactory Receptor Family 52 Subfamily U Member 1 Pseudogene 2 3 5
  • Olfactory Receptor, Family 52, Subfamily U, Member 1 Pseudogene 2

External Ids for OR52U1P Gene

Previous GeneCards Identifiers for OR52U1P Gene

  • GC11U990477

Summaries for OR52U1P Gene

Entrez Gene Summary for OR52U1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR52U1P Gene

OR52U1P (Olfactory Receptor Family 52 Subfamily U Member 1 Pseudogene) is a Pseudogene.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR52U1P Gene

Genomics for OR52U1P Gene

Regulatory Elements for OR52U1P Gene

Enhancers for OR52U1P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F005712 0.7 ENCODE 0.4 -6.6 -6645 0.2 CTCF POLR2A SMC3 RAD21 OR52U1P GC11M005696
GH11F005700 1.2 Ensembl ENCODE 0.3 -18.3 -18347 1.6 GATAD2A HLF CEBPB ZNF644 NFIL3 ADNP ZNF512 HNF4G NBN MLLT1 OR52N4 OR52P1P TRIM22 GC11M005696 OR52U1P
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around OR52U1P on UCSC Golden Path with GeneCards custom track

Genomic Location for OR52U1P Gene

Chromosome:
11
Start:
5,719,290 bp from pter
End:
5,720,266 bp from pter
Size:
977 bases
Orientation:
Plus strand

Genomic View for OR52U1P Gene

Genes around OR52U1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR52U1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR52U1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR52U1P Gene

Proteins for OR52U1P Gene

Post-translational modifications for OR52U1P Gene

No Post-translational modifications

Other Protein References for OR52U1P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR52U1P Gene

Domains & Families for OR52U1P Gene

Gene Families for OR52U1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR52U1P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR52U1P Gene

Function for OR52U1P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR52U1P Gene

Localization for OR52U1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OR52U1P Gene

Pathways & Interactions for OR52U1P Gene

SuperPathways for OR52U1P Gene

No Data Available

Interacting Proteins for OR52U1P Gene

Gene Ontology (GO) - Biological Process for OR52U1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR52U1P Gene

Transcripts for OR52U1P Gene

mRNA/cDNA for OR52U1P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR52U1P Gene

No ASD Table

Relevant External Links for OR52U1P Gene

GeneLoc Exon Structure for
OR52U1P
ECgene alternative splicing isoforms for
OR52U1P

Expression for OR52U1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for OR52U1P Gene

NURSA nuclear receptor signaling pathways regulating expression of OR52U1P Gene:

OR52U1P
genes like me logo Genes that share expression patterns with OR52U1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for OR52U1P Gene

Orthologs for OR52U1P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR52U1P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Or52ac1 55 Olfr655
  • chr7:104,596,256-104,597,179
Or52u1 55 Olfr654
  • chr7:104,587,755-104,588,777
Species where no ortholog for OR52U1P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR52U1P Gene

ENSEMBL:
Gene Tree for OR52U1P (if available)
TreeFam:
Gene Tree for OR52U1P (if available)

Paralogs for OR52U1P Gene

No data available for Paralogs for OR52U1P Gene

Variants for OR52U1P Gene

Relevant External Links for OR52U1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR52U1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR52U1P Gene

Disorders for OR52U1P Gene

No disorders were found for OR52U1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR52U1P Gene

Publications for OR52U1P Gene

No publications were found for OR52U1P Gene.

Products for OR52U1P Gene

Sources for OR52U1P Gene

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