Free for academic non-profit institutions. Other users need a Commercial license

Aliases for OR52K3P Gene

Aliases for OR52K3P Gene

  • Olfactory Receptor Family 52 Subfamily K Member 3 Pseudogene 2 3 5
  • Olfactory Receptor, Family 52, Subfamily K, Member 3 Pseudogene 2

External Ids for OR52K3P Gene

Previous GeneCards Identifiers for OR52K3P Gene

  • GC11U990490
  • GC11M004798
  • GC11P004455
  • GC11P004461
  • GC11P004454
  • GC11P004452

Summaries for OR52K3P Gene

Entrez Gene Summary for OR52K3P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR52K3P Gene

OR52K3P (Olfactory Receptor Family 52 Subfamily K Member 3 Pseudogene) is a Pseudogene.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR52K3P Gene

Genomics for OR52K3P Gene

Regulatory Elements for OR52K3P Gene

Enhancers for OR52K3P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G004458 1.3 FANTOM5 Ensembl ENCODE 27.7 -14.5 -14487 3.7 JUN CEBPG DPF2 FOSL1 ZNF316 JUND ATF3 ZNF692 FOSL2 NFE2 OR52K3P OR52K1 OR52M1 TRIM21 GC11M004470 OR52K2
GH11G004455 1.1 FANTOM5 Ensembl ENCODE 27.6 -19.1 -19146 0.7 CTCF MAX ETV6 MYC OR52K3P OR52K1 TRIM21 OR52K2 GC11M004470
GH11G004464 0.6 ENCODE 28.3 -8.4 -8377 4.9 MTA2 ETV1 EBF1 ATF2 RAD51 POLR2A IKZF1 ZNF547 TRIM28 OR52K3P GC11M004470 OR52K2
GH11G004392 1.2 FANTOM5 ENCODE 12.9 -81.3 -81329 1.7 HDGF PKNOX1 SIN3A DMAP1 GLIS2 ZNF143 ZNF263 SP3 SP5 NCOA1 OR52K3P TRIM21 OR52K2 OR52B3P
GH11G004182 0.8 ENCODE 10.8 -292.5 -292534 0.1 BCOR HDGF CTCF CBX3 RB1 ETV1 MAX RAD21 ZNF143 SMC3 OR52K1 OR52K3P LOC100506082 OR55B1P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OR52K3P on UCSC Golden Path with GeneCards custom track

Genomic Location for OR52K3P Gene

Chromosome:
11
Start:
4,474,809 bp from pter
End:
4,475,756 bp from pter
Size:
948 bases
Orientation:
Plus strand

Genomic View for OR52K3P Gene

Genes around OR52K3P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR52K3P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR52K3P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR52K3P Gene

Proteins for OR52K3P Gene

Post-translational modifications for OR52K3P Gene

No Post-translational modifications

Other Protein References for OR52K3P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR52K3P Gene

Domains & Families for OR52K3P Gene

Gene Families for OR52K3P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR52K3P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR52K3P Gene

Function for OR52K3P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR52K3P Gene

Localization for OR52K3P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OR52K3P Gene

Pathways & Interactions for OR52K3P Gene

SuperPathways for OR52K3P Gene

No Data Available

Interacting Proteins for OR52K3P Gene

Gene Ontology (GO) - Biological Process for OR52K3P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR52K3P Gene

Drugs & Compounds for OR52K3P Gene

No Compound Related Data Available

Transcripts for OR52K3P Gene

mRNA/cDNA for OR52K3P Gene

(1) Additional mRNA sequences :
(9) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for OR52K3P Gene

Olfactory receptor, family 52, subfamily K, member 3 pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for OR52K3P Gene

No ASD Table

Relevant External Links for OR52K3P Gene

GeneLoc Exon Structure for
OR52K3P
ECgene alternative splicing isoforms for
OR52K3P

Expression for OR52K3P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR52K3P Gene

mRNA differential expression in normal tissues according to GTEx for OR52K3P Gene

This gene is overexpressed in Whole Blood (x33.3).

NURSA nuclear receptor signaling pathways regulating expression of OR52K3P Gene:

OR52K3P

SOURCE GeneReport for Unigene cluster for OR52K3P Gene:

Hs.162035
genes like me logo Genes that share expression patterns with OR52K3P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR52K3P Gene

Orthologs for OR52K3P Gene

Evolution for OR52K3P Gene

ENSEMBL:
Gene Tree for OR52K3P (if available)
TreeFam:
Gene Tree for OR52K3P (if available)

No data available for Orthologs for OR52K3P Gene

Paralogs for OR52K3P Gene

(222) SIMAP similar genes for OR52K3P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with OR52K3P: view

No data available for Paralogs for OR52K3P Gene

Variants for OR52K3P Gene

Relevant External Links for OR52K3P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR52K3P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR52K3P Gene

Disorders for OR52K3P Gene

Relevant External Links for OR52K3P

Genetic Association Database (GAD)
OR52K3P
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
OR52K3P

No disorders were found for OR52K3P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR52K3P Gene

Publications for OR52K3P Gene

  1. A high-density genome-wide association screen of sporadic ALS in US veterans. (PMID: 22470424) Kwee L.C. … Hauser M.A. (PLoS ONE 2012) 3 46 64

Products for OR52K3P Gene

Sources for OR52K3P Gene

Content
Loading form....