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Aliases for OR52H2P Gene

Subcategory (RNA class) for OR52H2P Gene

lncRNA

Aliases for OR52H2P Gene

  • Olfactory Receptor Family 52 Subfamily H Member 2 Pseudogene 2 3 5
  • Olfactory Receptor, Family 52, Subfamily H, Member 2 Pseudogene 2

External Ids for OR52H2P Gene

ORGUL Members for OR52H2P Gene

Previous GeneCards Identifiers for OR52H2P Gene

  • GC11U990495
  • GC11M005529
  • GC11M005554
  • GC11M005573
  • GC11M005574
  • GC11M005578
  • GC11M005583
  • GC11M005588
  • GC11M005600
  • GC11M005607

Summaries for OR52H2P Gene

Entrez Gene Summary for OR52H2P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR52H2P Gene

OR52H2P (Olfactory Receptor Family 52 Subfamily H Member 2 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR52H2P Gene

Genomics for OR52H2P Gene

Regulatory Elements for OR52H2P Gene

Enhancers for OR52H2P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G005550 0.9 Ensembl ENCODE 0.7 +1.7 1685 1.1 SMARCE1 STAT1 MTA2 BHLHE40 JUN DPF2 FOSL1 ARID1B JUND ATF3 ENSG00000167355 HBE1 HBG2 TRIM6 OR52D1 OR51I2 OLFM5P OR52H2P OR52H1
GH11G005546 0.3 FANTOM5 0.4 +6.4 6351 0.1 OR56A1 OR56A3 OR51Q1 OR52E8 OR52N1 OR56A4 OR52N4 OR52E2 OR52E4 OR52A1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OR52H2P on UCSC Golden Path with GeneCards custom track

Genomic Location for OR52H2P Gene

Chromosome:
11
Start:
5,551,662 bp from pter
End:
5,552,596 bp from pter
Size:
935 bases
Orientation:
Minus strand

Genomic View for OR52H2P Gene

Genes around OR52H2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR52H2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR52H2P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR52H2P Gene

Proteins for OR52H2P Gene

Post-translational modifications for OR52H2P Gene

No Post-translational modifications

Other Protein References for OR52H2P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR52H2P Gene

Domains & Families for OR52H2P Gene

Gene Families for OR52H2P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR52H2P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR52H2P Gene

Function for OR52H2P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR52H2P Gene

Localization for OR52H2P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OR52H2P Gene

Pathways & Interactions for OR52H2P Gene

SuperPathways for OR52H2P Gene

No Data Available

Interacting Proteins for OR52H2P Gene

Gene Ontology (GO) - Biological Process for OR52H2P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR52H2P Gene

Transcripts for OR52H2P Gene

mRNA/cDNA for OR52H2P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR52H2P Gene

No ASD Table

Relevant External Links for OR52H2P Gene

GeneLoc Exon Structure for
OR52H2P
ECgene alternative splicing isoforms for
OR52H2P

Expression for OR52H2P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR52H2P Gene

NURSA nuclear receptor signaling pathways regulating expression of OR52H2P Gene:

OR52H2P
genes like me logo Genes that share expression patterns with OR52H2P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR52H2P Gene

Orthologs for OR52H2P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR52H2P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Or52h2 55 Olfr649
  • chr7:104,189,270-104,190,205
Species where no ortholog for OR52H2P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR52H2P Gene

ENSEMBL:
Gene Tree for OR52H2P (if available)
TreeFam:
Gene Tree for OR52H2P (if available)

Paralogs for OR52H2P Gene

No data available for Paralogs for OR52H2P Gene

Variants for OR52H2P Gene

Relevant External Links for OR52H2P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR52H2P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR52H2P Gene

Disorders for OR52H2P Gene

No disorders were found for OR52H2P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR52H2P Gene

Publications for OR52H2P Gene

No publications were found for OR52H2P Gene.

Products for OR52H2P Gene

Sources for OR52H2P Gene

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