Free for academic non-profit institutions. Other users need a Commercial license

Aliases for OR52A4P Gene

Aliases for OR52A4P Gene

  • Olfactory Receptor, Family 52, Subfamily A, Member 4, Pseudogene 2 3
  • OR52A4 3 4
  • Olfactory Receptor, Family 52, Subfamily A, Member 4 2
  • Putative Olfactory Receptor 52A4 3

External Ids for OR52A4P Gene

Previous Symbols for OR52A4P Gene

  • OR52A4

Summaries for OR52A4P Gene

Entrez Gene Summary for OR52A4P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. Although originally considered to be a functional olfactory receptor, this family member is now considered to be pseudogene due to the presence of a C-terminal frameshift compared to other family members; this is also consistent with the Classifier for Olfactory Receptor Pseudogenes (CORP), as described in PMID:16939646. [provided by RefSeq, Jun 2011]

GeneCards Summary for OR52A4P Gene

OR52A4P (Olfactory Receptor, Family 52, Subfamily A, Member 4, Pseudogene) is a Pseudogene. Among its related pathways are Signaling by GPCR and Signaling by GPCR.

UniProtKB/Swiss-Prot for OR52A4P Gene

  • Odorant receptor.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR52A4P Gene

Genomics for OR52A4P Gene

Genomic Location for OR52A4P Gene

Start:
5,120,621 bp from pter
End:
5,124,513 bp from pter
Size:
3,893 bases
Orientation:
Minus strand

Genomic View for OR52A4P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for OR52A4P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR52A4P Gene

No data available for Regulatory Elements for OR52A4P Gene

Proteins for OR52A4P Gene

  • Protein details for OR52A4P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NMU1-O52A4_HUMAN
    Recommended name:
    Olfactory receptor 52A4
    Protein Accession:
    A6NMU1
    Secondary Accessions:
    • B9EIN7

    Protein attributes for OR52A4P Gene

    Size:
    304 amino acids
    Molecular mass:
    34901 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR52A4P Gene

Proteomics data for OR52A4P Gene at MOPED

Post-translational modifications for OR52A4P Gene

No Post-translational modifications

Other Protein References for OR52A4P Gene

Reactome Protein details:

No data available for DME Specific Peptides for OR52A4P Gene

Domains for OR52A4P Gene

Gene Families for OR52A4P Gene

HGNC:
  • OR52 :GPCR / Class A : Olfactory receptors

Protein Domains for OR52A4P Gene

UniProtKB/Swiss-Prot:

O52A4_HUMAN
Family:
  • Belongs to the G-protein coupled receptor 1 family.:
    • A6NMU1
genes like me logo Genes that share domains with OR52A4P: view

Function for OR52A4P Gene

Molecular function for OR52A4P Gene

UniProtKB/Swiss-Prot Function: Odorant receptor.

Gene Ontology (GO) - Molecular Function for OR52A4P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G-protein coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IEA --
genes like me logo Genes that share ontologies with OR52A4P: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for OR52A4P Gene

Localization for OR52A4P Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR52A4P Gene

Cell membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for OR52A4P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR52A4P: view

Pathways for OR52A4P Gene

genes like me logo Genes that share pathways with OR52A4P: view

Pathways by source for OR52A4P Gene

Interacting Proteins for OR52A4P Gene

Gene Ontology (GO) - Biological Process for OR52A4P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway IEA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR52A4P: view

Transcripts for OR52A4P Gene

mRNA/cDNA for OR52A4P Gene

(1) REFSEQ mRNAs :
(1) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR52A4P Gene

No ASD Table

Relevant External Links for OR52A4P Gene

GeneLoc Exon Structure for
OR52A4P
ECgene alternative splicing isoforms for
OR52A4P

Expression for OR52A4P Gene

mRNA expression in normal human tissues for OR52A4P Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for OR52A4P Gene

genes like me logo Genes that share expressions with OR52A4P: view

Orthologs for OR52A4P Gene

Evolution for OR52A4P Gene

ENSEMBL:
Gene Tree for OR52A4P (if available)
TreeFam:
Gene Tree for OR52A4P (if available)

No data available for Orthologs for OR52A4P Gene

Paralogs for OR52A4P Gene

No data available for Paralogs for OR52A4P Gene

Variants for OR52A4P Gene

Relevant External Links for OR52A4P Gene

HapMap Linkage Disequilibrium report
OR52A4P

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for OR52A4P Gene

Disorders for OR52A4P Gene

No disorders were found for OR52A4P Gene.

No data available for UniProtKB/Swiss-Prot for OR52A4P Gene

Publications for OR52A4P Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. A probabilistic classifier for olfactory receptor pseudogenes. (PMID: 16939646) Menashe I. … Lancet D. (BMC Bioinformatics 2006) 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  4. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 4

Products for OR52A4P Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate OR52A4P
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for OR52A4P
    • Block miRNA regulation of OR52A4P using miScript Target Protectors

    Sources for OR52A4P Gene

    Back to Top

    Content