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Aliases for OR4F1P Gene

Subcategory (RNA class) for OR4F1P Gene

lncRNA

Aliases for OR4F1P Gene

  • Olfactory Receptor Family 4 Subfamily F Member 1 Pseudogene 2 3 5
  • Olfactory Receptor, Family 4, Subfamily F, Member 1 Pseudogene 2
  • HSDJ0609N19 3
  • OR4F1 3

External Ids for OR4F1P Gene

ORGUL Members for OR4F1P Gene

Previous HGNC Symbols for OR4F1P Gene

  • OR4F1

Previous GeneCards Identifiers for OR4F1P Gene

  • GC06U990197

Summaries for OR4F1P Gene

Entrez Gene Summary for OR4F1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR4F1P Gene

OR4F1P (Olfactory Receptor Family 4 Subfamily F Member 1 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for OR4F1P Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR4F1P Gene

Genomics for OR4F1P Gene

Genomic Location for OR4F1P Gene

Chromosome:
6
Start:
105,919 bp from pter
End:
106,856 bp from pter
Size:
938 bases
Orientation:
Minus strand

Genomic View for OR4F1P Gene

Genes around OR4F1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR4F1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR4F1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR4F1P Gene

No data available for Regulatory Elements for OR4F1P Gene

Proteins for OR4F1P Gene

Post-translational modifications for OR4F1P Gene

No Post-translational modifications

Other Protein References for OR4F1P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR4F1P Gene

Domains & Families for OR4F1P Gene

Gene Families for OR4F1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR4F1P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR4F1P Gene

Function for OR4F1P Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for OR4F1P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR4F1P Gene

Localization for OR4F1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OR4F1P Gene

Pathways & Interactions for OR4F1P Gene

SuperPathways for OR4F1P Gene

No Data Available

Interacting Proteins for OR4F1P Gene

Gene Ontology (GO) - Biological Process for OR4F1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR4F1P Gene

Drugs & Compounds for OR4F1P Gene

No Compound Related Data Available

Transcripts for OR4F1P Gene

mRNA/cDNA for OR4F1P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for OR4F1P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for OR4F1P Gene

No ASD Table

Relevant External Links for OR4F1P Gene

GeneLoc Exon Structure for
OR4F1P
ECgene alternative splicing isoforms for
OR4F1P

Expression for OR4F1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR4F1P Gene

NURSA nuclear receptor signaling pathways regulating expression of OR4F1P Gene:

OR4F1P
genes like me logo Genes that share expression patterns with OR4F1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR4F1P Gene

Orthologs for OR4F1P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR4F1P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Or4f1-ps 52 Olfr268-ps1
  • chr2:111,844,292-111,844,888
Species where no ortholog for OR4F1P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR4F1P Gene

ENSEMBL:
Gene Tree for OR4F1P (if available)
TreeFam:
Gene Tree for OR4F1P (if available)

Paralogs for OR4F1P Gene

No data available for Paralogs for OR4F1P Gene

Variants for OR4F1P Gene

Relevant External Links for OR4F1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR4F1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR4F1P Gene

Disorders for OR4F1P Gene

No disorders were found for OR4F1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for OR4F1P Gene

Publications for OR4F1P Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 60

Products for OR4F1P Gene

Sources for OR4F1P Gene

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