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Aliases for OR4F15 Gene

Aliases for OR4F15 Gene

  • Olfactory Receptor, Family 4, Subfamily F, Member 15 2 3
  • Olfactory Receptor OR15-14 4

External Ids for OR4F15 Gene

Summaries for OR4F15 Gene

Entrez Gene Summary for OR4F15 Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR4F15 Gene

OR4F15 (Olfactory Receptor, Family 4, Subfamily F, Member 15) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Signaling by GPCR. GO annotations related to this gene include G-protein coupled receptor activity and olfactory receptor activity. An important paralog of this gene is OR4F4.

UniProtKB/Swiss-Prot for OR4F15 Gene

  • Odorant receptor.

Gene Wiki entry for OR4F15 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR4F15 Gene

Genomics for OR4F15 Gene

Genomic Location for OR4F15 Gene

Start:
101,805,720 bp from pter
End:
101,819,147 bp from pter
Size:
13,428 bases
Orientation:
Plus strand

Genomic View for OR4F15 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for OR4F15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR4F15 Gene

Regulatory Elements for OR4F15 Gene

Proteins for OR4F15 Gene

  • Protein details for OR4F15 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NGB8-O4F15_HUMAN
    Recommended name:
    Olfactory receptor 4F15
    Protein Accession:
    Q8NGB8
    Secondary Accessions:
    • B2RNQ5
    • Q6IF57
    • Q96R70

    Protein attributes for OR4F15 Gene

    Size:
    312 amino acids
    Molecular mass:
    35369 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR4F15 Gene

Proteomics data for OR4F15 Gene at MOPED

Post-translational modifications for OR4F15 Gene

Other Protein References for OR4F15 Gene

ENSEMBL proteins:
Reactome Protein details:
REFSEQ proteins:

No data available for DME Specific Peptides for OR4F15 Gene

Domains for OR4F15 Gene

Gene Families for OR4F15 Gene

HGNC:
  • OR4 :GPCR / Class A : Olfactory receptors

Protein Domains for OR4F15 Gene

Suggested Antigen Peptide Sequences for OR4F15 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8NGB8

UniProtKB/Swiss-Prot:

O4F15_HUMAN
Family:
  • Belongs to the G-protein coupled receptor 1 family.:
    • Q8NGB8
genes like me logo Genes that share domains with OR4F15: view

Function for OR4F15 Gene

Molecular function for OR4F15 Gene

UniProtKB/Swiss-Prot Function: Odorant receptor.

Gene Ontology (GO) - Molecular Function for OR4F15 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004888 transmembrane signaling receptor activity IBA --
GO:0004930 G-protein coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IEA --
genes like me logo Genes that share ontologies with OR4F15: view

Phenotypes for OR4F15 Gene

GenomeRNAi human phenotypes for OR4F15:
genes like me logo Genes that share phenotypes with OR4F15: view

No data available for Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for OR4F15 Gene

Localization for OR4F15 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR4F15 Gene

Cell membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for OR4F15 Gene COMPARTMENTS Subcellular localization image for OR4F15 gene
Compartment Confidence
plasma membrane 5

Gene Ontology (GO) - Cellular Components for OR4F15 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0016021 integral component of membrane IBA --
genes like me logo Genes that share ontologies with OR4F15: view

Pathways for OR4F15 Gene

genes like me logo Genes that share pathways with OR4F15: view

Pathways by source for OR4F15 Gene

Interacting Proteins for OR4F15 Gene

Gene Ontology (GO) - Biological Process for OR4F15 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway IBA --
GO:0050907 detection of chemical stimulus involved in sensory perception IBA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR4F15: view

Transcripts for OR4F15 Gene

mRNA/cDNA for OR4F15 Gene

(1) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR4F15 Gene

No ASD Table

Relevant External Links for OR4F15 Gene

GeneLoc Exon Structure for
OR4F15
ECgene alternative splicing isoforms for
OR4F15

Expression for OR4F15 Gene

mRNA expression in normal human tissues for OR4F15 Gene

SOURCE GeneReport for Unigene cluster for OR4F15 Gene Hs.554589

genes like me logo Genes that share expressions with OR4F15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for OR4F15 Gene

Orthologs for OR4F15 Gene

This gene was present in the common ancestor of mammals.

Orthologs for OR4F15 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC467783 35
  • 99.47 (n)
  • 99.04 (a)
OR4F15 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia OR4F15 35
  • 88.42 (n)
  • 84.24 (a)
OR4F15 36
  • 82 (a)
OneToOne
dog
(Canis familiaris)
Mammalia -- 36
  • 66 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Olfr1309 35
  • 84.14 (n)
  • 85.85 (a)
Olfr1309 16
Olfr1309 36
  • 83 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 68 (a)
OneToMany
rat
(Rattus norvegicus)
Mammalia Olr782 35
  • 84.14 (n)
  • 84.24 (a)
Species with no ortholog for OR4F15:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR4F15 Gene

ENSEMBL:
Gene Tree for OR4F15 (if available)
TreeFam:
Gene Tree for OR4F15 (if available)

Paralogs for OR4F15 Gene

Selected SIMAP similar genes for OR4F15 Gene using alignment to 1 proteins:

Pseudogenes.org Pseudogenes for OR4F15 Gene

genes like me logo Genes that share paralogs with OR4F15: view

Variants for OR4F15 Gene

Sequence variations from dbSNP and Humsavar for OR4F15 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs2063695 -- 101,819,389(+) TGTAA(C/T)TGAAC downstream-variant-500B
rs7180273 -- 101,819,617(+) TCGAG(C/T)AATTC downstream-variant-500B
rs9328589 -- 101,816,294(+) CAGAA(C/T)GTCAT upstream-variant-2KB
rs12324219 -- 101,819,104(+) CTTGC(A/G)CATTT synonymous-codon, reference
rs28376755 -- 101,819,582(+) GCTCA(C/G)TGCAA downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for OR4F15 Gene

Variant ID Type Subtype PubMed ID
dgv113e55 CNV Gain 17911159
dgv2454n71 CNV Gain 21882294
nsv904619 CNV Gain 21882294
dgv788e1 CNV Complex 17122850
nsv469708 CNV Gain 16826518
esv2751291 CNV Gain 17911159
nsv904620 CNV Loss 21882294
nsv469527 CNV Complex 16826518
nsv524612 CNV Loss 19592680
nsv519940 CNV Gain 19592680
nsv904621 CNV Gain 21882294
nsv9314 CNV Gain+Loss 18304495

Relevant External Links for OR4F15 Gene

HapMap Linkage Disequilibrium report
OR4F15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for OR4F15 Gene

Disorders for OR4F15 Gene

No disorders were found for OR4F15 Gene.

No data available for UniProtKB/Swiss-Prot for OR4F15 Gene

Publications for OR4F15 Gene

  1. DEFOG: a practical scheme for deciphering families of genes. (PMID: 12213199) Fuchs T. … Shamir R. (Genomics 2002) 3 4
  2. The human olfactory receptor gene family. (PMID: 14983052) Malnic B. … Buck L.B. (Proc. Natl. Acad. Sci. U.S.A. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  5. Natural selection on the olfactory receptor gene family in humans and chimpanzees. (PMID: 12908129) Gilad Y. … Paabo S. (Am. J. Hum. Genet. 2003) 3

Products for OR4F15 Gene

Sources for OR4F15 Gene

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