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Aliases for OR4F13P Gene

Aliases for OR4F13P Gene

  • Olfactory Receptor Family 4 Subfamily F Member 13 Pseudogene 2 3 5
  • Olfactory Receptor, Family 4, Subfamily F, Member 13 Pseudogene 2
  • Putative Olfactory Receptor GPCRLTM7 3
  • GPCRLTM7 3

External Ids for OR4F13P Gene

Previous GeneCards Identifiers for OR4F13P Gene

  • GC06U990269
  • GC15P100118
  • GC15P100206
  • GC15P102383
  • GC15P102385
  • GC15P102570
  • GC15P103065
  • GC15P103262
  • GC15P103705
  • GC15P101843
  • GC15P102026
  • GC15P102205
  • GC15P102812
  • GC15P103003

Summaries for OR4F13P Gene

Entrez Gene Summary for OR4F13P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR4F13P Gene

OR4F13P (Olfactory Receptor Family 4 Subfamily F Member 13 Pseudogene) is a Pseudogene.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR4F13P Gene

Genomics for OR4F13P Gene

Genomic Location for OR4F13P Gene

Chromosome:
15
Start:
101,842,119 bp from pter
End:
101,850,324 bp from pter
Size:
8,206 bases
Orientation:
Plus strand

Genomic View for OR4F13P Gene

Genes around OR4F13P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR4F13P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR4F13P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR4F13P Gene

No data available for Regulatory Elements for OR4F13P Gene

Proteins for OR4F13P Gene

Post-translational modifications for OR4F13P Gene

No Post-translational modifications

Other Protein References for OR4F13P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR4F13P Gene

Domains & Families for OR4F13P Gene

Gene Families for OR4F13P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR4F13P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR4F13P Gene

Function for OR4F13P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR4F13P Gene

Localization for OR4F13P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OR4F13P Gene

Pathways & Interactions for OR4F13P Gene

SuperPathways for OR4F13P Gene

No Data Available

Interacting Proteins for OR4F13P Gene

Gene Ontology (GO) - Biological Process for OR4F13P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR4F13P Gene

Drugs & Compounds for OR4F13P Gene

No Compound Related Data Available

Transcripts for OR4F13P Gene

mRNA/cDNA for OR4F13P Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR4F13P Gene

No ASD Table

Relevant External Links for OR4F13P Gene

GeneLoc Exon Structure for
OR4F13P
ECgene alternative splicing isoforms for
OR4F13P

Expression for OR4F13P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR4F13P Gene

NURSA nuclear receptor signaling pathways regulating expression of OR4F13P Gene:

OR4F13P

SOURCE GeneReport for Unigene cluster for OR4F13P Gene:

Hs.578689
genes like me logo Genes that share expression patterns with OR4F13P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR4F13P Gene

Orthologs for OR4F13P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR4F13P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Or4f56 55 Olfr1305
  • chr2:111,872,918-111,873,853
Species where no ortholog for OR4F13P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR4F13P Gene

ENSEMBL:
Gene Tree for OR4F13P (if available)
TreeFam:
Gene Tree for OR4F13P (if available)

Paralogs for OR4F13P Gene

No data available for Paralogs for OR4F13P Gene

Variants for OR4F13P Gene

Sequence variations from dbSNP and Humsavar for OR4F13P Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1000020804 -- 101,845,494(+) TGAGA(A/G)CCACT intron-variant
rs1000381453 -- 101,843,392(+) TTCTT(A/C)ACCTG intron-variant
rs1000414186 -- 101,843,141(+) TCAAG(G/T)AGGTT intron-variant
rs1000886552 -- 101,847,989(+) TATTT(A/G)CAACA intron-variant
rs1001235264 -- 101,848,253(+) AAAGT(C/G/T)TATGT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for OR4F13P Gene

Variant ID Type Subtype PubMed ID
dgv113e55 CNV gain 17911159
dgv2677n100 CNV loss 25217958
dgv2685n100 CNV gain 25217958
dgv2686n100 CNV gain 25217958
dgv2687n100 CNV gain+loss 25217958
dgv4801n54 CNV gain 21841781
dgv4802n54 CNV gain 21841781
dgv768e212 CNV gain 25503493
esv2751291 CNV gain 17911159
esv27561 CNV gain 19812545
esv2760064 CNV gain 17122850
esv2760373 CNV gain 21179565
esv2761688 CNV gain+loss 21179565
esv3581886 CNV loss 25503493
esv3637524 CNV loss 21293372
esv3637525 CNV gain 21293372
esv3892751 CNV loss 25118596
nsv1036552 CNV gain 25217958
nsv1037250 CNV loss 25217958
nsv1039593 CNV loss 25217958
nsv1040586 CNV gain 25217958
nsv1041586 CNV gain 25217958
nsv1043581 CNV gain 25217958
nsv1045405 CNV loss 25217958
nsv1049739 CNV loss 25217958
nsv1054517 CNV loss 25217958
nsv469527 CNV loss 16826518
nsv469708 CNV gain 16826518
nsv517410 CNV loss 19592680
nsv570917 CNV loss 21841781
nsv570918 CNV gain 21841781
nsv570919 CNV loss 21841781
nsv9314 CNV gain+loss 18304495

Relevant External Links for OR4F13P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR4F13P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for OR4F13P Gene

Disorders for OR4F13P Gene

Relevant External Links for OR4F13P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
OR4F13P

No disorders were found for OR4F13P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR4F13P Gene

Publications for OR4F13P Gene

No publications were found for OR4F13P Gene.

Products for OR4F13P Gene

Sources for OR4F13P Gene

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