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Aliases for OR4E2 Gene

Aliases for OR4E2 Gene

  • Olfactory Receptor, Family 4, Subfamily E, Member 2 2 3
  • Olfactory Receptor OR14-42 3 4
  • Olfactory Receptor 4E2 3
  • OR14-42 3

External Ids for OR4E2 Gene

Summaries for OR4E2 Gene

Entrez Gene Summary for OR4E2 Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR4E2 Gene

OR4E2 (Olfactory Receptor, Family 4, Subfamily E, Member 2) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Signaling by GPCR. GO annotations related to this gene include G-protein coupled receptor activity and olfactory receptor activity. An important paralog of this gene is OR4D9.

UniProtKB/Swiss-Prot for OR4E2 Gene

  • Odorant receptor.

Gene Wiki entry for OR4E2 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR4E2 Gene

Genomics for OR4E2 Gene

Genomic Location for OR4E2 Gene

Start:
21,665,083 bp from pter
End:
21,666,024 bp from pter
Size:
942 bases
Orientation:
Plus strand

Genomic View for OR4E2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for OR4E2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR4E2 Gene

Regulatory Elements for OR4E2 Gene

Proteins for OR4E2 Gene

  • Protein details for OR4E2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NGC2-OR4E2_HUMAN
    Recommended name:
    Olfactory receptor 4E2
    Protein Accession:
    Q8NGC2
    Secondary Accessions:
    • Q6IET6
    • Q96R62

    Protein attributes for OR4E2 Gene

    Size:
    313 amino acids
    Molecular mass:
    35466 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR4E2 Gene

Proteomics data for OR4E2 Gene at MOPED

Post-translational modifications for OR4E2 Gene

Other Protein References for OR4E2 Gene

ENSEMBL proteins:
Reactome Protein details:
REFSEQ proteins:

No data available for DME Specific Peptides for OR4E2 Gene

Domains for OR4E2 Gene

Gene Families for OR4E2 Gene

HGNC:
  • OR4 :GPCR / Class A : Olfactory receptors

Protein Domains for OR4E2 Gene

UniProtKB/Swiss-Prot:

OR4E2_HUMAN
Family:
  • Belongs to the G-protein coupled receptor 1 family.:
    • Q8NGC2
genes like me logo Genes that share domains with OR4E2: view

Function for OR4E2 Gene

Molecular function for OR4E2 Gene

UniProtKB/Swiss-Prot Function: Odorant receptor.

Gene Ontology (GO) - Molecular Function for OR4E2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004888 transmembrane signaling receptor activity IBA --
GO:0004930 G-protein coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IEA --
genes like me logo Genes that share ontologies with OR4E2: view

Phenotypes for OR4E2 Gene

GenomeRNAi human phenotypes for OR4E2:
genes like me logo Genes that share phenotypes with OR4E2: view

No data available for Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for OR4E2 Gene

Localization for OR4E2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR4E2 Gene

Cell membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for OR4E2 Gene COMPARTMENTS Subcellular localization image for OR4E2 gene
Compartment Confidence
plasma membrane 5

Gene Ontology (GO) - Cellular Components for OR4E2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0016021 integral component of membrane IBA --
genes like me logo Genes that share ontologies with OR4E2: view

Pathways for OR4E2 Gene

genes like me logo Genes that share pathways with OR4E2: view

Pathways by source for OR4E2 Gene

Interacting Proteins for OR4E2 Gene

Gene Ontology (GO) - Biological Process for OR4E2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway IBA --
GO:0050907 detection of chemical stimulus involved in sensory perception IBA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR4E2: view

Transcripts for OR4E2 Gene

mRNA/cDNA for OR4E2 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR4E2 Gene

No ASD Table

Relevant External Links for OR4E2 Gene

GeneLoc Exon Structure for
OR4E2
ECgene alternative splicing isoforms for
OR4E2

Expression for OR4E2 Gene

mRNA expression in normal human tissues for OR4E2 Gene

SOURCE GeneReport for Unigene cluster for OR4E2 Gene Hs.547982

genes like me logo Genes that share expressions with OR4E2: view

Orthologs for OR4E2 Gene

This gene was present in the common ancestor of chordates.

Orthologs for OR4E2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC467386 36
  • 99.04 (n)
  • 98.08 (a)
OR4E2 37
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia OR4E2 36
  • 89.03 (n)
  • 86.26 (a)
OR4E2 37
  • 86 (a)
OneToOne
dog
(Canis familiaris)
Mammalia OR4E2 37
  • 83 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Olfr1509 36
  • 86.17 (n)
  • 85.95 (a)
Olfr1509 16
Olfr1509 37
  • 85 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia OR4E2 37
  • 78 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia OR4E2 37
  • 67 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Olr1643 36
  • 86.27 (n)
  • 86.27 (a)
lizard
(Anolis carolinensis)
Reptilia OR4E2 37
  • 59 (a)
OneToOne
Species with no ortholog for OR4E2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR4E2 Gene

ENSEMBL:
Gene Tree for OR4E2 (if available)
TreeFam:
Gene Tree for OR4E2 (if available)

Paralogs for OR4E2 Gene

Selected SIMAP similar genes for OR4E2 Gene using alignment to 1 proteins:

Pseudogenes.org Pseudogenes for OR4E2 Gene

genes like me logo Genes that share paralogs with OR4E2: view

Variants for OR4E2 Gene

Sequence variations from dbSNP and Humsavar for OR4E2 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
rs970382 - 21,665,783(+) GCGCC(A/G)GAAAG missense, reference
rs2874103 - 21,665,434(+) TCATT(A/G)TGGCG reference, missense
rs10138803 -- 21,664,654(+) GTGCA(G/T)CAGAC upstream-variant-2KB
rs10146244 -- 21,664,108(+) tttgg(G/T)tatat upstream-variant-2KB
rs10146733 -- 21,664,593(+) TGGTC(A/G)GAGAG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for OR4E2 Gene

Variant ID Type Subtype PubMed ID
esv2422459 CNV Duplication 17116639
nsv456147 CNV Gain 19166990
nsv901479 CNV Gain 21882294

Relevant External Links for OR4E2 Gene

HapMap Linkage Disequilibrium report
OR4E2

Disorders for OR4E2 Gene

No disorders were found for OR4E2 Gene.

No data available for UniProtKB/Swiss-Prot for OR4E2 Gene

Publications for OR4E2 Gene

  1. DEFOG: a practical scheme for deciphering families of genes. (PMID: 12213199) Fuchs T. … Shamir R. (Genomics 2002) 3 4
  2. The human olfactory receptor gene family. (PMID: 14983052) Malnic B. … Buck L.B. (Proc. Natl. Acad. Sci. U.S.A. 2004) 3 4
  3. The human T-cell receptor TCRAC/TCRDC (C alpha/C delta) region: organization, sequence, and evolution of 97.6 kb of DNA. (PMID: 8188290) Koop B.F. … Hood L. (Genomics 1994) 3
  4. Analysis of the 1.1-Mb human alpha/delta T-cell receptor locus with bacterial artificial chromosome clones. (PMID: 9110172) Boysen C. … Hood L. (Genome Res. 1997) 3

Products for OR4E2 Gene

Sources for OR4E2 Gene

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