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Aliases for OR3A4P Gene

Aliases for OR3A4P Gene

  • Olfactory Receptor Family 3 Subfamily A Member 4 Pseudogene 2 3 5
  • Olfactory Receptor, Family 3, Subfamily A, Member 4 2 3
  • OR17-24 3 4
  • OR3A5P 3 4
  • OR3A4 3 4
  • Olfactory Receptor, Family 3, Subfamily A, Member 4 Pseudogene 2
  • Olfactory Receptor, Family 3, Subfamily A, Member 5 Pseudogene 3
  • Olfactory Receptor OR17-13 Pseudogene 3
  • Olfactory Receptor OR17-16 Pseudogene 3
  • Olfactory Receptor 17-24 4
  • Olfactory Receptor 3A5 4
  • OR17-16 3
  • OLFRA05 3
  • OLFRA06 3
  • OR17-13 3
  • OR17-25 3
  • OR24 3
  • OR25 3

External Ids for OR3A4P Gene

Previous HGNC Symbols for OR3A4P Gene

  • OR3A4

Previous GeneCards Identifiers for OR3A4P Gene

  • GC17P003214
  • GC17P003216
  • GC17P003222
  • GC17P003228
  • GC17P003233

Summaries for OR3A4P Gene

Entrez Gene Summary for OR3A4P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. This olfactory receptor gene is transcribed and contains an intact ORF, but it is predicted to be a pseudogene due to a poorly conserved 7-transmembrane domain structure. [provided by RefSeq, Sep 2008]

GeneCards Summary for OR3A4P Gene

OR3A4P (Olfactory Receptor Family 3 Subfamily A Member 4 Pseudogene) is a Pseudogene. Among its related pathways are Peptide ligand-binding receptors.

UniProtKB/Swiss-Prot for OR3A4P Gene

  • Odorant receptor.

Gene Wiki entry for OR3A4P Gene

Additional gene information for OR3A4P Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR3A4P Gene

Genomics for OR3A4P Gene

Regulatory Elements for OR3A4P Gene

Enhancers for OR3A4P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17H002390 1.9 FANTOM5 ENCODE dbSUPER 14.6 -911.0 -910975 18.6 MLX FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC SSRP1 ZNF610 ZNF585B METTL16 PRPF8 SMYD4 HNRNPA1P16 SMG6 MNT TSR1 ENSG00000263345 SGSM2 RPA1
GH17H002847 1.7 FANTOM5 Ensembl ENCODE dbSUPER 14.6 -461.2 -461165 1.9 ELF3 INSM2 KLF17 SIN3A ZNF2 RAD21 ZEB1 GLIS2 ZNF366 ZNF143 OR1D5 SAMD11P1 OR1D2 EIF4A1P9 OR1E3 OR1D3P OR3A4P OR1E2 ENSG00000262869 PAFAH1B1
GH17H003885 1.7 FANTOM5 ENCODE dbSUPER 14.6 +580.6 580551 10.9 HDGF PKNOX1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B ZNF302 ZNF416 ANKFY1 MYBBP1A PELP1 ENSG00000235085 LOC105371492 ZZEF1 P2RX1 OR1E2 OR3A4P OR1E3
GH17H004159 1.6 FANTOM5 Ensembl ENCODE 14.6 +852.1 852126 5.5 PKNOX1 SIN3A FEZF1 ZNF2 ZNF121 GATA2 FOS DEK TSHZ1 ZNF592 ZNF232 CYB5D2 OR1D3P OR1E2 OR3A4P ANKFY1 ENSG00000235085 MYBBP1A LOC101927979 INCA1
GH17H003001 1.5 Ensembl ENCODE dbSUPER 14.6 -306.1 -306138 4.3 FOXA2 SIN3A BRCA1 ZNF2 YY1 GLIS2 ATF7 RUNX3 REST ZNF610 OR1D5 OR1D2 OR1E3 OR1D3P OR3A4P SAMD11P1 EIF4A1P9 OR1E2 ENSG00000262869 RAP1GAP2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OR3A4P on UCSC Golden Path with GeneCards custom track

Genomic Locations for OR3A4P Gene

Genomic Locations for OR3A4P Gene
1,949 bases
Plus strand

Genomic View for OR3A4P Gene

Genes around OR3A4P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR3A4P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR3A4P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR3A4P Gene

Proteins for OR3A4P Gene

  • Protein details for OR3A4P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative olfactory receptor 3A4
    Protein Accession:
    Secondary Accessions:
    • Q96R24

    Protein attributes for OR3A4P Gene

    348 amino acids
    Molecular mass:
    37194 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR3A4P Gene

Post-translational modifications for OR3A4P Gene

No Post-translational modifications

No data available for DME Specific Peptides for OR3A4P Gene

Domains & Families for OR3A4P Gene

Gene Families for OR3A4P Gene

Protein Domains for OR3A4P Gene

Suggested Antigen Peptide Sequences for OR3A4P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the G-protein coupled receptor 1 family.
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR3A4P: view

Function for OR3A4P Gene

Molecular function for OR3A4P Gene

GENATLAS Biochemistry:
olfactory receptor gene family 3,subfamily A,member 4,pseudogene,G protein coupled receptor superfamily
UniProtKB/Swiss-Prot Function:
Odorant receptor.

Phenotypes From GWAS Catalog for OR3A4P Gene

Phenotypes for OR3A4P Gene

genes like me logo Genes that share phenotypes with OR3A4P: view

Clone Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR3A4P Gene

Localization for OR3A4P Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR3A4P Gene

Cell membrane; Multi-pass membrane protein.

No data available for Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OR3A4P Gene

Pathways & Interactions for OR3A4P Gene

genes like me logo Genes that share pathways with OR3A4P: view

Pathways by source for OR3A4P Gene

1 BioSystems pathway for OR3A4P Gene

Interacting Proteins for OR3A4P Gene

Gene Ontology (GO) - Biological Process for OR3A4P Gene


No data available for SIGNOR curated interactions for OR3A4P Gene

Drugs & Compounds for OR3A4P Gene

No Compound Related Data Available

Transcripts for OR3A4P Gene

mRNA/cDNA for OR3A4P Gene

(1) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for OR3A4P Gene

No ASD Table

Relevant External Links for OR3A4P Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for OR3A4P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR3A4P Gene

mRNA differential expression in normal tissues according to GTEx for OR3A4P Gene

This gene is overexpressed in Testis (x31.9), Brain - Caudate (basal ganglia) (x7.7), Cervix - Ectocervix (x6.8), and Cervix - Endocervix (x6.6).

NURSA nuclear receptor signaling pathways regulating expression of OR3A4P Gene:


SOURCE GeneReport for Unigene cluster for OR3A4P Gene:

genes like me logo Genes that share expression patterns with OR3A4P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR3A4P Gene

Orthologs for OR3A4P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR3A4P Gene

Organism Taxonomy Gene Similarity Type Details
(Mus musculus)
Mammalia Or3a4 52 Olfr399
  • chr11:74,053,825-74,054,757
Species where no ortholog for OR3A4P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR3A4P Gene

Gene Tree for OR3A4P (if available)
Gene Tree for OR3A4P (if available)

Paralogs for OR3A4P Gene

(434) SIMAP similar genes for OR3A4P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with OR3A4P: view

No data available for Paralogs for OR3A4P Gene

Variants for OR3A4P Gene

Sequence variations from dbSNP and Humsavar for OR3A4P Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1002135297 -- 3,311,507(+) TGGCC(C/T)TAATG intron-variant, downstream-variant-500B
rs1003141282 -- 3,310,505(+) TTCTT(C/T)CTGGG intron-variant, nc-transcript-variant
rs1004177834 -- 3,309,024(+) CCCCA(A/G)CCTCC intron-variant, upstream-variant-2KB
rs1004814995 -- 3,308,825(+) CTCCA(C/T)CCCTT intron-variant, upstream-variant-2KB
rs1007754324 -- 3,310,184(+) TCTTC(C/T)ATCCC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for OR3A4P Gene

Variant ID Type Subtype PubMed ID
nsv574235 CNV loss 21841781
nsv574234 CNV gain 21841781
nsv574233 CNV gain 21841781
nsv574232 CNV gain 21841781
nsv520474 CNV loss 19592680
nsv470570 CNV gain 18288195
nsv457639 CNV gain 19166990
nsv457638 CNV gain 19166990
nsv1065489 CNV gain 25217958
nsv1060926 CNV gain 25217958
esv3892950 CNV loss 25118596
esv3892949 CNV loss 25118596
esv3639742 CNV loss 21293372
esv2674191 CNV deletion 23128226
esv2660206 CNV deletion 23128226

Relevant External Links for OR3A4P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for OR3A4P Gene

Disorders for OR3A4P Gene

Relevant External Links for OR3A4P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for OR3A4P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR3A4P Gene

Publications for OR3A4P Gene

  1. DEFOG: a practical scheme for deciphering families of genes. (PMID: 12213199) Fuchs T … Shamir R (Genomics 2002) 3 4 60
  2. Sequence analysis in the olfactory receptor gene cluster on human chromosome 17: recombinatorial events affecting receptor diversity. (PMID: 8921386) Glusman G … Lancet D (Genomics 1996) 3 22 60
  3. Olfactory receptor gene cluster on human chromosome 17: possible duplication of an ancestral receptor repertoire. (PMID: 8004088) Ben-Arie N … Lehrach H (Human molecular genetics 1994) 3 4 60
  4. A probabilistic classifier for olfactory receptor pseudogenes. (PMID: 16939646) Menashe I … Lancet D (BMC bioinformatics 2006) 3 60
  5. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody MC … Nusbaum C (Nature 2006) 4 60

Products for OR3A4P Gene

Sources for OR3A4P Gene

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