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OR3A4P Gene(Pseudogene)

Olfactory Receptor Family 3 Subfamily A Member 4 Pseudogene

GCID:
GC17P003310
GIFtS:
22
Genes Participants
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Aliases for OR3A4P Gene

Aliases for OR3A4P Gene

  • Olfactory Receptor Family 3 Subfamily A Member 4 Pseudogene 2 3 5
  • Olfactory Receptor, Family 3, Subfamily A, Member 4 Pseudogene 2 3
  • OR17-24 3 4
  • OR3A5P 3 4
  • OR3A4 3 4
  • Olfactory Receptor, Family 3, Subfamily A, Member 5 Pseudogene 3
  • Olfactory Receptor, Family 3, Subfamily A, Member 4 2
  • Olfactory Receptor OR17-13 Pseudogene 3
  • Olfactory Receptor OR17-16 Pseudogene 3
  • Olfactory Receptor 17-24 4
  • Olfactory Receptor 3A5 4
  • OR17-16 3
  • OLFRA05 3
  • OLFRA06 3
  • OR17-13 3
  • OR17-25 3
  • OR24 3
  • OR25 3

External Ids for OR3A4P Gene

Previous HGNC Symbols for OR3A4P Gene

  • OR3A4

Previous GeneCards Identifiers for OR3A4P Gene

  • GC17P003214
  • GC17P003216
  • GC17P003222
  • GC17P003228
  • GC17P003233

Summaries for OR3A4P Gene

Entrez Gene Summary for OR3A4P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. This olfactory receptor gene is transcribed and contains an intact ORF, but it is predicted to be a pseudogene due to a poorly conserved 7-transmembrane domain structure. [provided by RefSeq, Sep 2008]

GeneCards Summary for OR3A4P Gene

OR3A4P (Olfactory Receptor Family 3 Subfamily A Member 4 Pseudogene) is a Pseudogene. Among its related pathways are Peptide ligand-binding receptors and GPCRs, Other.

UniProtKB/Swiss-Prot for OR3A4P Gene

  • Odorant receptor.

Gene Wiki entry for OR3A4P Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR3A4P Gene

Genomics for OR3A4P Gene

Products:

  1. Regulatory Element

Genomic Location for OR3A4P Gene

Chromosome:
17
Start:
3,310,245 bp from pter
End:
3,311,446 bp from pter
Size:
1,202 bases
Orientation:
Plus strand

Genomic View for OR3A4P Gene

Genes around OR3A4P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR3A4P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR3A4P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for OR3A4P Gene

No data available for Regulatory Elements for OR3A4P Gene

Proteins for OR3A4P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for OR3A4P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P47883-OR3A4_HUMAN
    Recommended name:
    Putative olfactory receptor 3A4
    Protein Accession:
    P47883
    Secondary Accessions:
    • Q96R24

    Protein attributes for OR3A4P Gene

    Size:
    348 amino acids
    Molecular mass:
    37194 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR3A4P Gene

Proteomics data for OR3A4P Gene at MOPED

Post-translational modifications for OR3A4P Gene

No Post-translational modifications

No data available for DME Specific Peptides for OR3A4P Gene

Domains & Families for OR3A4P Gene

Gene Families for OR3A4P Gene

HGNC:

Protein Domains for OR3A4P Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for OR3A4P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P47883

UniProtKB/Swiss-Prot:

OR3A4_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR3A4P: view

Function for OR3A4P Gene

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  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Molecular function for OR3A4P Gene

GENATLAS Biochemistry:
olfactory receptor gene family 3,subfamily A,member 4,pseudogene,G protein coupled receptor superfamily
UniProtKB/Swiss-Prot Function:
Odorant receptor.

Phenotypes for OR3A4P Gene

GenomeRNAi human phenotypes for OR3A4P:
genes like me logo Genes that share phenotypes with OR3A4P: view

Inhibitory RNA Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR3A4P Gene

Localization for OR3A4P Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR3A4P Gene

Cell membrane; Multi-pass membrane protein.

No data available for Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OR3A4P Gene

Pathways & Interactions for OR3A4P Gene

genes like me logo Genes that share pathways with OR3A4P: view

Pathways by source for OR3A4P Gene

2 BioSystems pathways for OR3A4P Gene

Interacting Proteins for OR3A4P Gene

Gene Ontology (GO) - Biological Process for OR3A4P Gene

None

No data available for SIGNOR curated interactions for OR3A4P Gene

Drugs & Compounds for OR3A4P Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for OR3A4P Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for OR3A4P Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for OR3A4P Gene

No ASD Table

Relevant External Links for OR3A4P Gene

GeneLoc Exon Structure for
OR3A4P
ECgene alternative splicing isoforms for
OR3A4P

Expression for OR3A4P Gene

Products:

  1. Primer

mRNA expression in normal human tissues for OR3A4P Gene

mRNA expression in normal human tissues for OR3A4P Gene
mRNA expression by GTEx for OR3A4P Gene

mRNA differential expression in normal tissues according to GTEx for OR3A4P Gene

This gene is overexpressed in Testis (x31.9), Brain - Caudate (basal ganglia) (x7.7), Cervix - Ectocervix (x6.8), and Cervix - Endocervix (x6.6).

SOURCE GeneReport for Unigene cluster for OR3A4P Gene Hs.632245

genes like me logo Genes that share expression patterns with OR3A4P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for OR3A4P Gene

Orthologs for OR3A4P Gene

Evolution for OR3A4P Gene

ENSEMBL:
Gene Tree for OR3A4P (if available)
TreeFam:
Gene Tree for OR3A4P (if available)

No data available for Orthologs for OR3A4P Gene

Paralogs for OR3A4P Gene

(434) SIMAP similar genes for OR3A4P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with OR3A4P: view

No data available for Paralogs for OR3A4P Gene

Variants for OR3A4P Gene

Sequence variations from dbSNP and Humsavar for OR3A4P Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
VAR_060594 -
VAR_060595 -
VAR_060596 -
VAR_060597 -
VAR_060598 -

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for OR3A4P Gene

Disorders for OR3A4P Gene

Relevant External Links for OR3A4P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
OR3A4P

No disorders were found for OR3A4P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR3A4P Gene

Publications for OR3A4P Gene

  1. DEFOG: a practical scheme for deciphering families of genes. (PMID: 12213199) Fuchs T. … Shamir R. (Genomics 2002) 3 4 67
  2. Sequence analysis in the olfactory receptor gene cluster on human chromosome 17: recombinatorial events affecting receptor diversity. (PMID: 8921386) Glusman G. … Lancet D. (Genomics 1996) 3 23
  3. A probabilistic classifier for olfactory receptor pseudogenes. (PMID: 16939646) Menashe I. … Lancet D. (BMC Bioinformatics 2006) 3
  4. The human olfactory receptor gene family. (PMID: 14983052) Malnic B. … Buck L.B. (Proc. Natl. Acad. Sci. U.S.A. 2004) 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for OR3A4P Gene

Sources for OR3A4P Gene

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