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Aliases for OR2T10 Gene

Aliases for OR2T10 Gene

  • Olfactory Receptor, Family 2, Subfamily T, Member 10 2 3
  • Olfactory Receptor OR1-64 3 4
  • Olfactory Receptor 2T10 3
  • OR1-64 3

External Ids for OR2T10 Gene

Summaries for OR2T10 Gene

Entrez Gene Summary for OR2T10 Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR2T10 Gene

OR2T10 (Olfactory Receptor, Family 2, Subfamily T, Member 10) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Signaling by GPCR. GO annotations related to this gene include G-protein coupled receptor activity and olfactory receptor activity. An important paralog of this gene is OR2T1.

UniProtKB/Swiss-Prot for OR2T10 Gene

  • Odorant receptor.

Gene Wiki entry for OR2T10 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR2T10 Gene

Genomics for OR2T10 Gene

Genomic Location for OR2T10 Gene

Start:
248,592,830 bp from pter
End:
248,593,768 bp from pter
Size:
939 bases
Orientation:
Minus strand

Genomic View for OR2T10 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for OR2T10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR2T10 Gene

Regulatory Elements for OR2T10 Gene

Proteins for OR2T10 Gene

  • Protein details for OR2T10 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NGZ9-O2T10_HUMAN
    Recommended name:
    Olfactory receptor 2T10
    Protein Accession:
    Q8NGZ9
    Secondary Accessions:
    • B2RNK7

    Protein attributes for OR2T10 Gene

    Size:
    312 amino acids
    Molecular mass:
    35403 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR2T10 Gene

Proteomics data for OR2T10 Gene at MOPED

Post-translational modifications for OR2T10 Gene

Other Protein References for OR2T10 Gene

ENSEMBL proteins:
Reactome Protein details:
REFSEQ proteins:

No data available for DME Specific Peptides for OR2T10 Gene

Domains for OR2T10 Gene

Gene Families for OR2T10 Gene

HGNC:
  • OR2 :GPCR / Class A : Olfactory receptors

Protein Domains for OR2T10 Gene

UniProtKB/Swiss-Prot:

O2T10_HUMAN
Family:
  • Belongs to the G-protein coupled receptor 1 family.:
    • Q8NGZ9
genes like me logo Genes that share domains with OR2T10: view

Function for OR2T10 Gene

Molecular function for OR2T10 Gene

UniProtKB/Swiss-Prot Function: Odorant receptor.

Gene Ontology (GO) - Molecular Function for OR2T10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G-protein coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IBA --
genes like me logo Genes that share ontologies with OR2T10: view

Phenotypes for OR2T10 Gene

GenomeRNAi human phenotypes for OR2T10:
genes like me logo Genes that share phenotypes with OR2T10: view

No data available for Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for OR2T10 Gene

Localization for OR2T10 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR2T10 Gene

Cell membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for OR2T10 Gene COMPARTMENTS Subcellular localization image for OR2T10 gene
Compartment Confidence
plasma membrane 5

Gene Ontology (GO) - Cellular Components for OR2T10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0016021 integral component of membrane IBA --
genes like me logo Genes that share ontologies with OR2T10: view

Pathways for OR2T10 Gene

genes like me logo Genes that share pathways with OR2T10: view

Pathways by source for OR2T10 Gene

Interacting Proteins for OR2T10 Gene

Gene Ontology (GO) - Biological Process for OR2T10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway IBA --
GO:0007608 sensory perception of smell IBA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR2T10: view

Transcripts for OR2T10 Gene

mRNA/cDNA for OR2T10 Gene

(1) REFSEQ mRNAs :
(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR2T10 Gene

No ASD Table

Relevant External Links for OR2T10 Gene

GeneLoc Exon Structure for
OR2T10
ECgene alternative splicing isoforms for
OR2T10

Expression for OR2T10 Gene

mRNA expression in normal human tissues for OR2T10 Gene

mRNA differential expression in normal tissues according to GTEx for OR2T10 Gene

This gene is overexpressed in Kidney - Cortex (31.0).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for OR2T10 Gene

SOURCE GeneReport for Unigene cluster for OR2T10 Gene Hs.553585

genes like me logo Genes that share expressions with OR2T10: view

Orthologs for OR2T10 Gene

This gene was present in the common ancestor of mammals.

Orthologs for OR2T10 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 37
  • 69 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia -- 37
  • 69 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia -- 37
  • 68 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia -- 37
  • 66 (a)
OneToMany
Species with no ortholog for OR2T10:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR2T10 Gene

ENSEMBL:
Gene Tree for OR2T10 (if available)
TreeFam:
Gene Tree for OR2T10 (if available)

Paralogs for OR2T10 Gene

Selected SIMAP similar genes for OR2T10 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with OR2T10: view

Variants for OR2T10 Gene

Sequence variations from dbSNP and Humsavar for OR2T10 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs28374074 -- 248,592,776(+) GACAC(C/T)TAAAG downstream-variant-500B
rs28405936 -- 248,593,693(+) GAGGC(A/G)GCCAG reference, missense
rs28664620 -- 248,593,173(+) AGTAC(A/G)TGAAA missense, reference
rs28695549 -- 248,595,610(+) GGACT(G/T)AATGT upstream-variant-2KB
rs28733753 -- 248,593,110(+) TGATA(A/T)AGTAG reference, missense

Structural Variations from Database of Genomic Variants (DGV) for OR2T10 Gene

Variant ID Type Subtype PubMed ID
nsv515858 CNV Gain+Loss 19592680
esv2750832 CNV Gain 17911159
dgv17e55 CNV Loss 17911159
dgv567n71 CNV Gain 21882294
nsv873462 CNV Loss 21882294
dgv20n17 CNV Loss 16327808
dgv206e1 CNV Complex 17122850
nsv428357 CNV Loss 18775914
esv2750835 CNV Gain 17911159
dgv571n71 CNV Gain 21882294
dgv572n71 CNV Gain+Loss 21882294
nsv7193 OTHER Inversion 18451855
dgv207e1 CNV Complex 17122850
dgv575n71 CNV Gain 21882294
nsv873494 CNV Loss 21882294
nsv821623 CNV Loss 15273396
dgv208e1 CNV Complex 17122850
nsv483043 CNV Complex 15286789
nsv469750 CNV Loss 16826518
dgv576n71 CNV Gain 21882294
nsv5365 CNV Loss 18451855
dgv577n71 CNV Loss 21882294
dgv116n67 CNV Loss 20364138
esv29940 CNV Loss 18421352
esv33052 CNV Gain+Loss 17666407
esv27363 CNV Loss 19812545
dgv578n71 CNV Gain 21882294
nsv873503 CNV Gain+Loss 21882294
dgv579n71 CNV Loss 21882294
nsv873510 CNV Gain 21882294
nsv9191 CNV Gain+Loss 18304495
nsv5376 CNV Insertion 18451855
esv2660478 CNV Deletion 23128226
dgv5n14 CNV Loss 18776910
esv2421359 CNV Deletion 20811451
nsv433194 CNV Loss 18776910
nsv471517 CNV Deletion 19718026
dgv580n71 CNV Loss 21882294
nsv442637 CNV CNV 18776908
nsv827864 CNV Loss 20364138
nsv514048 CNV Loss 21397061
esv2669131 CNV Deletion 23128226

Relevant External Links for OR2T10 Gene

HapMap Linkage Disequilibrium report
OR2T10

Disorders for OR2T10 Gene

No disorders were found for OR2T10 Gene.

No data available for UniProtKB/Swiss-Prot for OR2T10 Gene

Publications for OR2T10 Gene

  1. The human olfactory receptor gene family. (PMID: 14983052) Malnic B. … Buck L.B. (Proc. Natl. Acad. Sci. U.S.A. 2004) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for OR2T10 Gene

Sources for OR2T10 Gene

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