OR2C3 Gene
protein-coding GIFtS: 49
GCID: GC01M247693
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olfactory receptor, family 2, subfamily C, member 3(Previous names: olfactory receptor, family 2, subfamily C, member 4 )
(Previous symbols: OR2C4, OR2C5P)
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Aliases
for OR2C3 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| Olfactory Receptor, Family 2, Subfamily C, Member 31 2 | | Olfactory Receptor 2C42 3 | | OR2C41 2 3 | | Olfactory Receptor 2C52 3 | | OR2C5P1 2 3 | | Olfactory Receptor OR1-302 3 | | OST7421 2 | | Olfactory Receptor 2C32 | | Olfactory Receptor, Family 2, Subfamily C, Member 41 2 | | Olfactory Receptor, Family 2, Subfamily C, Member 5 Pseudogene2 |
Export aliases for OR2C3 gene to outside databasesPrevious GC identifers: GC01M245551 GC01M242929 GC01M243790 GC01M244640 GC01M244564 GC01M244019 GC01M245760 |
Summaries
for OR2C3 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
Entrez Gene summary for OR2C3:
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers theperception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors(GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with manyneurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction ofodorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to theolfactory receptor genes and proteins for this organism is independent of other organisms. (provided by RefSeq, Jul2008)
UniProtKB/Swiss-Prot: OR2C3_HUMAN, Q8N628Function: Odorant receptor (Potential)
Gene Wiki entry for OR2C3
|
Genomic Views
for OR2C3 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000001.10 NC_018912.1 NT_167186.1
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the OR2C3 gene promoter:
Tal-1 Brachyury MyoD E47
Other transcription factors
Search SABiosciences Chromatin IP Primers for OR2C3
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat OR2C3 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 1q44 Ensembl cytogenetic band: 1q44 HGNC cytogenetic band: 1q44OR2C3 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 1 GeneLoc Exon Structure GeneLoc location for GC01M247693: view genomic region
(about GC identifiers)
Start:
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247,694,854 bp from pter |
End:
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247,695,813 bp from pter |
Size:
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960 bases |
Orientation:
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minus strand |
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Proteins
for OR2C3 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: OR2C3_HUMAN, Q8N628 (See
protein sequence)Recommended Name: Olfactory receptor 2C3 Size: 320 amino acids; 35376 Da
Subcellular location: Cell membrane; Multi-pass membrane protein
Caution: It is uncertain whether Met-1 or Met-2 is the initiator
Sequence caution: Sequence=AAH30717.1; Type=Erroneous initiation; Sequence=DAA04869.1; Type=Erroneous initiation;
Secondary accessions: Q5JQS4 Q6IEZ1 Q8NGW7Explore the universe of human proteins at neXtProt for OR2C3: NX_Q8N628
HORDE protein sequence for OR2C3
OR2C3 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins: NP_932340.3
ENSEMBL proteins: ENSP00000355443 Reactome Protein details: Q8N628
Human Recombinant Protein Products for OR2C3:
Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005886 | plasma membrane |
TAS | -- | | GO:0016021 | integral to membrane |
IEA | -- |
OR2C3 for ontologies About GeneDecksing
OR2C3 Antibody Products:
Assay Products for OR2C3: |
Protein
Domains /
Families
for OR2C3 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
OR2C3 for domains About GeneDecksing
3 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q8N628ProtoNet protein and cluster: Q8N628 1 Blocks protein family: IPB000725 Olfactory receptor signature
UniProtKB/Swiss-Prot: OR2C3_HUMAN, Q8N628Similarity: Belongs to the G-protein coupled receptor 1 family |
Function
for OR2C3 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase,
shRNA from
OriGene,
Sirion Biotech,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Sirion Biotech,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
Sirion Biotech,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Molecular Function:
UniProtKB/Swiss-Prot Summary: OR2C3_HUMAN, Q8N628Function: Odorant receptor (Potential) Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0004930 | G-protein coupled receptor activity |
IEA | -- | | GO:0004984 | olfactory receptor activity |
IEA | -- |
OR2C3 for ontologies About GeneDecksing
Animal Models:
Clone
Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for OR2C3 (see all 2)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for OR2C3 (see all 2)
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
| |  | GenScript: all cDNA clones in your preferred vector: OR2C3 (NM_198074) | |  | Browse Sino Biological Human cDNA Clones | |  | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for OR2C3 | |  | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat OR2C3 |
In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for OR2C3 |
|
Pathways & Interactions
for OR2C3 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Unified GeneCards pathways About this table
See pathways by source
| Super-pathway | contained gene-specific pathways |
|---|
| 1 | Signaling by GPCR | | | 2 | Olfactory transduction | |
Pathway sources
See GeneCards unified pathways
Show all pathways
4 
Reactome Pathways for OR2C3
1 
Kegg Pathway (Kegg details for OR2C3):
OR2C3 for pathways About GeneDecksing
Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for OR2C3
STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)
5/273 Interacting proteins for OR2C3 (ENSP000003554434) via UniProtKB, MINT, STRING, and/or I2D (see all 273)About this table
|
Drugs & Compounds
for OR2C3 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for OR2C3
Search CenterWatch for drugs/clinical trials and news about OR2C3
|
Transcripts
for OR2C3 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
Sirion Biotech,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for OR2C3 gene: NM_198074.4 Unigene Cluster for OR2C3: Olfactory receptor, family 2, subfamily C, member 3 Hs.730218 Unigene Representative Sequence: BC0307171 Ensembl transcript including schematic representation, and UCSC links where relevant: ENST00000366487(uc009xgy.3)
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for OR2C3 (see all 2)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for OR2C3 (see all 2)
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript: all cDNA clones in your preferred vector: OR2C3 (NM_198074) | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for OR2C3 | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat OR2C3 |
Additional cDNA sequence: BC030717.1 1 DOTS entry: DT.95232699 13 AceView cDNA sequences: AA807063 BX091277 NM_198074 AI554035 BF111921 BC030717 AI808878 BC034303 AI808477 AA634561 BG773223 AA642454 BG763148
GeneLoc Exon Structure
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Expression
for OR2C3 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| OR2C3 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: TGGCAGTTCC
About this image
See OR2C3 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for OR2C3
SOURCE GeneReport for Unigene cluster: Hs.730218
SABiosciences Custom PCR Arrays for OR2C3
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for OR2C3
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse / rat OR2C3 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat OR2C3 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat OR2C3 | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for OR2C3 |
Orthologs
for OR2C3 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
--
ENSEMBL Gene Tree for OR2C3 (if available)
TreeFam Gene Tree for OR2C3 (if available) |
Paralogs
for OR2C3 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| Paralogs for OR2C3 gene
- OR2J22 OR2W12 OR2J12 OR2B112 OR2H22 OR2B22 OR2B32 OR2H12
- OR2C12 OR2Y12 OR2G22 OR2B62 OR2W32 OR2J32 OR2G32 OR2G62
18/450 SIMAP similar genes for OR2C3 using alignment to 1 protein entry: OR2C3_HUMAN(see all similar genes):OR2J3 OR2G2 OR2B8P OR2G3 OR2J1 OR2C1
OR2G6 OR2J4P OR2W1 OR2W6P 6M1-16 OLFR 42A
OR2B2 OR2H1 OR2J2 OR2B11 OR2H2 OR2Y1
OR2C3 for paralogs About GeneDecksing
|
Genomic Variants
for OR2C3 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 1 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
|---|
HapMap Linkage Disequilibrium report for OR2C3 ( 247694854 - 247695813 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 1 variation for OR2C3
1 CNV: 6816 | SABiosciences Cancer Mutation PCR Assays |
|
Disorders
/ Diseases
for OR2C3 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
OR2C3 for disorders About GeneDecksing
3  diseases for OR2C3: About MalaCardslymphoblastic leukemia neuronitis leukemia
Export disorders for OR2C3 gene to outside databases
|
Publications
for OR2C3 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for OR2C3 gene integrated from 9 sources:
(articles sorted by number of sources associating them with OR2C3) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414)1, 2 Gregory S.G.... Bentley D.R. (2006)
- The human olfactory receptor gene family. (PubMed id 14983052)1, 2 Malnic B.... Buck L.B. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
- Germline genomic variants associated with childhood a cute lymphoblastic leukemia. (PubMed id 19684603)1 TreviA+o L.R....Relling M.V. (2009)
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)
- DEFOG: a practical scheme for deciphering families of genes. (PubMed id 12213199)1 Fuchs T.... Shamir R. (2002)
- Hepatitis C virus core protein interacts with 14-3-3 protein and activates the kinase Raf-1. (PubMed id )2 Aoki H.... Hino O. (2000)
|
External Searches for OR2C3 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
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Genome Databases showing OR2C3 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing OR2C3 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing OR2C3 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for OR2C3 | Pharmacogenomics, SNPs, Pathways | | HORDE entry for OR2C3 | The Human Olfactory Receptor Data Explorer at the Weizmann Institute of Science |
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| | |
About This Section
| Patent Information for OR2C3 gene:
Search GeneIP for patents involving OR2C3
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for OR2C3 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
About This Section
|
 | |
 | |
 |
| | |  | Browse OriGene Antibodies | | Browse OriGene shRNA RFPs | | | OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for OR2C3 | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for OR2C3 | | | OriGene Protein Over-expression Lysate for OR2C3 | | Browse OriGene Fluorogenic Cell Assay Kits | | | Browse OriGene siRNAs | | Browse 3'-UTR reporter clones for miRNA target validation | | | OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for OR2C3 | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for OR2C3 | | | Browse OriGene GFP tagged cDNA clones in CMV expression vector | | Browse OriGene MicroRNA Expression Plasmids | | | Browse OriGene basic RS shRNAs | | Browse OriGene validated miRNA SYBR primer pairs | | | Browse OriGene full length recombinant human proteins expressed in human HEK293 cells | | OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling | | | OriGene Custom Antibody Services for OR2C3 | | OriGene Custom Protein Services for OR2C3 | | | OriGene Custom Immunoassay Development | | |
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| | | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat OR2C3 | | | Search QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing OR2C3 | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat OR2C3 | | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat OR2C3 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat OR2C3 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat OR2C3 |
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 |  |  |  | |
| | | | Search Tocris compounds for OR2C3 |
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 | | | OR2C3 Proteins, Antibodies, CLIAs, and ELISAs |
| | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for OR2C3 |
|  |  |  |  | | | | ThermoFisher Antibodies for OR2C3 |
| | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat OR2C3 |
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