Free for academic non-profit institutions. Other users need a Commercial license

Aliases for OR2B8P Gene

Aliases for OR2B8P Gene

  • Olfactory Receptor Family 2 Subfamily B Member 8 Pseudogene 2 3 5
  • Hs6M1-29P 3 4
  • OR2B8 3 4
  • Olfactory Receptor, Family 2, Subfamily B, Member 8 Pseudogene 2
  • Olfactory Receptor 2B8 3
  • DJ313I6.4 3
  • OR6-10 3

External Ids for OR2B8P Gene

Previous HGNC Symbols for OR2B8P Gene

  • OR2B8

Previous GeneCards Identifiers for OR2B8P Gene

  • GC06U900583
  • GC06M028128
  • GC06M028020

Summaries for OR2B8P Gene

Entrez Gene Summary for OR2B8P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR2B8P Gene

OR2B8P (Olfactory Receptor Family 2 Subfamily B Member 8 Pseudogene) is a Pseudogene. Among its related pathways are Signaling by GPCR and Olfactory Signaling Pathway. GO annotations related to this gene include G-protein coupled receptor activity and olfactory receptor activity.

UniProtKB/Swiss-Prot for OR2B8P Gene

  • Odorant receptor.

Additional gene information for OR2B8P Gene

No data available for CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR2B8P Gene

Genomics for OR2B8P Gene

Regulatory Elements for OR2B8P Gene

Enhancers for OR2B8P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H028079 1.2 ENCODE 29 -26.4 -26401 3 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC MEF2D ZNF603P ZKSCAN8 ZKSCAN3 ZSCAN12 ZSCAN9 OR2B8P ZKSCAN4 ZNF311 PGBD1 ZSCAN26
GH06H027862 1.6 Ensembl ENCODE dbSUPER 16.1 +185.6 185598 12 HNRNPUL1 PKNOX1 ARID4B SIN3A DMAP1 YY1 ZNF143 FOS PAF1 ZHX2 ZNF603P ZKSCAN3 ZKSCAN8 ZKSCAN4 OR2B8P ZSCAN12 ZSCAN9 ZSCAN23 ZSCAN26 HIST1H3J
GH06H028333 1.1 ENCODE dbSUPER 12.4 -279.2 -279182 0 BCOR HDGF PKNOX1 ARNT BACH1 NFXL1 ZNF316 NFE2 MAFK SMARCA5 ZKSCAN4 ZKSCAN8 ZNF603P ZKSCAN3 ZSCAN9 OR2B8P ZSCAN12 NKAPL OR2B7P ENSG00000270326
GH06H027591 1.4 Ensembl ENCODE 9.7 +461.4 461366 2 HDGF PKNOX1 MLX ARNT ARID4B SIN3A FEZF1 ZNF2 SLC30A9 ZNF766 ZSCAN12 ZSCAN23 ZKSCAN8 ZNF322 ZKSCAN3 ZSCAN26 PGBD1 ABT1 ZNF391 ZNF192P1
GH06H027887 1.8 FANTOM5 ENCODE dbSUPER 7.2 +160.8 160785 11 ZFP64 DMAP1 YY1 ZNF143 NFYC SSRP1 ZNF610 RCOR2 NBN NR2C1 ZKSCAN4 ZKSCAN8 ZKSCAN3 ZSCAN9 ZNF603P ZSCAN12 ZSCAN26 HIST1H4K HIST1H3H HIST1H2BN
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OR2B8P on UCSC Golden Path with GeneCards custom track

Genomic Location for OR2B8P Gene

Chromosome:
6
Start:
28,053,128 bp from pter
End:
28,054,265 bp from pter
Size:
1,138 bases
Orientation:
Minus strand

Genomic View for OR2B8P Gene

Genes around OR2B8P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR2B8P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR2B8P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR2B8P Gene

Proteins for OR2B8P Gene

  • Protein details for OR2B8P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P59922-OR2B8_HUMAN
    Recommended name:
    Putative olfactory receptor 2B8
    Protein Accession:
    P59922

    Protein attributes for OR2B8P Gene

    Size:
    312 amino acids
    Molecular mass:
    35019 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR2B8P Gene

Post-translational modifications for OR2B8P Gene

  • Glycosylation at posLast=55, posLast=195195, and Asn265

Other Protein References for OR2B8P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR2B8P Gene

Domains & Families for OR2B8P Gene

Gene Families for OR2B8P Gene

Protein Domains for OR2B8P Gene

Suggested Antigen Peptide Sequences for OR2B8P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P59922

UniProtKB/Swiss-Prot:

OR2B8_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with OR2B8P: view

Function for OR2B8P Gene

Molecular function for OR2B8P Gene

UniProtKB/Swiss-Prot Function:
Odorant receptor.

Phenotypes From GWAS Catalog for OR2B8P Gene

Gene Ontology (GO) - Molecular Function for OR2B8P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G-protein coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IBA --
genes like me logo Genes that share ontologies with OR2B8P: view

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for OR2B8P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR2B8P Gene

Localization for OR2B8P Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR2B8P Gene

Cell membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for OR2B8P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane IEA --
GO:0016021 integral component of membrane IBA --
genes like me logo Genes that share ontologies with OR2B8P: view

No data available for Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for OR2B8P Gene

Pathways & Interactions for OR2B8P Gene

genes like me logo Genes that share pathways with OR2B8P: view

Pathways by source for OR2B8P Gene

Interacting Proteins for OR2B8P Gene

Gene Ontology (GO) - Biological Process for OR2B8P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway IBA --
GO:0007608 sensory perception of smell IBA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR2B8P: view

No data available for SIGNOR curated interactions for OR2B8P Gene

Drugs & Compounds for OR2B8P Gene

No Compound Related Data Available

Transcripts for OR2B8P Gene

mRNA/cDNA for OR2B8P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for OR2B8P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for OR2B8P Gene

No ASD Table

Relevant External Links for OR2B8P Gene

GeneLoc Exon Structure for
OR2B8P
ECgene alternative splicing isoforms for
OR2B8P

Expression for OR2B8P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR2B8P Gene

mRNA differential expression in normal tissues according to GTEx for OR2B8P Gene

This gene is overexpressed in Testis (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of OR2B8P Gene:

OR2B8P
genes like me logo Genes that share expression patterns with OR2B8P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR2B8P Gene

Orthologs for OR2B8P Gene

Evolution for OR2B8P Gene

ENSEMBL:
Gene Tree for OR2B8P (if available)
TreeFam:
Gene Tree for OR2B8P (if available)

No data available for Orthologs for OR2B8P Gene

Paralogs for OR2B8P Gene

(444) SIMAP similar genes for OR2B8P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with OR2B8P: view

No data available for Paralogs for OR2B8P Gene

Variants for OR2B8P Gene

Relevant External Links for OR2B8P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR2B8P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR2B8P Gene

Disorders for OR2B8P Gene

Relevant External Links for OR2B8P

Genetic Association Database (GAD)
OR2B8P

No disorders were found for OR2B8P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR2B8P Gene

Publications for OR2B8P Gene

  1. The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall AJ … Beck S (Nature 2003) 3 4 60

Products for OR2B8P Gene

Sources for OR2B8P Gene

Content
Loading form....