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Aliases for OR2AT1P Gene

Aliases for OR2AT1P Gene

  • Olfactory Receptor Family 2 Subfamily AT Member 1 Pseudogene 2 3 5
  • Olfactory Receptor, Family 2, Subfamily AT, Member 1 Pseudogene 2

External Ids for OR2AT1P Gene

Previous GeneCards Identifiers for OR2AT1P Gene

  • GC11U990568
  • GC11M074563
  • GC11M074519
  • GC11M074842

Summaries for OR2AT1P Gene

Entrez Gene Summary for OR2AT1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR2AT1P Gene

OR2AT1P (Olfactory Receptor Family 2 Subfamily AT Member 1 Pseudogene) is a Pseudogene.

Additional gene information for OR2AT1P Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR2AT1P Gene

Genomics for OR2AT1P Gene

Regulatory Elements for OR2AT1P Gene

Enhancers for OR2AT1P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11H075398 1.2 ENCODE 14.6 -269.4 -269412 4.8 HDGF PKNOX1 MLX ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 POLD3 KLHL35 RNF169 RPS3 SERPINH1 ENSG00000254460 ENSG00000254630 OR2AT1P LOC283214 UVRAG
GH11H074747 1.1 ENCODE 14.6 +382.8 382821 2.9 HDGF PKNOX1 ARNT ZFP64 ARID4B SIN3A DMAP1 YBX1 ZNF2 YY1 XRRA1 ARPC3P4 RNF169 OR2AT1P ENSG00000254460 ENSG00000254630 RPS3 ENSG00000206913 C2CD3 POLD3
GH11H075103 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +28.1 28111 0.9 HDGF PKNOX1 ATF1 ARNT TCF12 ZNF766 GATA2 ELK1 FOS ATF7 XRRA1 ARRB1 SLCO2B1 OR2AT1P
GH11H075100 1.4 Ensembl ENCODE dbSUPER 0.3 +31.3 31276 1.2 HDAC1 ATF1 NFRKB BATF GATA2 FOS ATF7 CREM SMAD5 NCOA1 XRRA1 SLCO2B1 OR2AT1P
GH11H075105 1.1 ENCODE dbSUPER 0.3 +26.3 26310 0.8 HDAC1 PKNOX1 ATF1 TBL1XR1 ZNF766 EGR1 ATF7 CREM HCFC1 SMAD5 ENSG00000255395 SLCO2B1 OR2AT1P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around OR2AT1P on UCSC Golden Path with GeneCards custom track

Genomic Locations for OR2AT1P Gene

Genomic Locations for OR2AT1P Gene
778 bases
Minus strand

Genomic View for OR2AT1P Gene

Genes around OR2AT1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR2AT1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR2AT1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR2AT1P Gene

Proteins for OR2AT1P Gene

Post-translational modifications for OR2AT1P Gene

No Post-translational modifications

Other Protein References for OR2AT1P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR2AT1P Gene

Domains & Families for OR2AT1P Gene

Gene Families for OR2AT1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR2AT1P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR2AT1P Gene

Function for OR2AT1P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR2AT1P Gene

Localization for OR2AT1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for OR2AT1P Gene

Pathways & Interactions for OR2AT1P Gene

SuperPathways for OR2AT1P Gene

No Data Available

Interacting Proteins for OR2AT1P Gene

Gene Ontology (GO) - Biological Process for OR2AT1P Gene


No data available for Pathways by source and SIGNOR curated interactions for OR2AT1P Gene

Drugs & Compounds for OR2AT1P Gene

No Compound Related Data Available

Transcripts for OR2AT1P Gene

mRNA/cDNA for OR2AT1P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for OR2AT1P Gene

No ASD Table

Relevant External Links for OR2AT1P Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for OR2AT1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR2AT1P Gene

mRNA differential expression in normal tissues according to GTEx for OR2AT1P Gene

This gene is overexpressed in Testis (x20.5) and Brain - Putamen (basal ganglia) (x4.7).

NURSA nuclear receptor signaling pathways regulating expression of OR2AT1P Gene:

genes like me logo Genes that share expression patterns with OR2AT1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR2AT1P Gene

Orthologs for OR2AT1P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR2AT1P Gene

Organism Taxonomy Gene Similarity Type Details
(Mus musculus)
Mammalia Or2at1 52 Olfr521
  • chr7:99,767,047-99,768,126
Species where no ortholog for OR2AT1P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR2AT1P Gene

Gene Tree for OR2AT1P (if available)
Gene Tree for OR2AT1P (if available)

Paralogs for OR2AT1P Gene

No data available for Paralogs for OR2AT1P Gene

Variants for OR2AT1P Gene

Relevant External Links for OR2AT1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR2AT1P Gene

Disorders for OR2AT1P Gene

Relevant External Links for OR2AT1P

Genetic Association Database (GAD)

No disorders were found for OR2AT1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR2AT1P Gene

Publications for OR2AT1P Gene

  1. A genome-wide association study identifies IL23R as an inflammatory bowel disease gene. (PMID: 17068223) Duerr RH … Cho JH (Science (New York, N.Y.) 2006) 45 60

Products for OR2AT1P Gene

Sources for OR2AT1P Gene

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