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Aliases for OR2AF1P Gene

Subcategory (RNA class) for OR2AF1P Gene

lncRNA

Aliases for OR2AF1P Gene

  • Olfactory Receptor Family 2 Subfamily AF Member 1 Pseudogene 2 3 5
  • Olfactory Receptor, Family 2, Subfamily AF, Member 1 Pseudogene 2
  • Olfactory Receptor, Family 2, Subfamily AF, Member 2 Pseudogene 3
  • OR2AF2P 3

External Ids for OR2AF1P Gene

ORGUL Members for OR2AF1P Gene

Previous HGNC Symbols for OR2AF1P Gene

  • OR2AF2P

Previous GeneCards Identifiers for OR2AF1P Gene

  • GC0XU990348
  • GC0XP130478
  • GC0XP130580
  • GC0XP130752

Summaries for OR2AF1P Gene

Entrez Gene Summary for OR2AF1P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR2AF1P Gene

OR2AF1P (Olfactory Receptor Family 2 Subfamily AF Member 1 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR2AF1P Gene

Genomics for OR2AF1P Gene

Genomic Location for OR2AF1P Gene

Chromosome:
X
Start:
131,619,021 bp from pter
End:
131,619,936 bp from pter
Size:
916 bases
Orientation:
Plus strand

Genomic View for OR2AF1P Gene

Genes around OR2AF1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
OR2AF1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for OR2AF1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR2AF1P Gene

No data available for Regulatory Elements for OR2AF1P Gene

Proteins for OR2AF1P Gene

Post-translational modifications for OR2AF1P Gene

No Post-translational modifications

Other Protein References for OR2AF1P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR2AF1P Gene

Domains & Families for OR2AF1P Gene

Gene Families for OR2AF1P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR2AF1P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR2AF1P Gene

Function for OR2AF1P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for OR2AF1P Gene

Localization for OR2AF1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for OR2AF1P Gene

Pathways & Interactions for OR2AF1P Gene

SuperPathways for OR2AF1P Gene

No Data Available

Interacting Proteins for OR2AF1P Gene

Gene Ontology (GO) - Biological Process for OR2AF1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for OR2AF1P Gene

Drugs & Compounds for OR2AF1P Gene

No Compound Related Data Available

Transcripts for OR2AF1P Gene

mRNA/cDNA for OR2AF1P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR2AF1P Gene

No ASD Table

Relevant External Links for OR2AF1P Gene

GeneLoc Exon Structure for
OR2AF1P
ECgene alternative splicing isoforms for
OR2AF1P

Expression for OR2AF1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for OR2AF1P Gene

NURSA nuclear receptor signaling pathways regulating expression of OR2AF1P Gene:

OR2AF1P
genes like me logo Genes that share expression patterns with OR2AF1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR2AF1P Gene

Orthologs for OR2AF1P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR2AF1P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Or13ae2 55 Olfr1325
  • chrX:74,594,328-74,595,272
Species where no ortholog for OR2AF1P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR2AF1P Gene

ENSEMBL:
Gene Tree for OR2AF1P (if available)
TreeFam:
Gene Tree for OR2AF1P (if available)

Paralogs for OR2AF1P Gene

No data available for Paralogs for OR2AF1P Gene

Variants for OR2AF1P Gene

Relevant External Links for OR2AF1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
OR2AF1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for OR2AF1P Gene

Disorders for OR2AF1P Gene

Relevant External Links for OR2AF1P

Genetic Association Database (GAD)
OR2AF1P

No disorders were found for OR2AF1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR2AF1P Gene

Publications for OR2AF1P Gene

  1. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox C.S. … Atwood L.D. (BMC Med. Genet. 2007) 46 64

Products for OR2AF1P Gene

Sources for OR2AF1P Gene

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