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Aliases for OR2A20P Gene

Aliases for OR2A20P Gene

  • Olfactory Receptor, Family 2, Subfamily A, Member 20 Pseudogene 2 3
  • OR2A20 3

External Ids for OR2A20P Gene

Previous HGNC Symbols for OR2A20P Gene

  • OR2A20

Previous GeneCards Identifiers for OR2A20P Gene

  • GC07P143284
  • GC07P143432
  • GC07M143385
  • GC07M143579
  • GC07M143581
  • GC07M143583
  • GC07M143584
  • GC07M143585
  • GC07M143947

Summaries for OR2A20P Gene

Entrez Gene Summary for OR2A20P Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR2A20P Gene

OR2A20P (Olfactory Receptor, Family 2, Subfamily A, Member 20 Pseudogene) is a Pseudogene. Among its related pathways are GPCRs, Other.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR2A20P Gene

Genomics for OR2A20P Gene

Regulatory Elements for OR2A20P Gene

Genomic Location for OR2A20P Gene

Start:
144,250,045 bp from pter
End:
144,252,957 bp from pter
Size:
2,913 bases
Orientation:
Minus strand

Genomic View for OR2A20P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for OR2A20P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR2A20P Gene

Proteins for OR2A20P Gene

Post-translational modifications for OR2A20P Gene

No Post-translational modifications

Other Protein References for OR2A20P Gene

HORDE protein sequence:

No data available for DME Specific Peptides for OR2A20P Gene

Domains for OR2A20P Gene

Gene Families for OR2A20P Gene

HGNC:
  • OR2 :GPCR / Class A : Olfactory receptors

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with OR2A20P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for OR2A20P Gene

Function for OR2A20P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for OR2A20P Gene

Localization for OR2A20P Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for OR2A20P Gene COMPARTMENTS Subcellular localization image for OR2A20P gene
Compartment Confidence
plasma membrane 3

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for OR2A20P Gene

Pathways for OR2A20P Gene

SuperPathways for OR2A20P Gene

Superpath Contained pathways
1 GPCRs, Other
genes like me logo Genes that share pathways with OR2A20P: view

Pathways by source for OR2A20P Gene

1 BioSystems pathway for OR2A20P Gene

Interacting Proteins for OR2A20P Gene

Gene Ontology (GO) - Biological Process for OR2A20P Gene

None

Transcripts for OR2A20P Gene

mRNA/cDNA for OR2A20P Gene

(176) Selected AceView cDNA sequences:
(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for OR2A20P Gene

Olfactory receptor, family 2, subfamily A, member 20 pseudogene:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for OR2A20P

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for OR2A20P Gene

No ASD Table

Relevant External Links for OR2A20P Gene

GeneLoc Exon Structure for
OR2A20P
ECgene alternative splicing isoforms for
OR2A20P

Expression for OR2A20P Gene

mRNA expression in normal human tissues for OR2A20P Gene

SOURCE GeneReport for Unigene cluster for OR2A20P Gene Hs.490448

genes like me logo Genes that share expressions with OR2A20P: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for OR2A20P Gene

Orthologs for OR2A20P Gene

Evolution for OR2A20P Gene

ENSEMBL:
Gene Tree for OR2A20P (if available)
TreeFam:
Gene Tree for OR2A20P (if available)

No data available for Orthologs for OR2A20P Gene

Paralogs for OR2A20P Gene

No data available for Paralogs for OR2A20P Gene

Variants for OR2A20P Gene

Sequence variations from dbSNP and Humsavar for OR2A20P Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs1132518 -- 144,252,844(+) ATAAA(G/T)GAACA upstream-variant-2KB
rs199507826 -- 144,251,917(+) CCAAC(A/G)GAAGG upstream-variant-2KB
rs200254318 -- 144,252,687(+) AGTAA(A/T)ATCTC upstream-variant-2KB
rs200477057 -- 144,250,343(+) GGGAC(A/G)CAGAG downstream-variant-500B
rs201204651 -- 144,252,688(+) GTAAA(A/T)TCTCT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for OR2A20P Gene

Variant ID Type Subtype PubMed ID
nsv428188 CNV Gain+Loss 18775914
dgv2148e1 CNV Complex 17122850
nsv8227 CNV Gain+Loss 18304495
esv1682998 OTHER Inversion 17803354
dgv7520n71 CNV Gain 21882294
dgv2149e1 CNV Complex 17122850
dgv2150e1 CNV Complex 17122850
essv3984 CNV CNV 17122850
nsv7411 OTHER Inversion 18451855
dgv7522n71 CNV Gain 21882294
dgv7523n71 CNV Gain 21882294
dgv7524n71 CNV Gain+Loss 21882294
esv1003295 OTHER Inversion 20482838
dgv7525n71 CNV Loss 21882294
nsv821609 CNV Duplication 20802225
nsv824360 CNV Gain 20364138
dgv24n31 CNV Duplication 19718026
nsv819701 CNV Insertion 19587683
esv24292 CNV Gain+Loss 19812545
nsv831175 CNV Loss 17160897
esv33253 CNV Gain 17666407
nsv433394 CNV Gain 18776910
nsv508489 CNV Loss 20534489
nsv469769 CNV Complex 16826518
nsv471646 CNV Gain+Loss 15918152
dgv7526n71 CNV Gain 21882294
nsv510970 OTHER Inversion 20534489
esv8347 OTHER Inversion 19470904
dgv7527n71 CNV Loss 21882294
nsv889373 CNV Loss 21882294

Relevant External Links for OR2A20P Gene

HapMap Linkage Disequilibrium report
OR2A20P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for OR2A20P Gene

Disorders for OR2A20P Gene

No disorders were found for OR2A20P Gene.

No data available for UniProtKB/Swiss-Prot for OR2A20P Gene

Publications for OR2A20P Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. The human olfactory receptor gene family. (PMID: 14983052) Malnic B. … Buck L.B. (Proc. Natl. Acad. Sci. U.S.A. 2004) 3

Products for OR2A20P Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate OR2A20P
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for OR2A20P
    • Block miRNA regulation of OR2A20P using miScript Target Protectors

    Sources for OR2A20P Gene

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