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Aliases for OR13G1 Gene

Aliases for OR13G1 Gene

  • Olfactory Receptor, Family 13, Subfamily G, Member 1 2 3
  • Olfactory Receptor OR1-37 3 4
  • Olfactory Receptor 13G1 3
  • OR1-37 3

External Ids for OR13G1 Gene

Summaries for OR13G1 Gene

Entrez Gene Summary for OR13G1 Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR13G1 Gene

OR13G1 (Olfactory Receptor, Family 13, Subfamily G, Member 1) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Signaling by GPCR. GO annotations related to this gene include G-protein coupled receptor activity and olfactory receptor activity. An important paralog of this gene is OR13A1.

UniProtKB/Swiss-Prot for OR13G1 Gene

  • Odorant receptor.

Gene Wiki entry for OR13G1 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR13G1 Gene

Genomics for OR13G1 Gene

Genomic Location for OR13G1 Gene

Start:
247,672,118 bp from pter
End:
247,673,041 bp from pter
Size:
924 bases
Orientation:
Minus strand

Genomic View for OR13G1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for OR13G1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR13G1 Gene

Regulatory Elements for OR13G1 Gene

Proteins for OR13G1 Gene

  • Protein details for OR13G1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NGZ3-O13G1_HUMAN
    Recommended name:
    Olfactory receptor 13G1
    Protein Accession:
    Q8NGZ3
    Secondary Accessions:
    • B2RN80
    • Q5T2T2
    • Q6IF86

    Protein attributes for OR13G1 Gene

    Size:
    307 amino acids
    Molecular mass:
    34672 Da
    Quaternary structure:
    No Data Available

neXtProt entry for OR13G1 Gene

Proteomics data for OR13G1 Gene at MOPED

Post-translational modifications for OR13G1 Gene

  • Modification sites at PhosphoSitePlus
  • Glycosylation at Asn2

Other Protein References for OR13G1 Gene

ENSEMBL proteins:
Reactome Protein details:
REFSEQ proteins:

No data available for DME Specific Peptides for OR13G1 Gene

Domains for OR13G1 Gene

Gene Families for OR13G1 Gene

HGNC:
  • OR13 :GPCR / Class A : Olfactory receptors

Protein Domains for OR13G1 Gene

UniProtKB/Swiss-Prot:

O13G1_HUMAN
Family:
  • Belongs to the G-protein coupled receptor 1 family.:
    • Q8NGZ3
genes like me logo Genes that share domains with OR13G1: view

Function for OR13G1 Gene

Molecular function for OR13G1 Gene

UniProtKB/Swiss-Prot Function: Odorant receptor.

Gene Ontology (GO) - Molecular Function for OR13G1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004888 transmembrane signaling receptor activity IBA --
GO:0004930 G-protein coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IEA --
genes like me logo Genes that share ontologies with OR13G1: view

Phenotypes for OR13G1 Gene

genes like me logo Genes that share phenotypes with OR13G1: view

No data available for Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for OR13G1 Gene

Localization for OR13G1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR13G1 Gene

Cell membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for OR13G1 Gene COMPARTMENTS Subcellular localization image for OR13G1 gene
Compartment Confidence
plasma membrane 5

Gene Ontology (GO) - Cellular Components for OR13G1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0016021 integral component of membrane IBA --
genes like me logo Genes that share ontologies with OR13G1: view

Pathways for OR13G1 Gene

genes like me logo Genes that share pathways with OR13G1: view

Pathways by source for OR13G1 Gene

Interacting Proteins for OR13G1 Gene

Gene Ontology (GO) - Biological Process for OR13G1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway IBA --
GO:0050907 detection of chemical stimulus involved in sensory perception IBA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR13G1: view

Transcripts for OR13G1 Gene

mRNA/cDNA for OR13G1 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR13G1 Gene

No ASD Table

Relevant External Links for OR13G1 Gene

GeneLoc Exon Structure for
OR13G1
ECgene alternative splicing isoforms for
OR13G1

Expression for OR13G1 Gene

mRNA expression in normal human tissues for OR13G1 Gene

mRNA differential expression in normal tissues according to GTEx for OR13G1 Gene

This gene is overexpressed in Testis (27.7).

SOURCE GeneReport for Unigene cluster for OR13G1 Gene Hs.553834

genes like me logo Genes that share expressions with OR13G1: view

Orthologs for OR13G1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for OR13G1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC469749 36
  • 99.24 (n)
  • 98.37 (a)
OR13G1 37
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia -- 37
  • 52 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia OR13G1 36
  • 85.45 (n)
  • 82.41 (a)
OR13G1 37
  • 82 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Olfr309 36
  • 84.42 (n)
  • 84.97 (a)
Olfr309 16
Olfr309 37
  • 84 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia OR13G1 37
  • 76 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Olr12 36
  • 83.12 (n)
  • 85.95 (a)
lizard
(Anolis carolinensis)
Reptilia -- 37
  • 46 (a)
OneToMany
-- 37
  • 45 (a)
OneToMany
Species with no ortholog for OR13G1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR13G1 Gene

ENSEMBL:
Gene Tree for OR13G1 (if available)
TreeFam:
Gene Tree for OR13G1 (if available)

Paralogs for OR13G1 Gene

Paralogs for OR13G1 Gene

Selected SIMAP similar genes for OR13G1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with OR13G1: view

Variants for OR13G1 Gene

Sequence variations from dbSNP and Humsavar for OR13G1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs1151639 -- 247,673,816(-) GGCCA(A/G)TCTAT upstream-variant-2KB
rs1151640 - 247,672,648(-) GTACT(A/G)TTATG reference, missense
rs1151641 -- 247,672,050(+) AAAAA(C/T)CAGTA downstream-variant-500B
rs1151658 -- 247,674,581(-) GTATG(A/G)GTAAA upstream-variant-2KB
rs1151659 -- 247,674,832(-) GTAGA(A/G)AGGTG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for OR13G1 Gene

Variant ID Type Subtype PubMed ID
esv33129 CNV Gain+Loss 17666407
nsv873440 CNV Gain 21882294
dgv204e1 CNV Complex 17122850
esv34503 CNV Gain 17911159
nsv515858 CNV Gain+Loss 19592680
nsv5310 CNV Loss 18451855

Relevant External Links for OR13G1 Gene

HapMap Linkage Disequilibrium report
OR13G1
Human Gene Mutation Database (HGMD)
OR13G1

Disorders for OR13G1 Gene

Relevant External Links for OR13G1

Genetic Association Database (GAD)
OR13G1
Human Genome Epidemiology (HuGE) Navigator
OR13G1
genes like me logo Genes that share disorders with OR13G1: view

No data available for UniProtKB/Swiss-Prot for OR13G1 Gene

Publications for OR13G1 Gene

  1. Replication study of 10 genetic polymorphisms associated with coronary heart disease in a specific high-risk population with familial hypercholesterolemia. (PMID: 18599554) van der Net J.B. … Sijbrands E.J. (Eur. Heart J. 2008) 3 23 49
  2. The human olfactory receptor gene family. (PMID: 14983052) Malnic B. … Buck L.B. (Proc. Natl. Acad. Sci. U.S.A. 2004) 3 4
  3. Identification of four gene variants associated with myocardial infarction. (PMID: 16175505) Shiffman D. … Kane J.P. (Am. J. Hum. Genet. 2005) 3 49
  4. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4
  5. Association of gene variants with incident myocardial infarction in the Cardiovascular Health Study. (PMID: 17975119) Shiffman D. … Psaty B.M. (Arterioscler. Thromb. Vasc. Biol. 2008) 3 49

Products for OR13G1 Gene

  • antibodies-online peptides for OR13G1
  • antibodies-online antibodies for OR13G1
  • antibodies-online kits for OR13G1

Sources for OR13G1 Gene

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